RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 E2F5Q15329 346 aa6.66□□□□□ -1.34
HDAC9-203ENST00000406072 LONRF2Q1L5Z9 754 aa6.66□□□□□ -1.34
HDAC9-203ENST00000406072 RPUSD2Q8IZ73 545 aaKnown RBP6.66□□□□□ -1.34
HDAC9-203ENST00000406072 CAPZA3Q96KX2 299 aa6.66□□□□□ -1.34
HDAC9-203ENST00000406072 SUDS3Q9H7L9 328 aaPredicted RBP6.66□□□□□ -1.34
HDAC9-203ENST00000406072 DDX21Q9NR30 783 aaKnown RBP eCLIP6.66□□□□□ -1.34
HDAC9-203ENST00000406072 DBF4Q9UBU7 674 aaPredicted RBP6.66□□□□□ -1.34
HDAC9-203ENST00000406072 PDE1AP54750 535 aa6.66□□□□□ -1.34
HDAC9-203ENST00000406072 AK2P54819 239 aa6.66□□□□□ -1.34
HDAC9-203ENST00000406072 MTX1Q13505 466 aa6.66□□□□□ -1.34
HDAC9-203ENST00000406072 STIM1Q13586 685 aa6.66□□□□□ -1.34
HDAC9-203ENST00000406072 SPA17Q15506 151 aa6.66□□□□□ -1.34
HDAC9-203ENST00000406072 EP400NLQ6ZTU2 488 aa6.66□□□□□ -1.34
HDAC9-203ENST00000406072 PSMD1Q99460 953 aa6.66□□□□□ -1.34
HDAC9-203ENST00000406072 BAG1Q99933 345 aaPredicted RBP6.66□□□□□ -1.34
HDAC9-203ENST00000406072 KIAA1551Q9HCM1 1747 aa6.66□□□□□ -1.34
HDAC9-203ENST00000406072 PIK3R5Q8WYR1 880 aa6.65□□□□□ -1.34
HDAC9-203ENST00000406072 FAM204AQ9H8W3 233 aa6.65□□□□□ -1.34
HDAC9-203ENST00000406072 PCK1P35558 622 aa6.65□□□□□ -1.34
HDAC9-203ENST00000406072 CKAP4Q07065 602 aaKnown RBP6.65□□□□□ -1.34
HDAC9-203ENST00000406072 KRT32Q14532 448 aa6.65□□□□□ -1.34
HDAC9-203ENST00000406072 PPP1R12CQ9BZL4 782 aa6.65□□□□□ -1.34
HDAC9-203ENST00000406072 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.65□□□□□ -1.34
HDAC9-203ENST00000406072 TRPC5Q9UL62 973 aaPredicted RBP6.65□□□□□ -1.34
HDAC9-203ENST00000406072 CNTNAP4Q9C0A0 1308 aa6.65□□□□□ -1.34
HDAC9-203ENST00000406072 YEATS4O95619 227 aa6.65□□□□□ -1.35
HDAC9-203ENST00000406072 POLR3DP05423 398 aaPredicted RBP6.65□□□□□ -1.35
HDAC9-203ENST00000406072 CSB-PGBD3P0DP91 1061 aa6.65□□□□□ -1.35
HDAC9-203ENST00000406072 HSPA1LP34931 641 aa6.65□□□□□ -1.35
HDAC9-203ENST00000406072 EVA1CP58658 441 aa6.65□□□□□ -1.35
HDAC9-203ENST00000406072 GNGT1P63211 74 aa6.65□□□□□ -1.35
HDAC9-203ENST00000406072 ZKSCAN8Q15776 578 aaPredicted RBP6.65□□□□□ -1.35
HDAC9-203ENST00000406072 CCDC6Q16204 474 aa6.65□□□□□ -1.35
HDAC9-203ENST00000406072 MRFAP1L1Q96HT8 127 aa6.65□□□□□ -1.35
HDAC9-203ENST00000406072 LUC7LQ9NQ29 371 aaKnown RBP6.65□□□□□ -1.35
HDAC9-203ENST00000406072 GOLGA6BA6NDN3 693 aa6.65□□□□□ -1.35
HDAC9-203ENST00000406072 NEXNQ0ZGT2 675 aa6.65□□□□□ -1.35
HDAC9-203ENST00000406072 WASHC4Q2M389 1173 aa6.65□□□□□ -1.35
HDAC9-203ENST00000406072 FKBP15Q5T1M5 1219 aa6.65□□□□□ -1.35
HDAC9-203ENST00000406072 ARFGAP2Q8N6H7 521 aa6.65□□□□□ -1.35
HDAC9-203ENST00000406072 ANKS4BQ8N8V4 417 aa6.65□□□□□ -1.35
HDAC9-203ENST00000406072 FBXO41Q8TF61 875 aa6.65□□□□□ -1.35
HDAC9-203ENST00000406072 TAF4BQ92750 862 aa6.65□□□□□ -1.35
HDAC9-203ENST00000406072 NUCKS1Q9H1E3 243 aaKnown RBP6.65□□□□□ -1.35
HDAC9-203ENST00000406072 ZSCAN16Q9H4T2 348 aaPredicted RBP6.65□□□□□ -1.35
HDAC9-203ENST00000406072 BICC1Q9H694 974 aaKnown RBP6.65□□□□□ -1.35
HDAC9-203ENST00000406072 DLEC1Q9Y238 1755 aa6.64□□□□□ -1.35
HDAC9-203ENST00000406072 MARCH6O60337 910 aa6.64□□□□□ -1.35
HDAC9-203ENST00000406072 CCT2P78371 535 aaKnown RBP6.64□□□□□ -1.35
HDAC9-203ENST00000406072 ST5P78524 1137 aa6.64□□□□□ -1.35
HDAC9-203ENST00000406072 SLC20A2Q08357 652 aa6.64□□□□□ -1.35
HDAC9-203ENST00000406072 RC3H1Q5TC82 1133 aaKnown RBP6.64□□□□□ -1.35
HDAC9-203ENST00000406072 GIGYF2Q6Y7W6 1299 aaKnown RBP6.64□□□□□ -1.35
HDAC9-203ENST00000406072 FAM71BQ8TC56 605 aa6.64□□□□□ -1.35
HDAC9-203ENST00000406072 MRPS27Q92552 414 aaKnown RBP6.64□□□□□ -1.35
HDAC9-203ENST00000406072 NEUROD6Q96NK8 337 aa6.64□□□□□ -1.35
HDAC9-203ENST00000406072 TACO1Q9BSH4 297 aaKnown RBP6.64□□□□□ -1.35
HDAC9-203ENST00000406072 CLSTN2Q9H4D0 955 aa6.64□□□□□ -1.35
HDAC9-203ENST00000406072 IMPACTQ9P2X3 320 aa6.64□□□□□ -1.35
HDAC9-203ENST00000406072 GUCA1BQ9UMX6 200 aa6.64□□□□□ -1.35
HDAC9-203ENST00000406072 RIPOR2Q9Y4F9 1068 aa6.64□□□□□ -1.35
HDAC9-203ENST00000406072 EXOC5O00471 708 aa6.64□□□□□ -1.35
HDAC9-203ENST00000406072 PPFIA4O75335 1185 aa6.64□□□□□ -1.35
HDAC9-203ENST00000406072 ECM2O94769 699 aaPredicted RBP6.64□□□□□ -1.35
HDAC9-203ENST00000406072 CPA1P15085 419 aa6.64□□□□□ -1.35
HDAC9-203ENST00000406072 HPDP32754 393 aaPredicted RBP6.64□□□□□ -1.35
HDAC9-203ENST00000406072 TRIM28Q13263 835 aaKnown RBP6.64□□□□□ -1.35
HDAC9-203ENST00000406072 SLFNL1Q499Z3 407 aa6.64□□□□□ -1.35
HDAC9-203ENST00000406072 USO1O60763 962 aaKnown RBP6.64□□□□□ -1.35
HDAC9-203ENST00000406072 GLRX3O76003 335 aaKnown RBP6.64□□□□□ -1.35
HDAC9-203ENST00000406072 CFAP58Q5T655 872 aa6.64□□□□□ -1.35
HDAC9-203ENST00000406072 OTUD7AQ8TE49 926 aaPredicted RBP6.64□□□□□ -1.35
HDAC9-203ENST00000406072 RABGGTAQ92696 567 aa6.64□□□□□ -1.35
HDAC9-203ENST00000406072 C8orf76Q96K31 380 aa6.64□□□□□ -1.35
HDAC9-203ENST00000406072 GJD4Q96KN9 370 aaPredicted RBP6.64□□□□□ -1.35
HDAC9-203ENST00000406072 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.64□□□□□ -1.35
HDAC9-203ENST00000406072 SAMM50Q9Y512 469 aa6.64□□□□□ -1.35
HDAC9-203ENST00000406072 KIF13BQ9NQT8 1826 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 DUOX1Q9NRD9 1551 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 A6NNZ2 444 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 CTIFO43310 598 aaKnown RBP6.63□□□□□ -1.35
HDAC9-203ENST00000406072 CABP4P57796 275 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 TUBB8Q3ZCM7 444 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 ZNF772Q68DY9 489 aaPredicted RBP6.63□□□□□ -1.35
HDAC9-203ENST00000406072 MPRIPQ6WCQ1 1025 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 FBF1Q8TES7 1133 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 BRF1Q92994 677 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 TBC1D31Q96DN5 1066 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 CALR3Q96L12 384 aaKnown RBP6.63□□□□□ -1.35
HDAC9-203ENST00000406072 NAA15Q9BXJ9 866 aaKnown RBP6.63□□□□□ -1.35
HDAC9-203ENST00000406072 PARD6BQ9BYG5 372 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 DCTPP1Q9H773 170 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 MED4Q9NPJ6 270 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 MRFAP1Q9Y605 127 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 ARHGAP6O43182 974 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 FLIIQ13045 1269 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 WHAMMP3Q1A5X7 153 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 SEC62Q99442 399 aaKnown RBP6.63□□□□□ -1.35
HDAC9-203ENST00000406072 CAPS2Q9BXY5 557 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 XPO4Q9C0E2 1151 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms