RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 KIF23Q02241 960 aaPredicted RBP25.22■■□□□ 1.63
PDGFA-204ENST00000405692 ZSCAN25Q6NSZ9 544 aa25.22■■□□□ 1.63
PDGFA-204ENST00000405692 ADGRA1Q86SQ6 560 aa25.22■■□□□ 1.63
PDGFA-204ENST00000405692 SMC5Q8IY18 1101 aa25.22■■□□□ 1.63
PDGFA-204ENST00000405692 SH3RF3Q8TEJ3 882 aaPredicted RBP25.22■■□□□ 1.63
PDGFA-204ENST00000405692 DDX4Q9NQI0 724 aaKnown RBP25.22■■□□□ 1.63
PDGFA-204ENST00000405692 DOCK2Q92608 1830 aa25.21■■□□□ 1.63
PDGFA-204ENST00000405692 PDE6AP16499 860 aa25.21■■□□□ 1.63
PDGFA-204ENST00000405692 ZFPM1Q8IX07 1006 aa25.21■■□□□ 1.63
PDGFA-204ENST00000405692 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.21■■□□□ 1.63
PDGFA-204ENST00000405692 CA12O43570 354 aa25.2■■□□□ 1.62
PDGFA-204ENST00000405692 GLRX3O76003 335 aaKnown RBP25.2■■□□□ 1.62
PDGFA-204ENST00000405692 ZBTB48P10074 688 aaPredicted RBP25.2■■□□□ 1.62
PDGFA-204ENST00000405692 MX1P20591 662 aa25.2■■□□□ 1.62
PDGFA-204ENST00000405692 MIGA2Q7L4E1 593 aa25.2■■□□□ 1.62
PDGFA-204ENST00000405692 EDC3Q96F86 508 aaKnown RBP25.2■■□□□ 1.62
PDGFA-204ENST00000405692 WRNIP1Q96S55 665 aa25.2■■□□□ 1.62
PDGFA-204ENST00000405692 OSBPL5Q9H0X9 879 aaPredicted RBP25.2■■□□□ 1.62
PDGFA-204ENST00000405692 DHX36Q9H2U1 1008 aaKnown RBP25.2■■□□□ 1.62
PDGFA-204ENST00000405692 COL2A1P02458 1487 aaPredicted RBP25.2■■□□□ 1.62
PDGFA-204ENST00000405692 ATRNL1Q5VV63 1379 aa25.19■■□□□ 1.62
PDGFA-204ENST00000405692 SPRYD7Q5W111 196 aa25.19■■□□□ 1.62
PDGFA-204ENST00000405692 MIGA1Q8NAN2 632 aa25.19■■□□□ 1.62
PDGFA-204ENST00000405692 TGFBRAP1Q8WUH2 860 aa25.19■■□□□ 1.62
PDGFA-204ENST00000405692 CLMNQ96JQ2 1002 aa25.19■■□□□ 1.62
PDGFA-204ENST00000405692 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.19■■□□□ 1.62
PDGFA-204ENST00000405692 ZNF532Q9HCE3 1301 aa25.18■■□□□ 1.62
PDGFA-204ENST00000405692 MYO5AQ9Y4I1 1855 aaKnown RBP25.18■■□□□ 1.62
PDGFA-204ENST00000405692 MAGEB6P1A0A0J9YX57 407 aa25.18■■□□□ 1.62
PDGFA-204ENST00000405692 IGHDP01880 384 aa25.18■■□□□ 1.62
PDGFA-204ENST00000405692 SREBF2Q12772 1141 aa25.18■■□□□ 1.62
PDGFA-204ENST00000405692 LRRFIP1Q32MZ4 808 aaKnown RBP25.18■■□□□ 1.62
PDGFA-204ENST00000405692 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.18■■□□□ 1.62
PDGFA-204ENST00000405692 DDTLA6NHG4 134 aaPredicted RBP25.17■■□□□ 1.62
PDGFA-204ENST00000405692 ADD2P35612 726 aa25.17■■□□□ 1.62
PDGFA-204ENST00000405692 USP5P45974 858 aa25.17■■□□□ 1.62
PDGFA-204ENST00000405692 DYNLL1P63167 89 aaKnown RBP25.17■■□□□ 1.62
PDGFA-204ENST00000405692 VGLL4Q14135 290 aa25.17■■□□□ 1.62
PDGFA-204ENST00000405692 SH3BP5LQ7L8J4 393 aa25.17■■□□□ 1.62
PDGFA-204ENST00000405692 WNK4Q96J92 1243 aa25.17■■□□□ 1.62
PDGFA-204ENST00000405692 ZIC5Q96T25 663 aa25.17■■□□□ 1.62
PDGFA-204ENST00000405692 AK9Q5TCS8 1911 aa25.16■■□□□ 1.62
PDGFA-204ENST00000405692 CTCFP49711 727 aaPredicted RBP25.16■■□□□ 1.62
PDGFA-204ENST00000405692 INHBEP58166 350 aa25.16■■□□□ 1.62
PDGFA-204ENST00000405692 UBE3CQ15386 1083 aa25.16■■□□□ 1.62
PDGFA-204ENST00000405692 TSHZ3Q63HK5 1081 aa25.16■■□□□ 1.62
PDGFA-204ENST00000405692 KBTBD3Q8NAB2 608 aa25.16■■□□□ 1.62
PDGFA-204ENST00000405692 ELP3Q9H9T3 547 aa25.16■■□□□ 1.62
PDGFA-204ENST00000405692 ZNF112Q9UJU3 913 aa25.16■■□□□ 1.62
PDGFA-204ENST00000405692 FLT1P17948 1338 aa25.15■■□□□ 1.62
PDGFA-204ENST00000405692 TCRBV5S4A2TA0A5A2 114 aa25.15■■□□□ 1.62
PDGFA-204ENST00000405692 MANSC4A6NHS7 340 aaPredicted RBP25.15■■□□□ 1.62
PDGFA-204ENST00000405692 TBC1D12O60347 775 aa25.15■■□□□ 1.62
PDGFA-204ENST00000405692 MAP3K10Q02779 954 aa25.15■■□□□ 1.62
PDGFA-204ENST00000405692 B4GALNT3Q6L9W6 998 aa25.15■■□□□ 1.62
PDGFA-204ENST00000405692 MAPKAPK5Q8IW41 473 aa25.15■■□□□ 1.62
PDGFA-204ENST00000405692 OTUD7AQ8TE49 926 aaPredicted RBP25.15■■□□□ 1.62
PDGFA-204ENST00000405692 CRNKL1Q9BZJ0 848 aaKnown RBP25.15■■□□□ 1.62
PDGFA-204ENST00000405692 PI4KBQ9UBF8 816 aa25.15■■□□□ 1.62
PDGFA-204ENST00000405692 MKRN3Q13064 507 aaKnown RBP25.14■■□□□ 1.62
PDGFA-204ENST00000405692 CHD1LQ86WJ1 897 aa25.14■■□□□ 1.62
PDGFA-204ENST00000405692 PI4K2BQ8TCG2 481 aa25.14■■□□□ 1.62
PDGFA-204ENST00000405692 OPTNQ96CV9 577 aa25.14■■□□□ 1.62
PDGFA-204ENST00000405692 RIOK1Q9BRS2 568 aaKnown RBP25.14■■□□□ 1.62
PDGFA-204ENST00000405692 LNPKQ9C0E8 428 aa25.14■■□□□ 1.62
PDGFA-204ENST00000405692 STAP2Q9UGK3 403 aa25.14■■□□□ 1.62
PDGFA-204ENST00000405692 SALL3Q9BXA9 1300 aa25.13■■□□□ 1.61
PDGFA-204ENST00000405692 FOXN1O15353 648 aa25.13■■□□□ 1.61
PDGFA-204ENST00000405692 HLA-DOAP06340 250 aa25.13■■□□□ 1.61
PDGFA-204ENST00000405692 ZFYP08048 801 aaPredicted RBP25.13■■□□□ 1.61
PDGFA-204ENST00000405692 NUCB1Q02818 461 aa25.13■■□□□ 1.61
PDGFA-204ENST00000405692 ERO1BQ86YB8 467 aa25.13■■□□□ 1.61
PDGFA-204ENST00000405692 ZKSCAN4Q969J2 545 aaPredicted RBP25.13■■□□□ 1.61
PDGFA-204ENST00000405692 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.13■■□□□ 1.61
PDGFA-204ENST00000405692 SAGE1Q9NXZ1 904 aa25.13■■□□□ 1.61
PDGFA-204ENST00000405692 HERC5Q9UII4 1024 aaKnown RBP25.13■■□□□ 1.61
PDGFA-204ENST00000405692 TM4SF4P48230 202 aa25.12■■□□□ 1.61
PDGFA-204ENST00000405692 PDE1AP54750 535 aa25.12■■□□□ 1.61
PDGFA-204ENST00000405692 NOL9Q5SY16 702 aaKnown RBP25.12■■□□□ 1.61
PDGFA-204ENST00000405692 TRIM34Q9BYJ4 488 aa25.12■■□□□ 1.61
PDGFA-204ENST00000405692 SNCAIPQ9Y6H5 919 aa25.12■■□□□ 1.61
PDGFA-204ENST00000405692 SPDYE5A6NIY4 337 aa25.11■■□□□ 1.61
PDGFA-204ENST00000405692 INPP5BP32019 993 aa25.11■■□□□ 1.61
PDGFA-204ENST00000405692 FOXP4Q8IVH2 680 aaPredicted RBP25.11■■□□□ 1.61
PDGFA-204ENST00000405692 PICK1Q9NRD5 415 aa25.1■■□□□ 1.61
PDGFA-204ENST00000405692 OTOFQ9HC10 1997 aa25.1■■□□□ 1.61
PDGFA-204ENST00000405692 PHF20L1A8MW92 1017 aa25.09■■□□□ 1.61
PDGFA-204ENST00000405692 CTNND1O60716 968 aaKnown RBP25.09■■□□□ 1.61
PDGFA-204ENST00000405692 GTF2A2P52657 109 aa25.09■■□□□ 1.61
PDGFA-204ENST00000405692 PPATQ06203 517 aa25.09■■□□□ 1.61
PDGFA-204ENST00000405692 TTC6Q86TZ1 520 aa25.09■■□□□ 1.61
PDGFA-204ENST00000405692 CRACR2BQ8N4Y2 399 aaPredicted RBP25.09■■□□□ 1.61
PDGFA-204ENST00000405692 OTUD5Q96G74 571 aa25.09■■□□□ 1.61
PDGFA-204ENST00000405692 PALD1Q9ULE6 856 aa25.09■■□□□ 1.61
PDGFA-204ENST00000405692 RNF113AO15541 343 aaKnown RBP25.08■■□□□ 1.61
PDGFA-204ENST00000405692 ALDH1A1P00352 501 aa25.08■■□□□ 1.61
PDGFA-204ENST00000405692 PPIL2Q13356 520 aa25.08■■□□□ 1.61
PDGFA-204ENST00000405692 OTUD7BQ6GQQ9 843 aa25.08■■□□□ 1.61
PDGFA-204ENST00000405692 SCYL3Q8IZE3 742 aa25.08■■□□□ 1.61
PDGFA-204ENST00000405692 LCORLQ8N3X6 602 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms