RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 CRNKL1Q9BZJ0 848 aaKnown RBP30.05■■■□□ 2.4
SHARPIN-202ENST00000398712 FAM43AQ8N2R8 423 aa30.04■■■□□ 2.4
SHARPIN-202ENST00000398712 TRIM44Q96DX7 344 aaPredicted RBP30.04■■■□□ 2.4
SHARPIN-202ENST00000398712 DDX19AQ9NUU7 478 aaKnown RBP30.04■■■□□ 2.4
SHARPIN-202ENST00000398712 BAZ2AQ9UIF9 1905 aaKnown RBP30.04■■■□□ 2.4
SHARPIN-202ENST00000398712 LIG1P18858 919 aa30.03■■■□□ 2.4
SHARPIN-202ENST00000398712 PRDX5P30044 214 aa30.03■■■□□ 2.4
SHARPIN-202ENST00000398712 CDC27P30260 824 aa30.03■■■□□ 2.4
SHARPIN-202ENST00000398712 BRAPQ7Z569 592 aa30.03■■■□□ 2.4
SHARPIN-202ENST00000398712 PGBD1Q96JS3 809 aa30.03■■■□□ 2.4
SHARPIN-202ENST00000398712 RXRAP19793 462 aa30.03■■■□□ 2.4
SHARPIN-202ENST00000398712 RCAN1P53805 252 aa30.03■■■□□ 2.4
SHARPIN-202ENST00000398712 DZIP1Q86YF9 867 aaKnown RBP30.03■■■□□ 2.4
SHARPIN-202ENST00000398712 TDRD7Q8NHU6 1098 aaKnown RBP30.03■■■□□ 2.4
SHARPIN-202ENST00000398712 BICD2Q8TD16 824 aa30.03■■■□□ 2.4
SHARPIN-202ENST00000398712 UBAC1Q9BSL1 405 aa30.03■■■□□ 2.4
SHARPIN-202ENST00000398712 NUP62CLQ9H1M0 184 aa30.03■■■□□ 2.4
SHARPIN-202ENST00000398712 DUOX1Q9NRD9 1551 aa30.02■■■□□ 2.4
SHARPIN-202ENST00000398712 STK36Q9NRP7 1315 aa30.01■■■□□ 2.39
SHARPIN-202ENST00000398712 POLRMTO00411 1230 aaKnown RBP30.01■■■□□ 2.39
SHARPIN-202ENST00000398712 BBOX1O75936 387 aa30.01■■■□□ 2.39
SHARPIN-202ENST00000398712 ATP2B4P23634 1241 aa30.01■■■□□ 2.39
SHARPIN-202ENST00000398712 IARSP41252 1262 aaKnown RBP30.01■■■□□ 2.39
SHARPIN-202ENST00000398712 RNF214Q8ND24 703 aa30.01■■■□□ 2.39
SHARPIN-202ENST00000398712 USP28Q96RU2 1077 aa30.01■■■□□ 2.39
SHARPIN-202ENST00000398712 ALG1Q9BT22 464 aa30.01■■■□□ 2.39
SHARPIN-202ENST00000398712 ATP8A2Q9NTI2 1148 aa30.01■■■□□ 2.39
SHARPIN-202ENST00000398712 LAMB1P07942 1786 aa30.01■■■□□ 2.39
SHARPIN-202ENST00000398712 DDR1Q08345 913 aa30■■■□□ 2.39
SHARPIN-202ENST00000398712 NTRK3Q16288 839 aa30■■■□□ 2.39
SHARPIN-202ENST00000398712 STK11IPQ8N1F8 1099 aa30■■■□□ 2.39
SHARPIN-202ENST00000398712 PROM2Q8N271 834 aa30■■■□□ 2.39
SHARPIN-202ENST00000398712 AATFQ9NY61 560 aaKnown RBP eCLIP30■■■□□ 2.39
SHARPIN-202ENST00000398712 ECM29Q5VYK3 1845 aa30■■■□□ 2.39
SHARPIN-202ENST00000398712 HOXA10P31260 410 aaPredicted RBP30■■■□□ 2.39
SHARPIN-202ENST00000398712 GPSM2P81274 684 aa30■■■□□ 2.39
SHARPIN-202ENST00000398712 CEBPZQ03701 1054 aaKnown RBP30■■■□□ 2.39
SHARPIN-202ENST00000398712 OTUD7BQ6GQQ9 843 aa30■■■□□ 2.39
SHARPIN-202ENST00000398712 CCDC144CPQ8IYA2 1237 aa30■■■□□ 2.39
SHARPIN-202ENST00000398712 FAM217BQ9NTX9 383 aaPredicted RBP30■■■□□ 2.39
SHARPIN-202ENST00000398712 LDHBP07195 334 aaKnown RBP29.99■■■□□ 2.39
SHARPIN-202ENST00000398712 UVSSAQ2YD98 709 aa29.99■■■□□ 2.39
SHARPIN-202ENST00000398712 CTR9Q6PD62 1173 aa29.99■■■□□ 2.39
SHARPIN-202ENST00000398712 ZKSCAN3Q9BRR0 538 aa29.99■■■□□ 2.39
SHARPIN-202ENST00000398712 MYL10Q9BUA6 226 aa29.99■■■□□ 2.39
SHARPIN-202ENST00000398712 DACT1Q9NYF0 836 aa29.99■■■□□ 2.39
SHARPIN-202ENST00000398712 FGRP09769 529 aa29.98■■■□□ 2.39
SHARPIN-202ENST00000398712 MAP3K11Q16584 847 aa29.98■■■□□ 2.39
SHARPIN-202ENST00000398712 CRAMP1Q96RY5 1269 aa29.98■■■□□ 2.39
SHARPIN-202ENST00000398712 FUCA2Q9BTY2 467 aa29.98■■■□□ 2.39
SHARPIN-202ENST00000398712 RTEL1Q9NZ71 1219 aa29.98■■■□□ 2.39
SHARPIN-202ENST00000398712 CCDC196A0A1B0GTZ2 297 aa29.98■■■□□ 2.39
SHARPIN-202ENST00000398712 GSTO1P78417 241 aa29.98■■■□□ 2.39
SHARPIN-202ENST00000398712 SSRP1Q08945 709 aaKnown RBP29.98■■■□□ 2.39
SHARPIN-202ENST00000398712 WASF1Q92558 559 aa29.98■■■□□ 2.39
SHARPIN-202ENST00000398712 GGA1Q9UJY5 639 aa29.98■■■□□ 2.39
SHARPIN-202ENST00000398712 PLSCR1O15162 318 aa29.97■■■□□ 2.39
SHARPIN-202ENST00000398712 UFL1O94874 794 aa29.97■■■□□ 2.39
SHARPIN-202ENST00000398712 IFNAR1P17181 557 aa29.97■■■□□ 2.39
SHARPIN-202ENST00000398712 RTN1Q16799 776 aa29.97■■■□□ 2.39
SHARPIN-202ENST00000398712 PHKBQ93100 1093 aa29.97■■■□□ 2.39
SHARPIN-202ENST00000398712 DCP1AQ9NPI6 582 aaPredicted RBP29.97■■■□□ 2.39
SHARPIN-202ENST00000398712 ARPP21Q9UBL0 812 aaPredicted RBP29.97■■■□□ 2.39
SHARPIN-202ENST00000398712 EP400Q96L91 3159 aa29.96■■■□□ 2.39
SHARPIN-202ENST00000398712 KLRG2A4D1S0 409 aaPredicted RBP29.96■■■□□ 2.39
SHARPIN-202ENST00000398712 USP17L12C9JPN9 530 aa29.96■■■□□ 2.39
SHARPIN-202ENST00000398712 USP17L21D6R901 530 aa29.96■■■□□ 2.39
SHARPIN-202ENST00000398712 SLC3A2P08195 630 aaKnown RBP29.96■■■□□ 2.39
SHARPIN-202ENST00000398712 CCDC192P0DO97 292 aa29.96■■■□□ 2.39
SHARPIN-202ENST00000398712 KIF23Q02241 960 aaPredicted RBP29.96■■■□□ 2.39
SHARPIN-202ENST00000398712 ILDR2Q71H61 639 aa29.96■■■□□ 2.39
SHARPIN-202ENST00000398712 TMC4Q7Z404 712 aa29.96■■■□□ 2.39
SHARPIN-202ENST00000398712 PDLIM2Q96JY6 352 aa29.96■■■□□ 2.39
SHARPIN-202ENST00000398712 TNMDQ9H2S6 317 aa29.96■■■□□ 2.39
SHARPIN-202ENST00000398712 CLSTN2Q9H4D0 955 aa29.96■■■□□ 2.39
SHARPIN-202ENST00000398712 JAG2Q9Y219 1238 aa29.96■■■□□ 2.39
SHARPIN-202ENST00000398712 FMNL1O95466 1100 aaPredicted RBP29.95■■■□□ 2.39
SHARPIN-202ENST00000398712 TRIM29Q14134 588 aa29.95■■■□□ 2.39
SHARPIN-202ENST00000398712 SEC23AQ15436 765 aa29.95■■■□□ 2.39
SHARPIN-202ENST00000398712 FTOQ9C0B1 505 aaKnown RBP eCLIP29.95■■■□□ 2.39
SHARPIN-202ENST00000398712 TNKSO95271 1327 aa29.95■■■□□ 2.39
SHARPIN-202ENST00000398712 MYH2Q9UKX2 1941 aa29.95■■■□□ 2.38
SHARPIN-202ENST00000398712 RANBP6O60518 1105 aaKnown RBP29.95■■■□□ 2.38
SHARPIN-202ENST00000398712 PPP2R5BQ15173 497 aa29.95■■■□□ 2.38
SHARPIN-202ENST00000398712 SBK1Q52WX2 424 aa29.95■■■□□ 2.38
SHARPIN-202ENST00000398712 MYSM1Q5VVJ2 828 aa29.95■■■□□ 2.38
SHARPIN-202ENST00000398712 SLC51AQ86UW1 340 aa29.95■■■□□ 2.38
SHARPIN-202ENST00000398712 ZNF654Q8IZM8 581 aa29.95■■■□□ 2.38
SHARPIN-202ENST00000398712 PODXL2Q9NZ53 605 aa29.95■■■□□ 2.38
SHARPIN-202ENST00000398712 DLEC1Q9Y238 1755 aa29.94■■■□□ 2.38
SHARPIN-202ENST00000398712 CYP2D7A0A087X1C5 515 aa29.94■■■□□ 2.38
SHARPIN-202ENST00000398712 IQCA1Q86XH1 822 aa29.94■■■□□ 2.38
SHARPIN-202ENST00000398712 TRIM22Q8IYM9 498 aa29.94■■■□□ 2.38
SHARPIN-202ENST00000398712 ZSCAN10Q96SZ4 725 aaPredicted RBP29.94■■■□□ 2.38
SHARPIN-202ENST00000398712 SLC26A6Q9BXS9 759 aa29.94■■■□□ 2.38
SHARPIN-202ENST00000398712 POLR3EQ9NVU0 708 aa29.94■■■□□ 2.38
SHARPIN-202ENST00000398712 LRRC37AA6NMS7 1700 aa29.93■■■□□ 2.38
SHARPIN-202ENST00000398712 YEATS4O95619 227 aa29.93■■■□□ 2.38
SHARPIN-202ENST00000398712 KRT40Q6A162 431 aa29.93■■■□□ 2.38
SHARPIN-202ENST00000398712 ORC4O43929 436 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 155.3 ms