RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 PLCL1Q15111 1095 aa7.77□□□□□ -1.17
CLK1-203ENST00000409769 TMC7Q7Z402 723 aa7.77□□□□□ -1.17
CLK1-203ENST00000409769 SULF2Q8IWU5 870 aa7.77□□□□□ -1.17
CLK1-203ENST00000409769 POU5F2Q8N7G0 328 aa7.77□□□□□ -1.17
CLK1-203ENST00000409769 SRCIN1Q9C0H9 1055 aa7.77□□□□□ -1.17
CLK1-203ENST00000409769 LGR6Q9HBX8 967 aa7.77□□□□□ -1.17
CLK1-203ENST00000409769 BIN2Q9UBW5 565 aaPredicted RBP7.77□□□□□ -1.17
CLK1-203ENST00000409769 SAMM50Q9Y512 469 aa7.77□□□□□ -1.17
CLK1-203ENST00000409769 RNGTTO60942 597 aaKnown RBP7.76□□□□□ -1.17
CLK1-203ENST00000409769 NME2P22392 152 aa7.76□□□□□ -1.17
CLK1-203ENST00000409769 ARNTP27540 789 aa7.76□□□□□ -1.17
CLK1-203ENST00000409769 PRKCQQ04759 706 aa7.76□□□□□ -1.17
CLK1-203ENST00000409769 CDK5R2Q13319 367 aa7.76□□□□□ -1.17
CLK1-203ENST00000409769 IFI16Q16666 785 aaKnown RBP7.76□□□□□ -1.17
CLK1-203ENST00000409769 OGFOD2Q6N063 350 aa7.76□□□□□ -1.17
CLK1-203ENST00000409769 ARHGAP27Q6ZUM4 889 aa7.75□□□□□ -1.17
CLK1-203ENST00000409769 RNF214Q8ND24 703 aa7.75□□□□□ -1.17
CLK1-203ENST00000409769 FBF1Q8TES7 1133 aa7.75□□□□□ -1.17
CLK1-203ENST00000409769 TMEM265A0A087WTH1 108 aa7.74□□□□□ -1.17
CLK1-203ENST00000409769 TREHO43280 583 aa7.74□□□□□ -1.17
CLK1-203ENST00000409769 HCLS1P14317 486 aaPredicted RBP7.74□□□□□ -1.17
CLK1-203ENST00000409769 FUT4P22083 530 aa7.74□□□□□ -1.17
CLK1-203ENST00000409769 PLCB3Q01970 1234 aa7.74□□□□□ -1.17
CLK1-203ENST00000409769 DSC3Q14574 896 aa7.74□□□□□ -1.17
CLK1-203ENST00000409769 ENOX2Q16206 610 aaKnown RBP7.74□□□□□ -1.17
CLK1-203ENST00000409769 ZNF792Q3KQV3 632 aa7.74□□□□□ -1.17
CLK1-203ENST00000409769 ZC3H12AQ5D1E8 599 aaKnown RBP7.74□□□□□ -1.17
CLK1-203ENST00000409769 SCARA3Q6AZY7 606 aa7.74□□□□□ -1.17
CLK1-203ENST00000409769 DUSP23Q9BVJ7 150 aa7.74□□□□□ -1.17
CLK1-203ENST00000409769 CEP44Q9C0F1 390 aa7.74□□□□□ -1.17
CLK1-203ENST00000409769 SSU72Q9NP77 194 aaKnown RBP7.74□□□□□ -1.17
CLK1-203ENST00000409769 PPM1HQ9ULR3 514 aa7.74□□□□□ -1.17
CLK1-203ENST00000409769 AKAP2Q9Y2D5 859 aa7.74□□□□□ -1.17
CLK1-203ENST00000409769 CEACAM5P06731 702 aa7.73□□□□□ -1.17
CLK1-203ENST00000409769 GSTT1P30711 240 aa7.73□□□□□ -1.17
CLK1-203ENST00000409769 FZD5Q13467 585 aa7.73□□□□□ -1.17
CLK1-203ENST00000409769 ATG4DQ86TL0 474 aaPredicted RBP7.73□□□□□ -1.17
CLK1-203ENST00000409769 WFDC3Q8IUB2 231 aa7.73□□□□□ -1.17
CLK1-203ENST00000409769 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.73□□□□□ -1.17
CLK1-203ENST00000409769 PLD6Q8N2A8 252 aaKnown RBP7.73□□□□□ -1.17
CLK1-203ENST00000409769 HRASLS5Q96KN8 279 aa7.73□□□□□ -1.17
CLK1-203ENST00000409769 PNMA6FA0A0J9YX94 578 aa7.72□□□□□ -1.17
CLK1-203ENST00000409769 GIPC1O14908 333 aa7.72□□□□□ -1.17
CLK1-203ENST00000409769 PAPLNO95428 1278 aa7.72□□□□□ -1.17
CLK1-203ENST00000409769 ZNF252P-AS1Q0IIN9 211 aa7.72□□□□□ -1.17
CLK1-203ENST00000409769 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.72□□□□□ -1.17
CLK1-203ENST00000409769 MAP1SQ66K74 1059 aaPredicted RBP7.72□□□□□ -1.17
CLK1-203ENST00000409769 NXPE4Q6UWF7 544 aa7.72□□□□□ -1.17
CLK1-203ENST00000409769 PI16Q6UXB8 463 aa7.72□□□□□ -1.17
CLK1-203ENST00000409769 ZNF574Q6ZN55 896 aaPredicted RBP7.72□□□□□ -1.17
CLK1-203ENST00000409769 SPRED2Q7Z698 418 aa7.72□□□□□ -1.17
CLK1-203ENST00000409769 ANKRD24Q8TF21 1146 aa7.72□□□□□ -1.17
CLK1-203ENST00000409769 ISL2Q96A47 359 aa7.72□□□□□ -1.17
CLK1-203ENST00000409769 ACSBG1Q96GR2 724 aa7.72□□□□□ -1.17
CLK1-203ENST00000409769 ASB16Q96NS5 453 aa7.72□□□□□ -1.17
CLK1-203ENST00000409769 NECAB3Q96P71 396 aaPredicted RBP7.72□□□□□ -1.17
CLK1-203ENST00000409769 CACNA2D2Q9NY47 1150 aa7.72□□□□□ -1.17
CLK1-203ENST00000409769 SNX11Q9Y5W9 270 aa7.72□□□□□ -1.17
CLK1-203ENST00000409769 MAPK1P28482 360 aa7.71□□□□□ -1.18
CLK1-203ENST00000409769 ZSCAN29Q8IWY8 852 aaPredicted RBP7.71□□□□□ -1.18
CLK1-203ENST00000409769 GTF2IRD1Q9UHL9 959 aa7.71□□□□□ -1.18
CLK1-203ENST00000409769 TRIM37O94972 964 aa7.7□□□□□ -1.18
CLK1-203ENST00000409769 NEFMP07197 916 aa7.7□□□□□ -1.18
CLK1-203ENST00000409769 CD8BP10966 210 aa7.7□□□□□ -1.18
CLK1-203ENST00000409769 OXCT1P55809 520 aa7.7□□□□□ -1.18
CLK1-203ENST00000409769 BNIP3Q12983 259 aa7.7□□□□□ -1.18
CLK1-203ENST00000409769 LRRC14Q15048 493 aa7.7□□□□□ -1.18
CLK1-203ENST00000409769 FAM181AQ8N9Y4 354 aa7.7□□□□□ -1.18
CLK1-203ENST00000409769 KCT2Q8NC54 265 aa7.7□□□□□ -1.18
CLK1-203ENST00000409769 GPBAR1Q8TDU6 330 aa7.7□□□□□ -1.18
CLK1-203ENST00000409769 CBX8Q9HC52 389 aa7.7□□□□□ -1.18
CLK1-203ENST00000409769 IGF2BP3O00425 579 aaKnown RBP eCLIP7.69□□□□□ -1.18
CLK1-203ENST00000409769 AOC3Q16853 763 aa7.69□□□□□ -1.18
CLK1-203ENST00000409769 ANGEL2Q5VTE6 544 aaKnown RBP7.69□□□□□ -1.18
CLK1-203ENST00000409769 TOP6BLQ8N6T0 577 aa7.69□□□□□ -1.18
CLK1-203ENST00000409769 C3orf58Q8NDZ4 430 aa7.69□□□□□ -1.18
CLK1-203ENST00000409769 PI4K2BQ8TCG2 481 aa7.69□□□□□ -1.18
CLK1-203ENST00000409769 STK35Q8TDR2 534 aa7.69□□□□□ -1.18
CLK1-203ENST00000409769 TNKS2Q9H2K2 1166 aa7.69□□□□□ -1.18
CLK1-203ENST00000409769 RC3H2Q9HBD1 1191 aaKnown RBP7.69□□□□□ -1.18
CLK1-203ENST00000409769 KRTAP4-8A0A0G2JLE6 195 aa7.68□□□□□ -1.18
CLK1-203ENST00000409769 ZBTB7CA1YPR0 619 aa7.68□□□□□ -1.18
CLK1-203ENST00000409769 FANCGO15287 622 aa7.68□□□□□ -1.18
CLK1-203ENST00000409769 LEFTY1O75610 366 aa7.68□□□□□ -1.18
CLK1-203ENST00000409769 C8AP07357 584 aa7.68□□□□□ -1.18
CLK1-203ENST00000409769 ALG1LQ6GMV1 187 aa7.68□□□□□ -1.18
CLK1-203ENST00000409769 ASB11Q8WXH4 323 aa7.68□□□□□ -1.18
CLK1-203ENST00000409769 GZF1Q9H116 711 aaPredicted RBP7.68□□□□□ -1.18
CLK1-203ENST00000409769 ZCCHC6Q5VYS8 1495 aaKnown RBP7.68□□□□□ -1.18
CLK1-203ENST00000409769 FMR1Q06787 632 aaKnown RBP eCLIP7.67□□□□□ -1.18
CLK1-203ENST00000409769 SLC23A3Q6PIS1 610 aa7.67□□□□□ -1.18
CLK1-203ENST00000409769 PICK1Q9NRD5 415 aa7.67□□□□□ -1.18
CLK1-203ENST00000409769 CYP8B1Q9UNU6 501 aa7.67□□□□□ -1.18
CLK1-203ENST00000409769 RNASE1P07998 156 aaKnown RBP7.66□□□□□ -1.18
CLK1-203ENST00000409769 ATP2B2Q01814 1243 aa7.66□□□□□ -1.18
CLK1-203ENST00000409769 LLGL2Q6P1M3 1020 aa7.66□□□□□ -1.18
CLK1-203ENST00000409769 CDC37L1Q7L3B6 337 aa7.66□□□□□ -1.18
CLK1-203ENST00000409769 TMEM40Q8WWA1 233 aa7.66□□□□□ -1.18
CLK1-203ENST00000409769 PRDM10Q9NQV6 1147 aa7.66□□□□□ -1.18
CLK1-203ENST00000409769 MBNL3Q9NUK0 354 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms