RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ASPAP45381 313 aa7.98□□□□□ -1.13
HMGB1P13-201ENST00000406019 MRPL58Q14197 206 aaKnown RBP7.98□□□□□ -1.13
HMGB1P13-201ENST00000406019 SHKBP1Q8TBC3 707 aa7.98□□□□□ -1.13
HMGB1P13-201ENST00000406019 GIPC2Q8TF65 315 aa7.98□□□□□ -1.13
HMGB1P13-201ENST00000406019 CRELD1Q96HD1 420 aa7.98□□□□□ -1.13
HMGB1P13-201ENST00000406019 ATXN3LQ9H3M9 355 aa7.98□□□□□ -1.13
HMGB1P13-201ENST00000406019 CYP8B1Q9UNU6 501 aa7.98□□□□□ -1.13
HMGB1P13-201ENST00000406019 LOC105371045A0A1W2PR82 267 aa7.97□□□□□ -1.13
HMGB1P13-201ENST00000406019 SLFN14P0C7P3 912 aa7.97□□□□□ -1.13
HMGB1P13-201ENST00000406019 RAB6AP20340 208 aa7.97□□□□□ -1.13
HMGB1P13-201ENST00000406019 CD97P48960 835 aa7.97□□□□□ -1.13
HMGB1P13-201ENST00000406019 RPS26P62854 115 aaKnown RBP7.97□□□□□ -1.13
HMGB1P13-201ENST00000406019 ERVK-24P63145 666 aa7.97□□□□□ -1.13
HMGB1P13-201ENST00000406019 ARTNQ5T4W7 220 aa7.97□□□□□ -1.13
HMGB1P13-201ENST00000406019 ZAR1Q86SH2 424 aa7.97□□□□□ -1.13
HMGB1P13-201ENST00000406019 MFSD14AQ96MC6 490 aa7.97□□□□□ -1.13
HMGB1P13-201ENST00000406019 SAMM50Q9Y512 469 aa7.97□□□□□ -1.13
HMGB1P13-201ENST00000406019 VAMP1P23763 118 aa7.96□□□□□ -1.14
HMGB1P13-201ENST00000406019 RXRBP28702 533 aa7.96□□□□□ -1.14
HMGB1P13-201ENST00000406019 XPCQ01831 940 aaPredicted RBP7.96□□□□□ -1.14
HMGB1P13-201ENST00000406019 LRP8Q14114 963 aa7.96□□□□□ -1.14
HMGB1P13-201ENST00000406019 TTLL4Q14679 1199 aa7.96□□□□□ -1.14
HMGB1P13-201ENST00000406019 LRRC14Q15048 493 aa7.96□□□□□ -1.14
HMGB1P13-201ENST00000406019 CCDC85BQ15834 202 aaPredicted RBP7.96□□□□□ -1.14
HMGB1P13-201ENST00000406019 TTBK2Q6IQ55 1244 aa7.96□□□□□ -1.14
HMGB1P13-201ENST00000406019 PAOXQ6QHF9 649 aa7.96□□□□□ -1.14
HMGB1P13-201ENST00000406019 AGMOQ6ZNB7 445 aa7.96□□□□□ -1.14
HMGB1P13-201ENST00000406019 NOC4LQ9BVI4 516 aaKnown RBP7.96□□□□□ -1.14
HMGB1P13-201ENST00000406019 CBX8Q9HC52 389 aa7.96□□□□□ -1.14
HMGB1P13-201ENST00000406019 KIAA1324LA8MWY0 1029 aaPredicted RBP7.95□□□□□ -1.14
HMGB1P13-201ENST00000406019 SORBS3O60504 671 aa7.95□□□□□ -1.14
HMGB1P13-201ENST00000406019 LIG3P49916 1009 aa7.95□□□□□ -1.14
HMGB1P13-201ENST00000406019 MAP7Q14244 749 aa7.95□□□□□ -1.14
HMGB1P13-201ENST00000406019 TAF1CQ15572 869 aaPredicted RBP7.95□□□□□ -1.14
HMGB1P13-201ENST00000406019 LDLRAD1Q5T700 205 aa7.95□□□□□ -1.14
HMGB1P13-201ENST00000406019 YIPF2Q9BWQ6 316 aa7.95□□□□□ -1.14
HMGB1P13-201ENST00000406019 HYAL3O43820 417 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P13-201ENST00000406019 TFE3P19532 575 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P13-201ENST00000406019 NFKBIBQ15653 356 aa7.94□□□□□ -1.14
HMGB1P13-201ENST00000406019 XP32Q5T750 250 aa7.94□□□□□ -1.14
HMGB1P13-201ENST00000406019 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P13-201ENST00000406019 UBE3DQ7Z6J8 389 aa7.94□□□□□ -1.14
HMGB1P13-201ENST00000406019 RNF214Q8ND24 703 aa7.94□□□□□ -1.14
HMGB1P13-201ENST00000406019 ISL2Q96A47 359 aa7.94□□□□□ -1.14
HMGB1P13-201ENST00000406019 PSMG3-AS1Q96PY0 264 aa7.94□□□□□ -1.14
HMGB1P13-201ENST00000406019 PCDHB5Q9Y5E4 795 aa7.94□□□□□ -1.14
HMGB1P13-201ENST00000406019 WDR64B1ANS9 1081 aa7.93□□□□□ -1.14
HMGB1P13-201ENST00000406019 SPINK2P20155 84 aa7.93□□□□□ -1.14
HMGB1P13-201ENST00000406019 CDK8P49336 464 aa7.93□□□□□ -1.14
HMGB1P13-201ENST00000406019 INPP5AQ14642 412 aa7.93□□□□□ -1.14
HMGB1P13-201ENST00000406019 ZNF326Q5BKZ1 582 aaKnown RBP7.93□□□□□ -1.14
HMGB1P13-201ENST00000406019 LRFN4Q6PJG9 635 aa7.93□□□□□ -1.14
HMGB1P13-201ENST00000406019 CYFIP1Q7L576 1253 aa7.93□□□□□ -1.14
HMGB1P13-201ENST00000406019 SMYD4Q8IYR2 804 aaPredicted RBP7.93□□□□□ -1.14
HMGB1P13-201ENST00000406019 PHC3Q8NDX5 983 aa7.93□□□□□ -1.14
HMGB1P13-201ENST00000406019 DAGLAQ9Y4D2 1042 aa7.93□□□□□ -1.14
HMGB1P13-201ENST00000406019 FAM170BA6NMN3 283 aa7.92□□□□□ -1.14
HMGB1P13-201ENST00000406019 HCLS1P14317 486 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P13-201ENST00000406019 HOXA10P31260 410 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P13-201ENST00000406019 CPSF6Q16630 551 aaKnown RBP eCLIP7.92□□□□□ -1.14
HMGB1P13-201ENST00000406019 PPM1JQ5JR12 505 aa7.92□□□□□ -1.14
HMGB1P13-201ENST00000406019 ZBTB37Q5TC79 503 aa7.92□□□□□ -1.14
HMGB1P13-201ENST00000406019 DCDC2CA8MYV0 355 aa7.91□□□□□ -1.14
HMGB1P13-201ENST00000406019 HNRNPUQ00839 825 aaKnown RBP eCLIP7.91□□□□□ -1.14
HMGB1P13-201ENST00000406019 SEPT6Q14141 434 aa7.91□□□□□ -1.14
HMGB1P13-201ENST00000406019 MSMPQ1L6U9 139 aa7.91□□□□□ -1.14
HMGB1P13-201ENST00000406019 FBXL6Q8N531 539 aa7.91□□□□□ -1.14
HMGB1P13-201ENST00000406019 ACSBG1Q96GR2 724 aa7.91□□□□□ -1.14
HMGB1P13-201ENST00000406019 RHOVQ96L33 236 aa7.91□□□□□ -1.14
HMGB1P13-201ENST00000406019 VTI1BQ9UEU0 232 aa7.91□□□□□ -1.14
HMGB1P13-201ENST00000406019 PCDHA4Q9UN74 947 aa7.91□□□□□ -1.14
HMGB1P13-201ENST00000406019 GFRA2O00451 464 aa7.9□□□□□ -1.14
HMGB1P13-201ENST00000406019 MAP3K11Q16584 847 aa7.9□□□□□ -1.14
HMGB1P13-201ENST00000406019 C12orf40Q86WS4 652 aa7.9□□□□□ -1.14
HMGB1P13-201ENST00000406019 PLPPR2Q96GM1 343 aa7.9□□□□□ -1.14
HMGB1P13-201ENST00000406019 TBC1D32Q96NH3 1257 aa7.9□□□□□ -1.14
HMGB1P13-201ENST00000406019 PIDD1Q9HB75 910 aa7.9□□□□□ -1.14
HMGB1P13-201ENST00000406019 ZFP64Q9NPA5 681 aa7.9□□□□□ -1.14
HMGB1P13-201ENST00000406019 TLR6Q9Y2C9 796 aa7.9□□□□□ -1.14
HMGB1P13-201ENST00000406019 CSADQ9Y600 493 aa7.9□□□□□ -1.14
HMGB1P13-201ENST00000406019 COBLO75128 1261 aa7.89□□□□□ -1.15
HMGB1P13-201ENST00000406019 ADAMTS4O75173 837 aa7.89□□□□□ -1.15
HMGB1P13-201ENST00000406019 TCF3P15923 654 aa7.89□□□□□ -1.15
HMGB1P13-201ENST00000406019 SSTR4P31391 388 aa7.89□□□□□ -1.15
HMGB1P13-201ENST00000406019 CDK5R2Q13319 367 aa7.89□□□□□ -1.15
HMGB1P13-201ENST00000406019 ZNF765Q7L2R6 523 aa7.89□□□□□ -1.15
HMGB1P13-201ENST00000406019 ERMP1Q7Z2K6 904 aa7.89□□□□□ -1.15
HMGB1P13-201ENST00000406019 DTX1Q86Y01 620 aa7.89□□□□□ -1.15
HMGB1P13-201ENST00000406019 LGR6Q9HBX8 967 aa7.89□□□□□ -1.15
HMGB1P13-201ENST00000406019 PIM2Q9P1W9 311 aa7.89□□□□□ -1.15
HMGB1P13-201ENST00000406019 PCOLCE2Q9UKZ9 415 aa7.89□□□□□ -1.15
HMGB1P13-201ENST00000406019 U3KQE9 123 aa7.89□□□□□ -1.15
HMGB1P13-201ENST00000406019 SCO2A0A1W2PP80 73 aa7.88□□□□□ -1.15
HMGB1P13-201ENST00000406019 FANCGO15287 622 aa7.88□□□□□ -1.15
HMGB1P13-201ENST00000406019 FOSL1P15407 271 aa7.88□□□□□ -1.15
HMGB1P13-201ENST00000406019 OGFOD3Q6PK18 319 aa7.88□□□□□ -1.15
HMGB1P13-201ENST00000406019 NFXL1Q6ZNB6 911 aa7.88□□□□□ -1.15
HMGB1P13-201ENST00000406019 MRS2Q9HD23 443 aa7.88□□□□□ -1.15
HMGB1P13-201ENST00000406019 RLBP1P12271 317 aa7.87□□□□□ -1.15
HMGB1P13-201ENST00000406019 GARTP22102 1010 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms