RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 EPB41L4AQ9HCS5 686 aaPredicted RBP39.84■■■■□ 3.97
CSNK1E-204ENST00000403904 CNTNAP1P78357 1384 aa39.83■■■■□ 3.97
CSNK1E-204ENST00000403904 MKRN1Q9UHC7 482 aaKnown RBP39.83■■■■□ 3.97
CSNK1E-204ENST00000403904 NAV1Q8NEY1 1877 aa39.82■■■■□ 3.97
CSNK1E-204ENST00000403904 PTH1RQ03431 593 aa39.82■■■■□ 3.97
CSNK1E-204ENST00000403904 TNFAIP1Q13829 316 aa39.82■■■■□ 3.97
CSNK1E-204ENST00000403904 ANO2Q9NQ90 1003 aa39.82■■■■□ 3.97
CSNK1E-204ENST00000403904 KIAA1211Q6ZU35 1233 aa39.81■■■■□ 3.96
CSNK1E-204ENST00000403904 IFNL3Q8IZI9 196 aa39.81■■■■□ 3.96
CSNK1E-204ENST00000403904 ZNF784Q8NCA9 323 aaPredicted RBP39.81■■■■□ 3.96
CSNK1E-204ENST00000403904 OSBPL5Q9H0X9 879 aaPredicted RBP39.81■■■■□ 3.96
CSNK1E-204ENST00000403904 MYH1P12882 1939 aa39.81■■■■□ 3.96
CSNK1E-204ENST00000403904 ENTPD3O75355 529 aa39.8■■■■□ 3.96
CSNK1E-204ENST00000403904 NPM3O75607 178 aaKnown RBP39.8■■■■□ 3.96
CSNK1E-204ENST00000403904 TNNI2P48788 182 aa39.8■■■■□ 3.96
CSNK1E-204ENST00000403904 RASA3Q14644 834 aa39.8■■■■□ 3.96
CSNK1E-204ENST00000403904 FAM83AQ86UY5 434 aa39.8■■■■□ 3.96
CSNK1E-204ENST00000403904 LDHDQ86WU2 507 aa39.8■■■■□ 3.96
CSNK1E-204ENST00000403904 DEFB129Q9H1M3 183 aa39.8■■■■□ 3.96
CSNK1E-204ENST00000403904 SAP30BPQ9UHR5 308 aaKnown RBP39.8■■■■□ 3.96
CSNK1E-204ENST00000403904 RPAP1Q9BWH6 1393 aaPredicted RBP39.8■■■■□ 3.96
CSNK1E-204ENST00000403904 FAM151AQ8WW52 585 aa39.8■■■■□ 3.96
CSNK1E-204ENST00000403904 DDRGK1Q96HY6 314 aa39.8■■■■□ 3.96
CSNK1E-204ENST00000403904 NACAP1Q9BZK3 213 aa39.8■■■■□ 3.96
CSNK1E-204ENST00000403904 TMEM39BQ9GZU3 492 aa39.8■■■■□ 3.96
CSNK1E-204ENST00000403904 DSCC1Q9BVC3 393 aa39.79■■■■□ 3.96
CSNK1E-204ENST00000403904 LSG1Q9H089 658 aaKnown RBP39.79■■■■□ 3.96
CSNK1E-204ENST00000403904 MCM9Q9NXL9 1143 aa39.79■■■■□ 3.96
CSNK1E-204ENST00000403904 KIF3CO14782 793 aa39.78■■■■□ 3.96
CSNK1E-204ENST00000403904 TDO2P48775 406 aa39.78■■■■□ 3.96
CSNK1E-204ENST00000403904 MAP1SQ66K74 1059 aaPredicted RBP39.78■■■■□ 3.96
CSNK1E-204ENST00000403904 GIMAP6Q6P9H5 292 aa39.78■■■■□ 3.96
CSNK1E-204ENST00000403904 SULF1Q8IWU6 871 aa39.78■■■■□ 3.96
CSNK1E-204ENST00000403904 SLC4A8Q2Y0W8 1093 aa39.77■■■■□ 3.96
CSNK1E-204ENST00000403904 KRT26Q7Z3Y9 468 aa39.77■■■■□ 3.96
CSNK1E-204ENST00000403904 NAPBQ9H115 298 aa39.77■■■■□ 3.96
CSNK1E-204ENST00000403904 PALD1Q9ULE6 856 aa39.77■■■■□ 3.96
CSNK1E-204ENST00000403904 FGAP02671 866 aa39.76■■■■□ 3.96
CSNK1E-204ENST00000403904 DDX60LQ5H9U9 1706 aaKnown RBP39.76■■■■□ 3.96
CSNK1E-204ENST00000403904 ADM5C9JUS6 153 aa39.76■■■■□ 3.95
CSNK1E-204ENST00000403904 ZSCAN29Q8IWY8 852 aaPredicted RBP39.76■■■■□ 3.95
CSNK1E-204ENST00000403904 SEC24BO95487 1268 aa39.75■■■■□ 3.95
CSNK1E-204ENST00000403904 DLK2Q6UY11 383 aa39.75■■■■□ 3.95
CSNK1E-204ENST00000403904 SH3BP5LQ7L8J4 393 aa39.75■■■■□ 3.95
CSNK1E-204ENST00000403904 USP48Q86UV5 1035 aa39.75■■■■□ 3.95
CSNK1E-204ENST00000403904 DDTLA6NHG4 134 aaPredicted RBP39.74■■■■□ 3.95
CSNK1E-204ENST00000403904 USP17L12C9JPN9 530 aa39.74■■■■□ 3.95
CSNK1E-204ENST00000403904 USP17L21D6R901 530 aa39.74■■■■□ 3.95
CSNK1E-204ENST00000403904 REC8O95072 547 aa39.74■■■■□ 3.95
CSNK1E-204ENST00000403904 ALX1Q15699 326 aa39.74■■■■□ 3.95
CSNK1E-204ENST00000403904 PRAMEF18Q5VWM3 479 aa39.74■■■■□ 3.95
CSNK1E-204ENST00000403904 CDAN1Q8IWY9 1227 aa39.74■■■■□ 3.95
CSNK1E-204ENST00000403904 MAP4K1Q92918 833 aa39.74■■■■□ 3.95
CSNK1E-204ENST00000403904 GLIS2Q9BZE0 524 aaPredicted RBP39.74■■■■□ 3.95
CSNK1E-204ENST00000403904 CTR9Q6PD62 1173 aa39.73■■■■□ 3.95
CSNK1E-204ENST00000403904 POLR3DP05423 398 aaPredicted RBP39.72■■■■□ 3.95
CSNK1E-204ENST00000403904 CDC37L1Q7L3B6 337 aa39.72■■■■□ 3.95
CSNK1E-204ENST00000403904 CYP2D7A0A087X1C5 515 aa39.72■■■■□ 3.95
CSNK1E-204ENST00000403904 CYP2D6P10635 497 aa39.72■■■■□ 3.95
CSNK1E-204ENST00000403904 TEPSINQ96N21 525 aa39.72■■■■□ 3.95
CSNK1E-204ENST00000403904 EVX2Q03828 476 aa39.71■■■■□ 3.95
CSNK1E-204ENST00000403904 PPP2R3BQ9Y5P8 575 aa39.71■■■■□ 3.95
CSNK1E-204ENST00000403904 ATRNL1Q5VV63 1379 aa39.7■■■■□ 3.95
CSNK1E-204ENST00000403904 DHX36Q9H2U1 1008 aaKnown RBP39.7■■■■□ 3.95
CSNK1E-204ENST00000403904 ARPP21Q9UBL0 812 aaPredicted RBP39.7■■■■□ 3.95
CSNK1E-204ENST00000403904 MINDY4BA8MYZ0 360 aa39.69■■■■□ 3.94
CSNK1E-204ENST00000403904 PLCD1P51178 756 aa39.69■■■■□ 3.94
CSNK1E-204ENST00000403904 CHADLQ6NUI6 762 aa39.69■■■■□ 3.94
CSNK1E-204ENST00000403904 CSRNP1Q96S65 589 aa39.69■■■■□ 3.94
CSNK1E-204ENST00000403904 COL2A1P02458 1487 aaPredicted RBP39.69■■■■□ 3.94
CSNK1E-204ENST00000403904 ZMYM6O95789 1325 aa39.69■■■■□ 3.94
CSNK1E-204ENST00000403904 SMIM22K7EJ46 135 aa39.68■■■■□ 3.94
CSNK1E-204ENST00000403904 RBM8AQ9Y5S9 174 aaKnown RBP39.68■■■■□ 3.94
CSNK1E-204ENST00000403904 U3KPZ7 1027 aaPredicted RBP39.68■■■■□ 3.94
CSNK1E-204ENST00000403904 SBK1Q52WX2 424 aa39.67■■■■□ 3.94
CSNK1E-204ENST00000403904 C12orf60Q5U649 245 aa39.67■■■■□ 3.94
CSNK1E-204ENST00000403904 AMOTL1Q8IY63 956 aa39.67■■■■□ 3.94
CSNK1E-204ENST00000403904 NBPF12Q5TAG4 269 aaPredicted RBP39.67■■■■□ 3.94
CSNK1E-204ENST00000403904 TTC6Q86TZ1 520 aa39.67■■■■□ 3.94
CSNK1E-204ENST00000403904 CTNNA3Q9UI47 895 aa39.67■■■■□ 3.94
CSNK1E-204ENST00000403904 LAMB1P07942 1786 aa39.66■■■■□ 3.94
CSNK1E-204ENST00000403904 HLA-DOAP06340 250 aa39.65■■■■□ 3.94
CSNK1E-204ENST00000403904 BACH2Q9BYV9 841 aa39.65■■■■□ 3.94
CSNK1E-204ENST00000403904 PI4KBQ9UBF8 816 aa39.65■■■■□ 3.94
CSNK1E-204ENST00000403904 SIPA1L1O43166 1804 aa39.65■■■■□ 3.94
CSNK1E-204ENST00000403904 HAND2P61296 217 aa39.64■■■■□ 3.94
CSNK1E-204ENST00000403904 USP26Q9BXU7 913 aa39.64■■■■□ 3.94
CSNK1E-204ENST00000403904 TRAF5O00463 557 aa39.63■■■■□ 3.94
CSNK1E-204ENST00000403904 EIF5BO60841 1220 aaKnown RBP39.63■■■■□ 3.94
CSNK1E-204ENST00000403904 SLURP2P0DP57 97 aa39.63■■■■□ 3.94
CSNK1E-204ENST00000403904 CDCA5Q96FF9 252 aa39.63■■■■□ 3.94
CSNK1E-204ENST00000403904 PPARAQ07869 468 aa39.63■■■■□ 3.93
CSNK1E-204ENST00000403904 FMR1Q06787 632 aaKnown RBP eCLIP39.62■■■■□ 3.933e-11■■■■■ 66.2
CSNK1E-204ENST00000403904 STK11IPQ8N1F8 1099 aa39.62■■■■□ 3.93
CSNK1E-204ENST00000403904 ZNF213O14771 459 aa39.61■■■■□ 3.93
CSNK1E-204ENST00000403904 IMMTQ16891 758 aaKnown RBP39.61■■■■□ 3.93
CSNK1E-204ENST00000403904 LAMA4Q16363 1823 aa39.61■■■■□ 3.93
CSNK1E-204ENST00000403904 CTDSPL2Q05D32 466 aa39.6■■■■□ 3.93
CSNK1E-204ENST00000403904 NECTIN1Q15223 517 aa39.6■■■■□ 3.93
CSNK1E-204ENST00000403904 MIGA2Q7L4E1 593 aa39.6■■■■□ 3.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms