RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 ZBTB40Q9NUA8 1239 aa16.31■□□□□ 0.2
SDF4-203ENST00000403997 TLR7Q9NYK1 1049 aaKnown RBP16.31■□□□□ 0.2
SDF4-203ENST00000403997 ZNF112Q9UJU3 913 aa16.31■□□□□ 0.2
SDF4-203ENST00000403997 DBNLQ9UJU6 430 aaKnown RBP16.31■□□□□ 0.2
SDF4-203ENST00000403997 HMMRO75330 724 aa16.3■□□□□ 0.2
SDF4-203ENST00000403997 ZAP70P43403 619 aa16.3■□□□□ 0.2
SDF4-203ENST00000403997 RHBDL3P58872 404 aa16.3■□□□□ 0.2
SDF4-203ENST00000403997 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.3■□□□□ 0.2
SDF4-203ENST00000403997 ZNF512BQ96KM6 892 aaPredicted RBP16.3■□□□□ 0.2
SDF4-203ENST00000403997 NOL10Q9BSC4 688 aaKnown RBP16.3■□□□□ 0.2
SDF4-203ENST00000403997 OTOFQ9HC10 1997 aa16.29■□□□□ 0.2
SDF4-203ENST00000403997 APBB1O00213 710 aa16.29■□□□□ 0.2
SDF4-203ENST00000403997 IRF6O14896 467 aa16.29■□□□□ 0.2
SDF4-203ENST00000403997 CYP2E1P05181 493 aaPredicted RBP16.29■□□□□ 0.2
SDF4-203ENST00000403997 CETPP11597 493 aa16.29■□□□□ 0.2
SDF4-203ENST00000403997 CRHR2Q13324 411 aa16.29■□□□□ 0.2
SDF4-203ENST00000403997 PPIL2Q13356 520 aa16.29■□□□□ 0.2
SDF4-203ENST00000403997 PKN2Q16513 984 aaKnown RBP16.29■□□□□ 0.2
SDF4-203ENST00000403997 NAA16Q6N069 864 aaPredicted RBP16.29■□□□□ 0.2
SDF4-203ENST00000403997 SH3BP5LQ7L8J4 393 aa16.29■□□□□ 0.2
SDF4-203ENST00000403997 AACSQ86V21 672 aa16.29■□□□□ 0.2
SDF4-203ENST00000403997 IL1RAPL2Q9NP60 686 aa16.29■□□□□ 0.2
SDF4-203ENST00000403997 DDTLA6NHG4 134 aaPredicted RBP16.28■□□□□ 0.2
SDF4-203ENST00000403997 MAP4K4O95819 1239 aaPredicted RBP16.28■□□□□ 0.2
SDF4-203ENST00000403997 PPATQ06203 517 aa16.28■□□□□ 0.2
SDF4-203ENST00000403997 SNAPC2Q13487 334 aa16.28■□□□□ 0.2
SDF4-203ENST00000403997 PDE3AQ14432 1141 aa16.28■□□□□ 0.2
SDF4-203ENST00000403997 C20orf194Q5TEA3 1177 aa16.28■□□□□ 0.2
SDF4-203ENST00000403997 SIRT2Q8IXJ6 389 aa16.28■□□□□ 0.2
SDF4-203ENST00000403997 RHPN1Q8TCX5 695 aa16.28■□□□□ 0.2
SDF4-203ENST00000403997 BAG3O95817 575 aa16.27■□□□□ 0.2
SDF4-203ENST00000403997 RGS19P49795 217 aa16.27■□□□□ 0.2
SDF4-203ENST00000403997 TAF1CQ15572 869 aaPredicted RBP16.27■□□□□ 0.2
SDF4-203ENST00000403997 TEX11Q8IYF3 940 aa16.27■□□□□ 0.2
SDF4-203ENST00000403997 BCL11AQ9H165 835 aa16.27■□□□□ 0.2
SDF4-203ENST00000403997 ZFYVE28Q9HCC9 887 aa16.27■□□□□ 0.2
SDF4-203ENST00000403997 PIH1D3Q9NQM4 214 aaKnown RBP16.27■□□□□ 0.2
SDF4-203ENST00000403997 RFX7Q2KHR2 1363 aa16.26■□□□□ 0.19
SDF4-203ENST00000403997 PHF20L1A8MW92 1017 aa16.26■□□□□ 0.19
SDF4-203ENST00000403997 BTBD19C9JJ37 291 aa16.26■□□□□ 0.19
SDF4-203ENST00000403997 NPM3O75607 178 aaKnown RBP16.26■□□□□ 0.19
SDF4-203ENST00000403997 NOL9Q5SY16 702 aaKnown RBP16.26■□□□□ 0.19
SDF4-203ENST00000403997 CLASRPQ8N2M8 674 aaKnown RBP16.26■□□□□ 0.19
SDF4-203ENST00000403997 FAM43AQ8N2R8 423 aa16.26■□□□□ 0.19
SDF4-203ENST00000403997 SH3RF3Q8TEJ3 882 aaPredicted RBP16.26■□□□□ 0.19
SDF4-203ENST00000403997 KIF1BPQ96EK5 621 aa16.26■□□□□ 0.19
SDF4-203ENST00000403997 PICK1Q9NRD5 415 aa16.26■□□□□ 0.19
SDF4-203ENST00000403997 AATFQ9NY61 560 aaKnown RBP eCLIP16.26■□□□□ 0.196e-8■■■■■ 44.5
SDF4-203ENST00000403997 IDH1O75874 414 aaKnown RBP16.25■□□□□ 0.19
SDF4-203ENST00000403997 SLURP2P0DP57 97 aa16.25■□□□□ 0.19
SDF4-203ENST00000403997 PLCG2P16885 1265 aa16.25■□□□□ 0.19
SDF4-203ENST00000403997 MAP3K10Q02779 954 aa16.25■□□□□ 0.19
SDF4-203ENST00000403997 ERO1AQ96HE7 468 aa16.25■□□□□ 0.19
SDF4-203ENST00000403997 HPS5Q9UPZ3 1129 aa16.25■□□□□ 0.19
SDF4-203ENST00000403997 ATRNL1Q5VV63 1379 aa16.25■□□□□ 0.19
SDF4-203ENST00000403997 IGSF3O75054 1194 aa16.24■□□□□ 0.19
SDF4-203ENST00000403997 RAB11FIP3O75154 756 aa16.24■□□□□ 0.19
SDF4-203ENST00000403997 CYP7A1P22680 504 aa16.24■□□□□ 0.19
SDF4-203ENST00000403997 PPP4CP60510 307 aa16.24■□□□□ 0.19
SDF4-203ENST00000403997 SP3Q02447 781 aa16.24■□□□□ 0.19
SDF4-203ENST00000403997 FBXO46Q6PJ61 603 aaPredicted RBP16.24■□□□□ 0.19
SDF4-203ENST00000403997 SCYL3Q8IZE3 742 aa16.24■□□□□ 0.19
SDF4-203ENST00000403997 OSBPL5Q9H0X9 879 aaPredicted RBP16.24■□□□□ 0.19
SDF4-203ENST00000403997 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.24■□□□□ 0.19
SDF4-203ENST00000403997 TRIM17Q9Y577 477 aa16.24■□□□□ 0.19
SDF4-203ENST00000403997 NDUFB9Q9Y6M9 179 aa16.24■□□□□ 0.19
SDF4-203ENST00000403997 TBC1D12O60347 775 aa16.23■□□□□ 0.19
SDF4-203ENST00000403997 CTNND1O60716 968 aaKnown RBP16.23■□□□□ 0.19
SDF4-203ENST00000403997 IFIT2P09913 472 aaKnown RBP16.23■□□□□ 0.19
SDF4-203ENST00000403997 ADGRA1Q86SQ6 560 aa16.23■□□□□ 0.19
SDF4-203ENST00000403997 CD99L2Q8TCZ2 262 aa16.23■□□□□ 0.19
SDF4-203ENST00000403997 TGFBRAP1Q8WUH2 860 aa16.23■□□□□ 0.19
SDF4-203ENST00000403997 ANTXR1Q9H6X2 564 aa16.23■□□□□ 0.19
SDF4-203ENST00000403997 ZCCHC17Q9NP64 241 aaKnown RBP16.23■□□□□ 0.19
SDF4-203ENST00000403997 KCNH4Q9UQ05 1017 aa16.23■□□□□ 0.19
SDF4-203ENST00000403997 ZHX2Q9Y6X8 837 aa16.23■□□□□ 0.19
SDF4-203ENST00000403997 LAMB1P07942 1786 aa16.23■□□□□ 0.19
SDF4-203ENST00000403997 FAM196BA6NMK8 535 aa16.22■□□□□ 0.19
SDF4-203ENST00000403997 CXCL11O14625 94 aa16.22■□□□□ 0.19
SDF4-203ENST00000403997 PTPRAP18433 802 aa16.22■□□□□ 0.19
SDF4-203ENST00000403997 MAP3K12Q12852 859 aa16.22■□□□□ 0.19
SDF4-203ENST00000403997 OTOP1Q7RTM1 612 aa16.22■□□□□ 0.19
SDF4-203ENST00000403997 DYNLL1P63167 89 aaKnown RBP16.21■□□□□ 0.19
SDF4-203ENST00000403997 ANKRD23Q86SG2 305 aa16.21■□□□□ 0.19
SDF4-203ENST00000403997 MAPKAPK5Q8IW41 473 aa16.21■□□□□ 0.19
SDF4-203ENST00000403997 MAGEB6Q8N7X4 407 aa16.21■□□□□ 0.19
SDF4-203ENST00000403997 EFCC1Q9HA90 598 aa16.21■□□□□ 0.19
SDF4-203ENST00000403997 PI4KBQ9UBF8 816 aa16.21■□□□□ 0.19
SDF4-203ENST00000403997 PDHXO00330 501 aa16.2■□□□□ 0.18
SDF4-203ENST00000403997 TLR2O60603 784 aa16.2■□□□□ 0.18
SDF4-203ENST00000403997 ARHGEF6Q15052 776 aa16.2■□□□□ 0.18
SDF4-203ENST00000403997 TTF1Q15361 905 aaPredicted RBP16.2■□□□□ 0.18
SDF4-203ENST00000403997 DHX36Q9H2U1 1008 aaKnown RBP16.2■□□□□ 0.18
SDF4-203ENST00000403997 AFG3L2Q9Y4W6 797 aa16.2■□□□□ 0.18
SDF4-203ENST00000403997 DOCK2Q92608 1830 aa16.19■□□□□ 0.18
SDF4-203ENST00000403997 SOX10P56693 466 aa16.19■□□□□ 0.18
SDF4-203ENST00000403997 MOGSQ13724 837 aa16.19■□□□□ 0.18
SDF4-203ENST00000403997 MIGA1Q8NAN2 632 aa16.19■□□□□ 0.18
SDF4-203ENST00000403997 DNAJC2Q99543 621 aaKnown RBP16.19■□□□□ 0.18
SDF4-203ENST00000403997 SAP30BPQ9UHR5 308 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms