RNA–Protein interactions for RNA: ENST00000409772.5

PDE6D-202, Transcript of phosphodiesterase 6D, humanhuman

TSL 3 BASIC

Gene PDE6D, Length 672 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-202ENST00000409772 MIGA2Q7L4E1 593 aa20.8■□□□□ 0.92
PDE6D-202ENST00000409772 TEX11Q8IYF3 940 aa20.8■□□□□ 0.92
PDE6D-202ENST00000409772 GPATCH3Q96I76 525 aa20.8■□□□□ 0.92
PDE6D-202ENST00000409772 CRBNQ96SW2 442 aa20.8■□□□□ 0.92
PDE6D-202ENST00000409772 MKRN3Q13064 507 aaKnown RBP20.79■□□□□ 0.92
PDE6D-202ENST00000409772 PICALMQ13492 652 aa20.79■□□□□ 0.92
PDE6D-202ENST00000409772 VGLL4Q14135 290 aa20.79■□□□□ 0.92
PDE6D-202ENST00000409772 ERO1BQ86YB8 467 aa20.79■□□□□ 0.92
PDE6D-202ENST00000409772 DHX36Q9H2U1 1008 aaKnown RBP20.79■□□□□ 0.92
PDE6D-202ENST00000409772 ELP3Q9H9T3 547 aa20.79■□□□□ 0.92
PDE6D-202ENST00000409772 AATFQ9NY61 560 aaKnown RBP eCLIP20.79■□□□□ 0.92
PDE6D-202ENST00000409772 ZNF112Q9UJU3 913 aa20.79■□□□□ 0.92
PDE6D-202ENST00000409772 PCDHB15Q9Y5E8 787 aa20.79■□□□□ 0.92
PDE6D-202ENST00000409772 GTF2A2P52657 109 aa20.78■□□□□ 0.92
PDE6D-202ENST00000409772 ZFPM1Q8IX07 1006 aa20.78■□□□□ 0.92
PDE6D-202ENST00000409772 OPTNQ96CV9 577 aa20.78■□□□□ 0.92
PDE6D-202ENST00000409772 TBC1D12O60347 775 aa20.77■□□□□ 0.92
PDE6D-202ENST00000409772 MAP3K10Q02779 954 aa20.77■□□□□ 0.92
PDE6D-202ENST00000409772 TNS4Q8IZW8 715 aa20.77■□□□□ 0.92
PDE6D-202ENST00000409772 MAGEB6Q8N7X4 407 aa20.77■□□□□ 0.92
PDE6D-202ENST00000409772 DNAJC2Q99543 621 aaKnown RBP20.77■□□□□ 0.92
PDE6D-202ENST00000409772 SH3RF3Q8TEJ3 882 aaPredicted RBP20.76■□□□□ 0.91
PDE6D-202ENST00000409772 ZKSCAN4Q969J2 545 aaPredicted RBP20.76■□□□□ 0.91
PDE6D-202ENST00000409772 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.76■□□□□ 0.91
PDE6D-202ENST00000409772 ANTXR1Q9H6X2 564 aa20.76■□□□□ 0.91
PDE6D-202ENST00000409772 DDX4Q9NQI0 724 aaKnown RBP20.76■□□□□ 0.91
PDE6D-202ENST00000409772 ECHDC1Q9NTX5 307 aa20.76■□□□□ 0.91
PDE6D-202ENST00000409772 PAG1Q9NWQ8 432 aa20.76■□□□□ 0.91
PDE6D-202ENST00000409772 ATRNL1Q5VV63 1379 aa20.75■□□□□ 0.91
PDE6D-202ENST00000409772 DDTLA6NHG4 134 aaPredicted RBP20.75■□□□□ 0.91
PDE6D-202ENST00000409772 SPDYE5A6NIY4 337 aa20.75■□□□□ 0.91
PDE6D-202ENST00000409772 GOLIM4O00461 696 aa20.75■□□□□ 0.91
PDE6D-202ENST00000409772 SMARCA5O60264 1052 aaPredicted RBP20.75■□□□□ 0.91
PDE6D-202ENST00000409772 PPATQ06203 517 aa20.75■□□□□ 0.91
PDE6D-202ENST00000409772 SLC9C2Q5TAH2 1124 aa20.75■□□□□ 0.91
PDE6D-202ENST00000409772 GCC1Q96CN9 775 aa20.75■□□□□ 0.91
PDE6D-202ENST00000409772 HAUS7Q99871 368 aa20.75■□□□□ 0.91
PDE6D-202ENST00000409772 OSBPL5Q9H0X9 879 aaPredicted RBP20.75■□□□□ 0.91
PDE6D-202ENST00000409772 BOLA2Q9H3K6 86 aa20.75■□□□□ 0.91
PDE6D-202ENST00000409772 PI4KBQ9UBF8 816 aa20.75■□□□□ 0.91
PDE6D-202ENST00000409772 TSKSQ9UJT2 592 aa20.75■□□□□ 0.91
PDE6D-202ENST00000409772 RFX7Q2KHR2 1363 aa20.74■□□□□ 0.91
PDE6D-202ENST00000409772 TESPA1A2RU30 521 aaPredicted RBP20.74■□□□□ 0.91
PDE6D-202ENST00000409772 HDAC1Q13547 482 aaPredicted RBP20.74■□□□□ 0.91
PDE6D-202ENST00000409772 NOL9Q5SY16 702 aaKnown RBP20.74■□□□□ 0.91
PDE6D-202ENST00000409772 ZSCAN25Q6NSZ9 544 aa20.74■□□□□ 0.91
PDE6D-202ENST00000409772 IFNL1Q8IU54 200 aa20.74■□□□□ 0.91
PDE6D-202ENST00000409772 TGFBRAP1Q8WUH2 860 aa20.74■□□□□ 0.91
PDE6D-202ENST00000409772 OTUD5Q96G74 571 aa20.74■□□□□ 0.91
PDE6D-202ENST00000409772 CFHR5Q9BXR6 569 aa20.74■□□□□ 0.91
PDE6D-202ENST00000409772 HERC5Q9UII4 1024 aaKnown RBP20.74■□□□□ 0.91
PDE6D-202ENST00000409772 NDUFB9Q9Y6M9 179 aa20.74■□□□□ 0.91
PDE6D-202ENST00000409772 COL2A1P02458 1487 aaPredicted RBP20.74■□□□□ 0.91
PDE6D-202ENST00000409772 CTNND1O60716 968 aaKnown RBP20.73■□□□□ 0.91
PDE6D-202ENST00000409772 CETPP11597 493 aa20.73■□□□□ 0.91
PDE6D-202ENST00000409772 PPIL2Q13356 520 aa20.73■□□□□ 0.91
PDE6D-202ENST00000409772 NOM1Q5C9Z4 860 aaKnown RBP20.73■□□□□ 0.91
PDE6D-202ENST00000409772 SH3BP5LQ7L8J4 393 aa20.73■□□□□ 0.91
PDE6D-202ENST00000409772 ADGRA1Q86SQ6 560 aa20.73■□□□□ 0.91
PDE6D-202ENST00000409772 FOXP4Q8IVH2 680 aaPredicted RBP20.73■□□□□ 0.91
PDE6D-202ENST00000409772 RWDD1Q9H446 243 aaPredicted RBP20.73■□□□□ 0.91
PDE6D-202ENST00000409772 PICK1Q9NRD5 415 aa20.73■□□□□ 0.91
PDE6D-202ENST00000409772 SUPT16HQ9Y5B9 1047 aaKnown RBP20.73■□□□□ 0.91
PDE6D-202ENST00000409772 SNCAIPQ9Y6H5 919 aa20.73■□□□□ 0.91
PDE6D-202ENST00000409772 ERC2O15083 957 aa20.72■□□□□ 0.91
PDE6D-202ENST00000409772 INPP5BP32019 993 aa20.72■□□□□ 0.91
PDE6D-202ENST00000409772 SNAPC2Q13487 334 aa20.72■□□□□ 0.91
PDE6D-202ENST00000409772 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.72■□□□□ 0.91
PDE6D-202ENST00000409772 MAGEB6P1A0A0J9YX57 407 aa20.71■□□□□ 0.91
PDE6D-202ENST00000409772 PHF20L1A8MW92 1017 aa20.71■□□□□ 0.91
PDE6D-202ENST00000409772 HLA-DOAP06340 250 aa20.71■□□□□ 0.91
PDE6D-202ENST00000409772 PDE6AP16499 860 aa20.71■□□□□ 0.91
PDE6D-202ENST00000409772 GJA5P36382 358 aa20.71■□□□□ 0.91
PDE6D-202ENST00000409772 USP5P45974 858 aa20.71■□□□□ 0.91
PDE6D-202ENST00000409772 LRRFIP1Q32MZ4 808 aaKnown RBP20.71■□□□□ 0.91
PDE6D-202ENST00000409772 MS4A4AQ96JQ5 239 aa20.71■□□□□ 0.91
PDE6D-202ENST00000409772 TRIM34Q9BYJ4 488 aa20.71■□□□□ 0.91
PDE6D-202ENST00000409772 MAST2Q6P0Q8 1798 aa20.71■□□□□ 0.91
PDE6D-202ENST00000409772 CCL15-CCL14A0A0B4J2E2 113 aa20.7■□□□□ 0.9
PDE6D-202ENST00000409772 CCL15Q16663 113 aa20.7■□□□□ 0.9
PDE6D-202ENST00000409772 MAPKAPK5Q8IW41 473 aa20.7■□□□□ 0.9
PDE6D-202ENST00000409772 SCYL3Q8IZE3 742 aa20.7■□□□□ 0.9
PDE6D-202ENST00000409772 MIGA1Q8NAN2 632 aa20.7■□□□□ 0.9
PDE6D-202ENST00000409772 TTC41PQ6P2S7 1318 aa20.7■□□□□ 0.9
PDE6D-202ENST00000409772 IRF6O14896 467 aa20.69■□□□□ 0.9
PDE6D-202ENST00000409772 TBC1D8O95759 1140 aa20.69■□□□□ 0.9
PDE6D-202ENST00000409772 DYNLL1P63167 89 aaKnown RBP20.69■□□□□ 0.9
PDE6D-202ENST00000409772 ANKRD45Q5TZF3 282 aa20.69■□□□□ 0.9
PDE6D-202ENST00000409772 CRNKL1Q9BZJ0 848 aaKnown RBP20.69■□□□□ 0.9
PDE6D-202ENST00000409772 ZCCHC17Q9NP64 241 aaKnown RBP20.69■□□□□ 0.9
PDE6D-202ENST00000409772 FLT1P17948 1338 aa20.69■□□□□ 0.9
PDE6D-202ENST00000409772 ZNF532Q9HCE3 1301 aa20.69■□□□□ 0.9
PDE6D-202ENST00000409772 CXCL11O14625 94 aa20.68■□□□□ 0.9
PDE6D-202ENST00000409772 UBE3CQ15386 1083 aa20.68■□□□□ 0.9
PDE6D-202ENST00000409772 TTC6Q86TZ1 520 aa20.68■□□□□ 0.9
PDE6D-202ENST00000409772 CRACR2BQ8N4Y2 399 aaPredicted RBP20.68■□□□□ 0.9
PDE6D-202ENST00000409772 CNKSR2Q8WXI2 1034 aa20.68■□□□□ 0.9
PDE6D-202ENST00000409772 TBC1D2Q9BYX2 928 aa20.68■□□□□ 0.9
PDE6D-202ENST00000409772 MYO5AQ9Y4I1 1855 aaKnown RBP20.68■□□□□ 0.9
PDE6D-202ENST00000409772 OTOFQ9HC10 1997 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms