RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 ZSWIM5Q9P217 1185 aa12.13□□□□□ -0.47
SNORD88C-201ENST00000408061 CCDC196A0A1B0GTZ2 297 aa12.12□□□□□ -0.47
SNORD88C-201ENST00000408061 MINDY4BA8MYZ0 360 aa12.12□□□□□ -0.47
SNORD88C-201ENST00000408061 C21orf2O43822 256 aa12.12□□□□□ -0.47
SNORD88C-201ENST00000408061 ECE2O60344 883 aa12.12□□□□□ -0.47
SNORD88C-201ENST00000408061 MCM4P33991 863 aa12.12□□□□□ -0.47
SNORD88C-201ENST00000408061 BTDP43251 543 aa12.12□□□□□ -0.47
SNORD88C-201ENST00000408061 ANTXR2P58335 489 aa12.12□□□□□ -0.47
SNORD88C-201ENST00000408061 SKOR2Q2VWA4 1001 aaPredicted RBP12.12□□□□□ -0.47
SNORD88C-201ENST00000408061 DALRD3Q5D0E6 543 aaKnown RBP12.12□□□□□ -0.47
SNORD88C-201ENST00000408061 C12orf60Q5U649 245 aa12.12□□□□□ -0.47
SNORD88C-201ENST00000408061 IQCA1Q86XH1 822 aa12.12□□□□□ -0.47
SNORD88C-201ENST00000408061 SMARCC2Q8TAQ2 1214 aa12.12□□□□□ -0.47
SNORD88C-201ENST00000408061 IGDCC4Q8TDY8 1250 aa12.12□□□□□ -0.47
SNORD88C-201ENST00000408061 TEKT1Q969V4 418 aa12.12□□□□□ -0.47
SNORD88C-201ENST00000408061 PSME4Q14997 1843 aa12.11□□□□□ -0.47
SNORD88C-201ENST00000408061 LAMB1P07942 1786 aa12.11□□□□□ -0.47
SNORD88C-201ENST00000408061 ROBO3Q96MS0 1386 aa12.11□□□□□ -0.47
SNORD88C-201ENST00000408061 A0A0G2JLW4 131 aa12.11□□□□□ -0.47
SNORD88C-201ENST00000408061 B4E1Z4 1266 aa12.11□□□□□ -0.47
SNORD88C-201ENST00000408061 SH2B2O14492 632 aaPredicted RBP12.11□□□□□ -0.47
SNORD88C-201ENST00000408061 IFIT3O14879 490 aaKnown RBP12.11□□□□□ -0.47
SNORD88C-201ENST00000408061 PPIP5K2O43314 1243 aa12.11□□□□□ -0.47
SNORD88C-201ENST00000408061 STX6O43752 255 aa12.11□□□□□ -0.47
SNORD88C-201ENST00000408061 CDKL5O76039 1030 aa12.11□□□□□ -0.47
SNORD88C-201ENST00000408061 ZBTB7AO95365 584 aa12.11□□□□□ -0.47
SNORD88C-201ENST00000408061 GJB2P29033 226 aa12.11□□□□□ -0.47
SNORD88C-201ENST00000408061 CTDSPL2Q05D32 466 aa12.11□□□□□ -0.47
SNORD88C-201ENST00000408061 APOBRQ0VD83 1088 aa12.11□□□□□ -0.47
SNORD88C-201ENST00000408061 DOK7Q18PE1 504 aa12.11□□□□□ -0.47
SNORD88C-201ENST00000408061 DACT2Q5SW24 774 aa12.11□□□□□ -0.47
SNORD88C-201ENST00000408061 TTC6Q86TZ1 520 aa12.11□□□□□ -0.47
SNORD88C-201ENST00000408061 TEX11Q8IYF3 940 aa12.11□□□□□ -0.47
SNORD88C-201ENST00000408061 TCEANC2Q96MN5 208 aa12.11□□□□□ -0.47
SNORD88C-201ENST00000408061 ZDHHC15Q96MV8 337 aa12.11□□□□□ -0.47
SNORD88C-201ENST00000408061 SGIP1Q9BQI5 828 aa12.11□□□□□ -0.47
SNORD88C-201ENST00000408061 UBAC1Q9BSL1 405 aa12.11□□□□□ -0.47
SNORD88C-201ENST00000408061 MCM9Q9NXL9 1143 aa12.11□□□□□ -0.47
SNORD88C-201ENST00000408061 SERPINA10Q9UK55 444 aa12.11□□□□□ -0.47
SNORD88C-201ENST00000408061 TTF2Q9UNY4 1162 aaKnown RBP12.11□□□□□ -0.47
SNORD88C-201ENST00000408061 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.11□□□□□ -0.47
SNORD88C-201ENST00000408061 BAZ2AQ9UIF9 1905 aaKnown RBP12.11□□□□□ -0.47
SNORD88C-201ENST00000408061 NID2Q14112 1375 aa12.1□□□□□ -0.47
SNORD88C-201ENST00000408061 FOCADQ5VW36 1801 aa12.1□□□□□ -0.47
SNORD88C-201ENST00000408061 KDM4AO75164 1064 aa12.1□□□□□ -0.47
SNORD88C-201ENST00000408061 LARGE1O95461 756 aa12.1□□□□□ -0.47
SNORD88C-201ENST00000408061 CALM1P0DP23 149 aa12.1□□□□□ -0.47
SNORD88C-201ENST00000408061 CALM2P0DP24 149 aa12.1□□□□□ -0.47
SNORD88C-201ENST00000408061 CALM3P0DP25 149 aa12.1□□□□□ -0.47
SNORD88C-201ENST00000408061 SYT1P21579 422 aa12.1□□□□□ -0.47
SNORD88C-201ENST00000408061 RHBDL3P58872 404 aa12.1□□□□□ -0.47
SNORD88C-201ENST00000408061 R3HDM1Q15032 1099 aaKnown RBP12.1□□□□□ -0.47
SNORD88C-201ENST00000408061 DIXDC1Q155Q3 683 aa12.1□□□□□ -0.47
SNORD88C-201ENST00000408061 TMEM67Q5HYA8 995 aa12.1□□□□□ -0.47
SNORD88C-201ENST00000408061 LARP1BQ659C4 914 aaKnown RBP12.1□□□□□ -0.47
SNORD88C-201ENST00000408061 OLFM4Q6UX06 510 aa12.1□□□□□ -0.47
SNORD88C-201ENST00000408061 SH3RF3Q8TEJ3 882 aaPredicted RBP12.1□□□□□ -0.47
SNORD88C-201ENST00000408061 ATF5Q9Y2D1 282 aaPredicted RBP12.1□□□□□ -0.47
SNORD88C-201ENST00000408061 DAGLAQ9Y4D2 1042 aa12.1□□□□□ -0.47
SNORD88C-201ENST00000408061 LTBP3Q9NS15 1303 aa12.1□□□□□ -0.47
SNORD88C-201ENST00000408061 BRCA1P38398 1863 aaKnown RBP12.09□□□□□ -0.47
SNORD88C-201ENST00000408061 KLF18A0A0U1RQI7 1052 aa12.09□□□□□ -0.47
SNORD88C-201ENST00000408061 CCDC69A6NI79 296 aa12.09□□□□□ -0.47
SNORD88C-201ENST00000408061 POLR3DP05423 398 aaPredicted RBP12.09□□□□□ -0.47
SNORD88C-201ENST00000408061 ZSCAN22P10073 491 aaPredicted RBP12.09□□□□□ -0.47
SNORD88C-201ENST00000408061 SCRN1Q12765 414 aa12.09□□□□□ -0.47
SNORD88C-201ENST00000408061 WTAPQ15007 396 aa12.09□□□□□ -0.47
SNORD88C-201ENST00000408061 GRIK5Q16478 980 aa12.09□□□□□ -0.47
SNORD88C-201ENST00000408061 PPP4R3BQ5MIZ7 849 aa12.09□□□□□ -0.47
SNORD88C-201ENST00000408061 CYB5R4Q7L1T6 521 aa12.09□□□□□ -0.47
SNORD88C-201ENST00000408061 SLC51AQ86UW1 340 aa12.09□□□□□ -0.47
SNORD88C-201ENST00000408061 CERS5Q8N5B7 392 aa12.09□□□□□ -0.47
SNORD88C-201ENST00000408061 NECAB1Q8N987 351 aa12.09□□□□□ -0.47
SNORD88C-201ENST00000408061 FAM184AQ8NB25 1140 aa12.09□□□□□ -0.47
SNORD88C-201ENST00000408061 TGFBRAP1Q8WUH2 860 aa12.09□□□□□ -0.47
SNORD88C-201ENST00000408061 MAP3K14Q99558 947 aa12.09□□□□□ -0.47
SNORD88C-201ENST00000408061 DBNDD1Q9H9R9 158 aa12.09□□□□□ -0.47
SNORD88C-201ENST00000408061 TOMM22Q9NS69 142 aa12.09□□□□□ -0.47
SNORD88C-201ENST00000408061 TCP11L1Q9NUJ3 509 aa12.09□□□□□ -0.47
SNORD88C-201ENST00000408061 JAG2Q9Y219 1238 aa12.09□□□□□ -0.47
SNORD88C-201ENST00000408061 SLC12A7Q9Y666 1083 aa12.09□□□□□ -0.47
SNORD88C-201ENST00000408061 NEDD4P46934 1319 aa12.09□□□□□ -0.47
SNORD88C-201ENST00000408061 CDK5RAP2Q96SN8 1893 aa12.08□□□□□ -0.48
SNORD88C-201ENST00000408061 CPLX1O14810 134 aa12.08□□□□□ -0.48
SNORD88C-201ENST00000408061 ZBTB43O43298 467 aa12.08□□□□□ -0.48
SNORD88C-201ENST00000408061 BAG4O95429 457 aaKnown RBP12.08□□□□□ -0.48
SNORD88C-201ENST00000408061 VIL1P09327 827 aaKnown RBP12.08□□□□□ -0.48
SNORD88C-201ENST00000408061 ST3GAL1Q11201 340 aa12.08□□□□□ -0.48
SNORD88C-201ENST00000408061 COL9A3Q14050 684 aaPredicted RBP12.08□□□□□ -0.48
SNORD88C-201ENST00000408061 AOC3Q16853 763 aa12.08□□□□□ -0.48
SNORD88C-201ENST00000408061 CSPP1Q1MSJ5 1256 aa12.08□□□□□ -0.48
SNORD88C-201ENST00000408061 APOA5Q6Q788 366 aa12.08□□□□□ -0.48
SNORD88C-201ENST00000408061 NFXL1Q6ZNB6 911 aa12.08□□□□□ -0.48
SNORD88C-201ENST00000408061 DGKHQ86XP1 1220 aa12.08□□□□□ -0.48
SNORD88C-201ENST00000408061 ZNF444Q8N0Y2 327 aaPredicted RBP12.08□□□□□ -0.48
SNORD88C-201ENST00000408061 LARGE2Q8N3Y3 721 aa12.08□□□□□ -0.48
SNORD88C-201ENST00000408061 AGBL3Q8NEM8 1001 aa12.08□□□□□ -0.48
SNORD88C-201ENST00000408061 ANKS1AQ92625 1134 aa12.08□□□□□ -0.48
SNORD88C-201ENST00000408061 FBXW7Q969H0 707 aa12.08□□□□□ -0.48
SNORD88C-201ENST00000408061 ZSCAN10Q96SZ4 725 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms