RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 ERO1AQ96HE7 468 aa23.22■■□□□ 1.31
MCF2L-207ENST00000397024 GPR108Q9NPR9 543 aa23.22■■□□□ 1.31
MCF2L-207ENST00000397024 DDTLA6NHG4 134 aaPredicted RBP23.21■■□□□ 1.31
MCF2L-207ENST00000397024 PHF20L1A8MW92 1017 aa23.21■■□□□ 1.31
MCF2L-207ENST00000397024 TNNI3KQ59H18 835 aa23.21■■□□□ 1.31
MCF2L-207ENST00000397024 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.21■■□□□ 1.31
MCF2L-207ENST00000397024 DBNDD2Q9BQY9 259 aa23.21■■□□□ 1.31
MCF2L-207ENST00000397024 ZFYVE28Q9HCC9 887 aa23.21■■□□□ 1.31
MCF2L-207ENST00000397024 SNRKQ9NRH2 765 aa23.21■■□□□ 1.31
MCF2L-207ENST00000397024 NOP58Q9Y2X3 529 aaKnown RBP23.21■■□□□ 1.31
MCF2L-207ENST00000397024 FPGT-TNNI3KV9GXZ4 949 aa23.21■■□□□ 1.31
MCF2L-207ENST00000397024 UQCRFS1P1P0C7P4 283 aa23.2■■□□□ 1.3
MCF2L-207ENST00000397024 MAP3K10Q02779 954 aa23.2■■□□□ 1.3
MCF2L-207ENST00000397024 OS9Q13438 667 aaPredicted RBP23.2■■□□□ 1.3
MCF2L-207ENST00000397024 PICALMQ13492 652 aa23.19■■□□□ 1.3
MCF2L-207ENST00000397024 NOL9Q5SY16 702 aaKnown RBP23.19■■□□□ 1.3
MCF2L-207ENST00000397024 EFCC1Q9HA90 598 aa23.19■■□□□ 1.3
MCF2L-207ENST00000397024 RAI14Q9P0K7 980 aa23.19■■□□□ 1.3
MCF2L-207ENST00000397024 PTPN22Q9Y2R2 807 aa23.19■■□□□ 1.3
MCF2L-207ENST00000397024 MOGSQ13724 837 aa23.18■■□□□ 1.3
MCF2L-207ENST00000397024 ZSCAN29Q8IWY8 852 aaPredicted RBP23.18■■□□□ 1.3
MCF2L-207ENST00000397024 KCNH4Q9UQ05 1017 aa23.18■■□□□ 1.3
MCF2L-207ENST00000397024 LDHCP07864 332 aa23.17■■□□□ 1.3
MCF2L-207ENST00000397024 CEP85Q6P2H3 762 aa23.17■■□□□ 1.3
MCF2L-207ENST00000397024 TLR2O60603 784 aa23.16■■□□□ 1.3
MCF2L-207ENST00000397024 GSTO1P78417 241 aa23.16■■□□□ 1.3
MCF2L-207ENST00000397024 TTC39AQ5SRH9 613 aa23.16■■□□□ 1.3
MCF2L-207ENST00000397024 CCDC8Q9H0W5 538 aaPredicted RBP23.16■■□□□ 1.3
MCF2L-207ENST00000397024 TLR7Q9NYK1 1049 aaKnown RBP23.16■■□□□ 1.3
MCF2L-207ENST00000397024 LRP2BPQ9P2M1 347 aa23.16■■□□□ 1.3
MCF2L-207ENST00000397024 DOCK2Q92608 1830 aa23.15■■□□□ 1.3
MCF2L-207ENST00000397024 CYP2E1P05181 493 aaPredicted RBP23.15■■□□□ 1.3
MCF2L-207ENST00000397024 CCDC158Q5M9N0 1113 aa23.15■■□□□ 1.3
MCF2L-207ENST00000397024 EAF2Q96CJ1 260 aaPredicted RBP23.15■■□□□ 1.3
MCF2L-207ENST00000397024 ZCCHC17Q9NP64 241 aaKnown RBP23.15■■□□□ 1.3
MCF2L-207ENST00000397024 DBNLQ9UJU6 430 aaKnown RBP23.15■■□□□ 1.3
MCF2L-207ENST00000397024 PDE4DIPQ5VU43 2346 aa23.15■■□□□ 1.3
MCF2L-207ENST00000397024 NPM3O75607 178 aaKnown RBP23.14■■□□□ 1.29
MCF2L-207ENST00000397024 ANKRD23Q86SG2 305 aa23.14■■□□□ 1.29
MCF2L-207ENST00000397024 SCYL3Q8IZE3 742 aa23.14■■□□□ 1.29
MCF2L-207ENST00000397024 ARHGAP39Q9C0H5 1083 aa23.14■■□□□ 1.29
MCF2L-207ENST00000397024 ZHX2Q9Y6X8 837 aa23.14■■□□□ 1.29
MCF2L-207ENST00000397024 PTPRAP18433 802 aa23.13■■□□□ 1.29
MCF2L-207ENST00000397024 ZAP70P43403 619 aa23.13■■□□□ 1.29
MCF2L-207ENST00000397024 GPAT2Q6NUI2 795 aa23.13■■□□□ 1.29
MCF2L-207ENST00000397024 ZNF512BQ96KM6 892 aaPredicted RBP23.13■■□□□ 1.29
MCF2L-207ENST00000397024 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.13■■□□□ 1.29
MCF2L-207ENST00000397024 MYO5AQ9Y4I1 1855 aaKnown RBP23.13■■□□□ 1.29
MCF2L-207ENST00000397024 FAM196BA6NMK8 535 aa23.12■■□□□ 1.29
MCF2L-207ENST00000397024 PDHXO00330 501 aa23.12■■□□□ 1.29
MCF2L-207ENST00000397024 CXCL11O14625 94 aa23.12■■□□□ 1.29
MCF2L-207ENST00000397024 C17orf99Q6UX52 265 aa23.12■■□□□ 1.29
MCF2L-207ENST00000397024 SH3RF3Q8TEJ3 882 aaPredicted RBP23.12■■□□□ 1.29
MCF2L-207ENST00000397024 PIH1D3Q9NQM4 214 aaKnown RBP23.12■■□□□ 1.29
MCF2L-207ENST00000397024 EXOC6BQ9Y2D4 811 aa23.12■■□□□ 1.29
MCF2L-207ENST00000397024 BRCA2P51587 3418 aa23.12■■□□□ 1.29
MCF2L-207ENST00000397024 MKI67P46013 3256 aaKnown RBP23.12■■□□□ 1.29
MCF2L-207ENST00000397024 ZSWIM8A7E2V4 1837 aa23.11■■□□□ 1.29
MCF2L-207ENST00000397024 MAP4K4O95819 1239 aaPredicted RBP23.11■■□□□ 1.29
MCF2L-207ENST00000397024 ADGRA1Q86SQ6 560 aa23.11■■□□□ 1.29
MCF2L-207ENST00000397024 CCDC84Q86UT8 332 aaPredicted RBP23.11■■□□□ 1.29
MCF2L-207ENST00000397024 CPA4Q9UI42 421 aa23.11■■□□□ 1.29
MCF2L-207ENST00000397024 AFG3L2Q9Y4W6 797 aa23.11■■□□□ 1.29
MCF2L-207ENST00000397024 TBC1D12O60347 775 aa23.1■■□□□ 1.29
MCF2L-207ENST00000397024 CTNND1O60716 968 aaKnown RBP23.1■■□□□ 1.29
MCF2L-207ENST00000397024 NAA16Q6N069 864 aaPredicted RBP23.1■■□□□ 1.29
MCF2L-207ENST00000397024 TEX11Q8IYF3 940 aa23.1■■□□□ 1.29
MCF2L-207ENST00000397024 OSBPL5Q9H0X9 879 aaPredicted RBP23.1■■□□□ 1.29
MCF2L-207ENST00000397024 PICK1Q9NRD5 415 aa23.1■■□□□ 1.29
MCF2L-207ENST00000397024 AATFQ9NY61 560 aaKnown RBP eCLIP23.1■■□□□ 1.29
MCF2L-207ENST00000397024 KIAA0100Q14667 2235 aaKnown RBP23.1■■□□□ 1.29
MCF2L-207ENST00000397024 ADGRA2Q96PE1 1338 aa23.09■■□□□ 1.29
MCF2L-207ENST00000397024 POTEFA5A3E0 1075 aa23.09■■□□□ 1.29
MCF2L-207ENST00000397024 ECM2O94769 699 aaPredicted RBP23.09■■□□□ 1.29
MCF2L-207ENST00000397024 CTGFP29279 349 aa23.09■■□□□ 1.29
MCF2L-207ENST00000397024 PPP4CP60510 307 aa23.09■■□□□ 1.29
MCF2L-207ENST00000397024 LACTBP83111 547 aaPredicted RBP23.09■■□□□ 1.29
MCF2L-207ENST00000397024 RRP1BQ14684 758 aaKnown RBP23.09■■□□□ 1.29
MCF2L-207ENST00000397024 PTCH2Q9Y6C5 1203 aa23.09■■□□□ 1.29
MCF2L-207ENST00000397024 NDUFB9Q9Y6M9 179 aa23.09■■□□□ 1.29
MCF2L-207ENST00000397024 A0A0G2JLL6 359 aaPredicted RBP23.08■■□□□ 1.29
MCF2L-207ENST00000397024 PRRT2Q7Z6L0 340 aaPredicted RBP23.08■■□□□ 1.29
MCF2L-207ENST00000397024 ARMC5Q96C12 935 aa23.08■■□□□ 1.29
MCF2L-207ENST00000397024 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.08■■□□□ 1.29
MCF2L-207ENST00000397024 COG6Q9Y2V7 657 aa23.08■■□□□ 1.29
MCF2L-207ENST00000397024 ARHGEF6Q15052 776 aa23.07■■□□□ 1.28
MCF2L-207ENST00000397024 SIRT2Q8IXJ6 389 aa23.07■■□□□ 1.28
MCF2L-207ENST00000397024 PHIPQ8WWQ0 1821 aa23.07■■□□□ 1.28
MCF2L-207ENST00000397024 COL2A1P02458 1487 aaPredicted RBP23.06■■□□□ 1.28
MCF2L-207ENST00000397024 CYP2C8P10632 490 aa23.06■■□□□ 1.28
MCF2L-207ENST00000397024 ZBTB40Q9NUA8 1239 aa23.06■■□□□ 1.28
MCF2L-207ENST00000397024 DOCK1Q14185 1865 aa23.05■■□□□ 1.28
MCF2L-207ENST00000397024 BAG3O95817 575 aa23.05■■□□□ 1.28
MCF2L-207ENST00000397024 MS4A1P11836 297 aa23.05■■□□□ 1.28
MCF2L-207ENST00000397024 DYNLL1P63167 89 aaKnown RBP23.05■■□□□ 1.28
MCF2L-207ENST00000397024 GADL1Q6ZQY3 521 aa23.05■■□□□ 1.28
MCF2L-207ENST00000397024 FASTKD5Q7L8L6 764 aaKnown RBP23.05■■□□□ 1.28
MCF2L-207ENST00000397024 AACSQ86V21 672 aa23.05■■□□□ 1.28
MCF2L-207ENST00000397024 TGFBRAP1Q8WUH2 860 aa23.05■■□□□ 1.28
MCF2L-207ENST00000397024 NOL10Q9BSC4 688 aaKnown RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms