RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 DCP1AQ9NPI6 582 aaPredicted RBP8.04□□□□□ -1.12
CX3CR1-202ENST00000399220 TRAK2O60296 914 aa8.04□□□□□ -1.12
CX3CR1-202ENST00000399220 EN1Q05925 392 aaPredicted RBP8.04□□□□□ -1.12
CX3CR1-202ENST00000399220 CCDC178Q5BJE1 867 aa8.04□□□□□ -1.12
CX3CR1-202ENST00000399220 HHIPL2Q6UWX4 724 aa8.04□□□□□ -1.12
CX3CR1-202ENST00000399220 RALYLQ86SE5 291 aaKnown RBP8.04□□□□□ -1.12
CX3CR1-202ENST00000399220 CCDC24Q8N4L8 307 aa8.04□□□□□ -1.12
CX3CR1-202ENST00000399220 MPNDQ8N594 471 aa8.04□□□□□ -1.12
CX3CR1-202ENST00000399220 SUPT20HQ8NEM7 779 aa8.04□□□□□ -1.12
CX3CR1-202ENST00000399220 PSMD1Q99460 953 aa8.04□□□□□ -1.12
CX3CR1-202ENST00000399220 BRPF3Q9ULD4 1205 aa8.04□□□□□ -1.12
CX3CR1-202ENST00000399220 H0YIN7 160 aa8.03□□□□□ -1.12
CX3CR1-202ENST00000399220 NPHP1O15259 732 aa8.03□□□□□ -1.12
CX3CR1-202ENST00000399220 PRKAB2O43741 272 aa8.03□□□□□ -1.12
CX3CR1-202ENST00000399220 BAG3O95817 575 aa8.03□□□□□ -1.12
CX3CR1-202ENST00000399220 PRDX5P30044 214 aa8.03□□□□□ -1.12
CX3CR1-202ENST00000399220 NTRK3Q16288 839 aa8.03□□□□□ -1.12
CX3CR1-202ENST00000399220 MFSD6Q6ZSS7 791 aa8.03□□□□□ -1.12
CX3CR1-202ENST00000399220 DICER1Q9UPY3 1922 aaKnown RBP8.03□□□□□ -1.12
CX3CR1-202ENST00000399220 RHBDL3P58872 404 aa8.03□□□□□ -1.12
CX3CR1-202ENST00000399220 C12orf60Q5U649 245 aa8.03□□□□□ -1.12
CX3CR1-202ENST00000399220 ZSWIM5Q9P217 1185 aa8.03□□□□□ -1.12
CX3CR1-202ENST00000399220 MBD3O95983 291 aa8.03□□□□□ -1.12
CX3CR1-202ENST00000399220 FDPSP14324 419 aaKnown RBP8.03□□□□□ -1.12
CX3CR1-202ENST00000399220 APOBRQ0VD83 1088 aa8.03□□□□□ -1.12
CX3CR1-202ENST00000399220 RESTQ13127 1097 aa8.03□□□□□ -1.12
CX3CR1-202ENST00000399220 CSPP1Q1MSJ5 1256 aa8.03□□□□□ -1.12
CX3CR1-202ENST00000399220 APOA5Q6Q788 366 aa8.03□□□□□ -1.12
CX3CR1-202ENST00000399220 C2CD5Q86YS7 1000 aa8.03□□□□□ -1.12
CX3CR1-202ENST00000399220 CDKL5O76039 1030 aa8.02□□□□□ -1.13
CX3CR1-202ENST00000399220 TGFB2P61812 414 aa8.02□□□□□ -1.13
CX3CR1-202ENST00000399220 STRIP1Q5VSL9 837 aa8.02□□□□□ -1.13
CX3CR1-202ENST00000399220 NECAB1Q8N987 351 aa8.02□□□□□ -1.13
CX3CR1-202ENST00000399220 NKX2-3Q8TAU0 364 aa8.02□□□□□ -1.13
CX3CR1-202ENST00000399220 ESR2Q92731 530 aa8.02□□□□□ -1.13
CX3CR1-202ENST00000399220 FAM217BQ9NTX9 383 aaPredicted RBP8.02□□□□□ -1.13
CX3CR1-202ENST00000399220 ABCF2Q9UG63 623 aa8.02□□□□□ -1.13
CX3CR1-202ENST00000399220 NSFL1CQ9UNZ2 370 aaKnown RBP8.02□□□□□ -1.13
CX3CR1-202ENST00000399220 DDAH1O94760 285 aa8.02□□□□□ -1.13
CX3CR1-202ENST00000399220 KCNA3P22001 575 aa8.02□□□□□ -1.13
CX3CR1-202ENST00000399220 TDO2P48775 406 aa8.02□□□□□ -1.13
CX3CR1-202ENST00000399220 ZNF445P59923 1031 aa8.02□□□□□ -1.13
CX3CR1-202ENST00000399220 DYNLL1P63167 89 aaKnown RBP8.02□□□□□ -1.13
CX3CR1-202ENST00000399220 DZIP1Q86YF9 867 aaKnown RBP8.02□□□□□ -1.13
CX3CR1-202ENST00000399220 FOXD4L1Q9NU39 408 aa8.02□□□□□ -1.13
CX3CR1-202ENST00000399220 SLC3A2P08195 630 aaKnown RBP8.01□□□□□ -1.13
CX3CR1-202ENST00000399220 CALM1P0DP23 149 aa8.01□□□□□ -1.13
CX3CR1-202ENST00000399220 CALM2P0DP24 149 aa8.01□□□□□ -1.13
CX3CR1-202ENST00000399220 CALM3P0DP25 149 aa8.01□□□□□ -1.13
CX3CR1-202ENST00000399220 IFNAR1P17181 557 aa8.01□□□□□ -1.13
CX3CR1-202ENST00000399220 KIAA2012Q0VF49 1180 aa8.01□□□□□ -1.13
CX3CR1-202ENST00000399220 SOGA3Q5TF21 947 aa8.01□□□□□ -1.13
CX3CR1-202ENST00000399220 DPP8Q6V1X1 898 aaPredicted RBP8.01□□□□□ -1.13
CX3CR1-202ENST00000399220 PTPDC1A2A3K4 754 aa8.01□□□□□ -1.13
CX3CR1-202ENST00000399220 HAND2P61296 217 aa8.01□□□□□ -1.13
CX3CR1-202ENST00000399220 LARP1BQ659C4 914 aaKnown RBP8.01□□□□□ -1.13
CX3CR1-202ENST00000399220 METTL16Q86W50 562 aaKnown RBP8.01□□□□□ -1.13
CX3CR1-202ENST00000399220 MIGA1Q8NAN2 632 aa8.01□□□□□ -1.13
CX3CR1-202ENST00000399220 SGIP1Q9BQI5 828 aa8.01□□□□□ -1.13
CX3CR1-202ENST00000399220 LTBP3Q9NS15 1303 aa8.01□□□□□ -1.13
CX3CR1-202ENST00000399220 KLF18A0A0U1RQI7 1052 aa8□□□□□ -1.13
CX3CR1-202ENST00000399220 B4E1Z4 1266 aa8□□□□□ -1.13
CX3CR1-202ENST00000399220 ADD1P35611 737 aaKnown RBP8□□□□□ -1.13
CX3CR1-202ENST00000399220 CTDSPL2Q05D32 466 aa8□□□□□ -1.13
CX3CR1-202ENST00000399220 SF3B2Q13435 895 aaKnown RBP8□□□□□ -1.13
CX3CR1-202ENST00000399220 SART3Q15020 963 aaKnown RBP8□□□□□ -1.13
CX3CR1-202ENST00000399220 C16orf86Q6ZW13 317 aa8□□□□□ -1.13
CX3CR1-202ENST00000399220 NBPF11Q86T75 865 aa8□□□□□ -1.13
CX3CR1-202ENST00000399220 SLC51AQ86UW1 340 aa8□□□□□ -1.13
CX3CR1-202ENST00000399220 DGKHQ86XP1 1220 aa8□□□□□ -1.13
CX3CR1-202ENST00000399220 RTKN2Q8IZC4 609 aa8□□□□□ -1.13
CX3CR1-202ENST00000399220 TCEANC2Q96MN5 208 aa8□□□□□ -1.13
CX3CR1-202ENST00000399220 EHD4Q9H223 541 aa8□□□□□ -1.13
CX3CR1-202ENST00000399220 COL4A5P29400 1685 aa8□□□□□ -1.13
CX3CR1-202ENST00000399220 FMNL1O95466 1100 aaPredicted RBP8□□□□□ -1.13
CX3CR1-202ENST00000399220 APPP05067 770 aa8□□□□□ -1.13
CX3CR1-202ENST00000399220 SMARCA1P28370 1054 aa8□□□□□ -1.13
CX3CR1-202ENST00000399220 GRIK5Q16478 980 aa8□□□□□ -1.13
CX3CR1-202ENST00000399220 L1TD1Q5T7N2 865 aaKnown RBP8□□□□□ -1.13
CX3CR1-202ENST00000399220 ZDHHC15Q96MV8 337 aa8□□□□□ -1.13
CX3CR1-202ENST00000399220 ZSCAN10Q96SZ4 725 aaPredicted RBP8□□□□□ -1.13
CX3CR1-202ENST00000399220 RBM28Q9NW13 759 aaKnown RBP8□□□□□ -1.13
CX3CR1-202ENST00000399220 IQSEC3Q9UPP2 1182 aaPredicted RBP8□□□□□ -1.13
CX3CR1-202ENST00000399220 ATRNL1Q5VV63 1379 aa8□□□□□ -1.13
CX3CR1-202ENST00000399220 GABPAQ06546 454 aa8□□□□□ -1.13
CX3CR1-202ENST00000399220 FUT2Q10981 343 aa8□□□□□ -1.13
CX3CR1-202ENST00000399220 DACT2Q5SW24 774 aa8□□□□□ -1.13
CX3CR1-202ENST00000399220 CERS5Q8N5B7 392 aa8□□□□□ -1.13
CX3CR1-202ENST00000399220 SH3RF3Q8TEJ3 882 aaPredicted RBP8□□□□□ -1.13
CX3CR1-202ENST00000399220 SDR42E1Q8WUS8 393 aa8□□□□□ -1.13
CX3CR1-202ENST00000399220 ZC3H12CQ9C0D7 883 aaKnown RBP8□□□□□ -1.13
CX3CR1-202ENST00000399220 CCDC196A0A1B0GTZ2 297 aa7.99□□□□□ -1.13
CX3CR1-202ENST00000399220 ZBTB43O43298 467 aa7.99□□□□□ -1.13
CX3CR1-202ENST00000399220 JAK2O60674 1132 aa7.99□□□□□ -1.13
CX3CR1-202ENST00000399220 KDM4AO75164 1064 aa7.99□□□□□ -1.13
CX3CR1-202ENST00000399220 UBE2HP62256 183 aa7.99□□□□□ -1.13
CX3CR1-202ENST00000399220 PDE4BQ07343 736 aa7.99□□□□□ -1.13
CX3CR1-202ENST00000399220 CDC37L1Q7L3B6 337 aa7.99□□□□□ -1.13
CX3CR1-202ENST00000399220 BRAPQ7Z569 592 aa7.99□□□□□ -1.13
CX3CR1-202ENST00000399220 MTMR14Q8NCE2 650 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms