RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 KIF1AQ12756 1690 aa13.63□□□□□ -0.23
ITSN1-211ENST00000399355 LOC102724428A0A0B4J2F2 783 aa13.62□□□□□ -0.23
ITSN1-211ENST00000399355 PLEKHA8P1O95397 391 aa13.62□□□□□ -0.23
ITSN1-211ENST00000399355 STX17P56962 302 aa13.62□□□□□ -0.23
ITSN1-211ENST00000399355 SIK1P57059 783 aa13.62□□□□□ -0.23
ITSN1-211ENST00000399355 KLHL10Q6JEL2 608 aa13.62□□□□□ -0.23
ITSN1-211ENST00000399355 MYRIPQ8NFW9 859 aa13.62□□□□□ -0.23
ITSN1-211ENST00000399355 ZNF274Q96GC6 653 aaPredicted RBP13.62□□□□□ -0.23
ITSN1-211ENST00000399355 SH2B2O14492 632 aaPredicted RBP13.62□□□□□ -0.23
ITSN1-211ENST00000399355 ZBTB43O43298 467 aa13.62□□□□□ -0.23
ITSN1-211ENST00000399355 PDE8AO60658 829 aa13.62□□□□□ -0.23
ITSN1-211ENST00000399355 CYP7A1P22680 504 aa13.62□□□□□ -0.23
ITSN1-211ENST00000399355 ZRSR1Q15695 479 aaKnown RBP13.62□□□□□ -0.23
ITSN1-211ENST00000399355 NAA16Q6N069 864 aaPredicted RBP13.62□□□□□ -0.23
ITSN1-211ENST00000399355 MAPK8IP1Q9UQF2 711 aa13.62□□□□□ -0.23
ITSN1-211ENST00000399355 TOB1P50616 345 aaPredicted RBP13.61□□□□□ -0.23
ITSN1-211ENST00000399355 GRIK5Q16478 980 aa13.61□□□□□ -0.23
ITSN1-211ENST00000399355 LRRC8AQ8IWT6 810 aa13.61□□□□□ -0.23
ITSN1-211ENST00000399355 TDRD7Q8NHU6 1098 aaKnown RBP13.61□□□□□ -0.23
ITSN1-211ENST00000399355 PLIN2Q99541 437 aa13.61□□□□□ -0.23
ITSN1-211ENST00000399355 MYH2Q9UKX2 1941 aa13.61□□□□□ -0.23
ITSN1-211ENST00000399355 HMGB1P09429 215 aaKnown RBP13.61□□□□□ -0.23
ITSN1-211ENST00000399355 GTF2E1P29083 439 aaPredicted RBP13.61□□□□□ -0.23
ITSN1-211ENST00000399355 PRDX5P30044 214 aa13.61□□□□□ -0.23
ITSN1-211ENST00000399355 AFMP43652 599 aa13.61□□□□□ -0.23
ITSN1-211ENST00000399355 HMGN5P82970 282 aaKnown RBP13.61□□□□□ -0.23
ITSN1-211ENST00000399355 NTRK3Q16288 839 aa13.61□□□□□ -0.23
ITSN1-211ENST00000399355 RBM43Q6ZSC3 357 aaKnown RBP13.61□□□□□ -0.23
ITSN1-211ENST00000399355 ST7Q9NRC1 585 aa13.61□□□□□ -0.23
ITSN1-211ENST00000399355 SPEF2Q9C093 1822 aa13.61□□□□□ -0.23
ITSN1-211ENST00000399355 DDB1Q16531 1140 aa13.61□□□□□ -0.23
ITSN1-211ENST00000399355 AATFQ9NY61 560 aaKnown RBP eCLIP13.61□□□□□ -0.23
ITSN1-211ENST00000399355 KIAA1468Q9P260 1216 aa13.61□□□□□ -0.23
ITSN1-211ENST00000399355 SLC3A2P08195 630 aaKnown RBP13.61□□□□□ -0.23
ITSN1-211ENST00000399355 ERCC3P19447 782 aa13.61□□□□□ -0.23
ITSN1-211ENST00000399355 RASGRP4Q8TDF6 673 aa13.61□□□□□ -0.23
ITSN1-211ENST00000399355 HSD3B7Q9H2F3 369 aa13.61□□□□□ -0.23
ITSN1-211ENST00000399355 CABP5Q9NP86 173 aa13.61□□□□□ -0.23
ITSN1-211ENST00000399355 SLC12A7Q9Y666 1083 aa13.61□□□□□ -0.23
ITSN1-211ENST00000399355 IARSP41252 1262 aaKnown RBP13.6□□□□□ -0.23
ITSN1-211ENST00000399355 PUM3Q15397 648 aaKnown RBP13.6□□□□□ -0.23
ITSN1-211ENST00000399355 STX1AQ16623 288 aa13.6□□□□□ -0.23
ITSN1-211ENST00000399355 ARMCX5Q6P1M9 558 aa13.6□□□□□ -0.23
ITSN1-211ENST00000399355 EPSTI1Q96J88 318 aa13.6□□□□□ -0.23
ITSN1-211ENST00000399355 ALDH8A1Q9H2A2 487 aaPredicted RBP13.6□□□□□ -0.23
ITSN1-211ENST00000399355 ITGB4P16144 1822 aa13.6□□□□□ -0.23
ITSN1-211ENST00000399355 FANCGO15287 622 aa13.6□□□□□ -0.23
ITSN1-211ENST00000399355 KIF3AQ9Y496 699 aa13.6□□□□□ -0.23
ITSN1-211ENST00000399355 METTL16Q86W50 562 aaKnown RBP13.6□□□□□ -0.23
ITSN1-211ENST00000399355 GPR108Q9NPR9 543 aa13.6□□□□□ -0.23
ITSN1-211ENST00000399355 SPTLC3Q9NUV7 552 aa13.6□□□□□ -0.23
ITSN1-211ENST00000399355 FANCLQ9NW38 375 aa13.6□□□□□ -0.23
ITSN1-211ENST00000399355 BCL9O00512 1426 aa13.59□□□□□ -0.23
ITSN1-211ENST00000399355 TNS2Q63HR2 1409 aa13.59□□□□□ -0.23
ITSN1-211ENST00000399355 A0A087X0B3 334 aa13.59□□□□□ -0.23
ITSN1-211ENST00000399355 DIS3L2Q8IYB7 885 aaKnown RBP13.59□□□□□ -0.23
ITSN1-211ENST00000399355 SLC44A5Q8NCS7 719 aa13.59□□□□□ -0.23
ITSN1-211ENST00000399355 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.59□□□□□ -0.23
ITSN1-211ENST00000399355 POLR2DO15514 142 aaKnown RBP13.59□□□□□ -0.23
ITSN1-211ENST00000399355 PCDHA5Q9Y5H7 936 aa13.59□□□□□ -0.23
ITSN1-211ENST00000399355 SYKP43405 635 aa13.59□□□□□ -0.23
ITSN1-211ENST00000399355 CCZ1BP86790 482 aa13.59□□□□□ -0.23
ITSN1-211ENST00000399355 CCZ1P86791 482 aaPredicted RBP13.59□□□□□ -0.23
ITSN1-211ENST00000399355 KCTD19Q17RG1 926 aaPredicted RBP13.59□□□□□ -0.23
ITSN1-211ENST00000399355 ADALQ6DHV7 355 aa13.59□□□□□ -0.23
ITSN1-211ENST00000399355 ZNF396Q96N95 335 aaPredicted RBP13.59□□□□□ -0.23
ITSN1-211ENST00000399355 C8orf37Q96NL8 207 aa13.59□□□□□ -0.23
ITSN1-211ENST00000399355 LLPHQ9BRT6 129 aaKnown RBP13.59□□□□□ -0.23
ITSN1-211ENST00000399355 IRX2Q9BZI1 471 aaPredicted RBP13.59□□□□□ -0.23
ITSN1-211ENST00000399355 RTEL1Q9NZ71 1219 aa13.59□□□□□ -0.23
ITSN1-211ENST00000399355 NUP98P52948 1817 aa13.59□□□□□ -0.23
ITSN1-211ENST00000399355 EIF5P55010 431 aaKnown RBP13.58□□□□□ -0.24
ITSN1-211ENST00000399355 FMR1Q06787 632 aaKnown RBP eCLIP13.58□□□□□ -0.24
ITSN1-211ENST00000399355 ZNF34Q8IZ26 560 aa13.58□□□□□ -0.24
ITSN1-211ENST00000399355 CPLX3Q8WVH0 158 aa13.58□□□□□ -0.24
ITSN1-211ENST00000399355 CTNNA3Q9UI47 895 aa13.58□□□□□ -0.24
ITSN1-211ENST00000399355 NCAPHQ15003 741 aa13.58□□□□□ -0.24
ITSN1-211ENST00000399355 TBC1D9BQ66K14 1250 aa13.58□□□□□ -0.24
ITSN1-211ENST00000399355 MFSD6Q6ZSS7 791 aa13.58□□□□□ -0.24
ITSN1-211ENST00000399355 LPIN2Q92539 896 aa13.58□□□□□ -0.24
ITSN1-211ENST00000399355 PDCL3Q9H2J4 239 aa13.58□□□□□ -0.24
ITSN1-211ENST00000399355 ZNF215Q9UL58 517 aaPredicted RBP13.58□□□□□ -0.24
ITSN1-211ENST00000399355 CAMTA2O94983 1202 aa13.58□□□□□ -0.24
ITSN1-211ENST00000399355 LINC00116Q8NCU8 138 aa13.58□□□□□ -0.24
ITSN1-211ENST00000399355 DESI2Q9BSY9 194 aa13.58□□□□□ -0.24
ITSN1-211ENST00000399355 MYH13Q9UKX3 1938 aa13.58□□□□□ -0.24
ITSN1-211ENST00000399355 FAM170AA1A519 330 aa13.57□□□□□ -0.24
ITSN1-211ENST00000399355 FGFR2P21802 821 aa13.57□□□□□ -0.24
ITSN1-211ENST00000399355 IL6STP40189 918 aaPredicted RBP13.57□□□□□ -0.24
ITSN1-211ENST00000399355 ADKP55263 362 aaKnown RBP13.57□□□□□ -0.24
ITSN1-211ENST00000399355 DIXDC1Q155Q3 683 aa13.57□□□□□ -0.24
ITSN1-211ENST00000399355 DYNLL2Q96FJ2 89 aa13.57□□□□□ -0.24
ITSN1-211ENST00000399355 COL1A1P02452 1464 aaPredicted RBP13.57□□□□□ -0.24
ITSN1-211ENST00000399355 LAMB4A4D0S4 1761 aa13.57□□□□□ -0.24
ITSN1-211ENST00000399355 UBR2Q8IWV8 1755 aa13.57□□□□□ -0.24
ITSN1-211ENST00000399355 MED15Q96RN5 788 aa13.57□□□□□ -0.24
ITSN1-211ENST00000399355 UTP14AQ9BVJ6 771 aaKnown RBP13.57□□□□□ -0.24
ITSN1-211ENST00000399355 CCDC87Q9NVE4 849 aa13.57□□□□□ -0.24
ITSN1-211ENST00000399355 V9GY48 417 aaPredicted RBP13.57□□□□□ -0.24
ITSN1-211ENST00000399355 NCBP1Q09161 790 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms