RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 IMMTQ16891 758 aaKnown RBP10.07□□□□□ -0.8
RTN4-206ENST00000394611 ATRIPQ8WXE1 791 aa10.07□□□□□ -0.8
RTN4-206ENST00000394611 RIN2Q8WYP3 895 aaPredicted RBP10.07□□□□□ -0.8
RTN4-206ENST00000394611 KCNJ14Q9UNX9 436 aa10.07□□□□□ -0.8
RTN4-206ENST00000394611 CTAGE15A4D2H0 777 aa10.07□□□□□ -0.8
RTN4-206ENST00000394611 PRC1O43663 620 aa10.07□□□□□ -0.8
RTN4-206ENST00000394611 CYP21A2P08686 494 aa10.07□□□□□ -0.8
RTN4-206ENST00000394611 CTAGE8P0CG41 777 aa10.07□□□□□ -0.8
RTN4-206ENST00000394611 RXRBP28702 533 aa10.07□□□□□ -0.8
RTN4-206ENST00000394611 CTAGE6Q86UF2 777 aa10.07□□□□□ -0.8
RTN4-206ENST00000394611 CTAGE4Q8IX94 777 aa10.07□□□□□ -0.8
RTN4-206ENST00000394611 HELBQ8NG08 1087 aaPredicted RBP10.07□□□□□ -0.8
RTN4-206ENST00000394611 WDR24Q96S15 920 aa10.07□□□□□ -0.8
RTN4-206ENST00000394611 CDC5LQ99459 802 aaKnown RBP10.07□□□□□ -0.8
RTN4-206ENST00000394611 TANGO6Q9C0B7 1094 aa10.07□□□□□ -0.8
RTN4-206ENST00000394611 POLR2DO15514 142 aaKnown RBP10.06□□□□□ -0.8
RTN4-206ENST00000394611 PHKG2P15735 406 aa10.06□□□□□ -0.8
RTN4-206ENST00000394611 E4F1Q66K89 784 aaPredicted RBP10.06□□□□□ -0.8
RTN4-206ENST00000394611 KIAA1468Q9P260 1216 aa10.06□□□□□ -0.8
RTN4-206ENST00000394611 DBF4Q9UBU7 674 aaPredicted RBP10.06□□□□□ -0.8
RTN4-206ENST00000394611 ADAM21Q9UKJ8 722 aa10.06□□□□□ -0.8
RTN4-206ENST00000394611 PPP2R2CQ9Y2T4 447 aa10.06□□□□□ -0.8
RTN4-206ENST00000394611 ZNF853P0CG23 659 aa10.06□□□□□ -0.8
RTN4-206ENST00000394611 PFKFB1P16118 471 aa10.06□□□□□ -0.8
RTN4-206ENST00000394611 MYL5Q02045 173 aa10.06□□□□□ -0.8
RTN4-206ENST00000394611 LONRF2Q1L5Z9 754 aa10.06□□□□□ -0.8
RTN4-206ENST00000394611 LRRFIP1Q32MZ4 808 aaKnown RBP10.06□□□□□ -0.8
RTN4-206ENST00000394611 KCTD16Q68DU8 428 aa10.06□□□□□ -0.8
RTN4-206ENST00000394611 ARMCX5Q6P1M9 558 aa10.06□□□□□ -0.8
RTN4-206ENST00000394611 GIMAP7Q8NHV1 300 aa10.06□□□□□ -0.8
RTN4-206ENST00000394611 TTC14Q96N46 770 aa10.06□□□□□ -0.8
RTN4-206ENST00000394611 ABCF2Q9UG63 623 aa10.06□□□□□ -0.8
RTN4-206ENST00000394611 MORC2Q9Y6X9 1032 aaPredicted RBP10.06□□□□□ -0.8
RTN4-206ENST00000394611 ERICH2A1L162 156 aa10.06□□□□□ -0.8
RTN4-206ENST00000394611 SOWAHDA6NJG2 315 aa10.06□□□□□ -0.8
RTN4-206ENST00000394611 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.06□□□□□ -0.8
RTN4-206ENST00000394611 FAM212AQ96EL1 285 aa10.06□□□□□ -0.8
RTN4-206ENST00000394611 CCDC113Q9H0I3 377 aa10.06□□□□□ -0.8
RTN4-206ENST00000394611 SHANK3Q9BYB0 1731 aa10.06□□□□□ -0.8
RTN4-206ENST00000394611 PKD1L3Q7Z443 1732 aa10.05□□□□□ -0.8
RTN4-206ENST00000394611 GOLGA8AA7E2F4 631 aa10.05□□□□□ -0.8
RTN4-206ENST00000394611 ZNF213O14771 459 aa10.05□□□□□ -0.8
RTN4-206ENST00000394611 MYO1BO43795 1136 aa10.05□□□□□ -0.8
RTN4-206ENST00000394611 MARCH6O60337 910 aa10.05□□□□□ -0.8
RTN4-206ENST00000394611 HPDP32754 393 aaPredicted RBP10.05□□□□□ -0.8
RTN4-206ENST00000394611 METAP2P50579 478 aaKnown RBP eCLIP10.05□□□□□ -0.8
RTN4-206ENST00000394611 ARID5AQ03989 594 aa10.05□□□□□ -0.8
RTN4-206ENST00000394611 MCMDC2Q4G0Z9 681 aa10.05□□□□□ -0.8
RTN4-206ENST00000394611 PLA2G4DQ86XP0 818 aa10.05□□□□□ -0.8
RTN4-206ENST00000394611 IFNL2Q8IZJ0 200 aa10.05□□□□□ -0.8
RTN4-206ENST00000394611 MARCH10Q8NA82 808 aaPredicted RBP10.05□□□□□ -0.8
RTN4-206ENST00000394611 CDCA7Q9BWT1 371 aaPredicted RBP10.05□□□□□ -0.8
RTN4-206ENST00000394611 ZHX3Q9H4I2 956 aa10.05□□□□□ -0.8
RTN4-206ENST00000394611 CNNM1Q9NRU3 951 aa10.05□□□□□ -0.8
RTN4-206ENST00000394611 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.05□□□□□ -0.8
RTN4-206ENST00000394611 PCDH11XQ9BZA7 1347 aa10.05□□□□□ -0.8
RTN4-206ENST00000394611 PCDH11YQ9BZA8 1340 aa10.05□□□□□ -0.8
RTN4-206ENST00000394611 LRRC37A3O60309 1634 aa10.05□□□□□ -0.8
RTN4-206ENST00000394611 FOXN1O15353 648 aa10.05□□□□□ -0.8
RTN4-206ENST00000394611 CCDC175P0C221 793 aa10.05□□□□□ -0.8
RTN4-206ENST00000394611 CCT5P48643 541 aa10.05□□□□□ -0.8
RTN4-206ENST00000394611 TDO2P48775 406 aa10.05□□□□□ -0.8
RTN4-206ENST00000394611 CT47A1Q5JQC4 288 aaPredicted RBP10.05□□□□□ -0.8
RTN4-206ENST00000394611 AKAP4Q5JQC9 854 aa10.05□□□□□ -0.8
RTN4-206ENST00000394611 TOGARAM2Q6ZUX3 1019 aa10.05□□□□□ -0.8
RTN4-206ENST00000394611 SCLT1Q96NL6 688 aa10.05□□□□□ -0.8
RTN4-206ENST00000394611 FEZ2Q9UHY8 353 aaPredicted RBP10.05□□□□□ -0.8
RTN4-206ENST00000394611 EIF4E1BA6NMX2 242 aaKnown RBP10.05□□□□□ -0.8
RTN4-206ENST00000394611 CTIFO43310 598 aaKnown RBP10.05□□□□□ -0.8
RTN4-206ENST00000394611 NCAPH2Q6IBW4 605 aa10.05□□□□□ -0.8
RTN4-206ENST00000394611 FOXR1Q6PIV2 292 aa10.05□□□□□ -0.8
RTN4-206ENST00000394611 PI16Q6UXB8 463 aa10.05□□□□□ -0.8
RTN4-206ENST00000394611 CEP126Q9P2H0 1117 aa10.05□□□□□ -0.8
RTN4-206ENST00000394611 MAP3K5Q99683 1374 aa10.05□□□□□ -0.8
RTN4-206ENST00000394611 SMIM23A6NLE4 172 aa10.04□□□□□ -0.8
RTN4-206ENST00000394611 IFIT3O14879 490 aaKnown RBP10.04□□□□□ -0.8
RTN4-206ENST00000394611 ONECUT3O60422 494 aaPredicted RBP10.04□□□□□ -0.8
RTN4-206ENST00000394611 CCZ1BP86790 482 aa10.04□□□□□ -0.8
RTN4-206ENST00000394611 CCZ1P86791 482 aaPredicted RBP10.04□□□□□ -0.8
RTN4-206ENST00000394611 HLTFQ14527 1009 aaKnown RBP eCLIP10.04□□□□□ -0.81e-8■■□□□ 13
RTN4-206ENST00000394611 DHX32Q7L7V1 743 aaKnown RBP10.04□□□□□ -0.8
RTN4-206ENST00000394611 IGSF22Q8N9C0 903 aa10.04□□□□□ -0.8
RTN4-206ENST00000394611 ACRBPQ8NEB7 543 aa10.04□□□□□ -0.8
RTN4-206ENST00000394611 SSH3Q8TE77 659 aa10.04□□□□□ -0.8
RTN4-206ENST00000394611 IFT81Q8WYA0 676 aa10.04□□□□□ -0.8
RTN4-206ENST00000394611 UBAC1Q9BSL1 405 aa10.04□□□□□ -0.8
RTN4-206ENST00000394611 FAM204AQ9H8W3 233 aa10.04□□□□□ -0.8
RTN4-206ENST00000394611 EP400Q96L91 3159 aa10.04□□□□□ -0.8
RTN4-206ENST00000394611 SHTN1A0MZ66 631 aa10.04□□□□□ -0.8
RTN4-206ENST00000394611 IARSP41252 1262 aaKnown RBP10.04□□□□□ -0.8
RTN4-206ENST00000394611 CDR1P51861 262 aa10.04□□□□□ -0.8
RTN4-206ENST00000394611 TOB2Q14106 344 aaPredicted RBP10.04□□□□□ -0.8
RTN4-206ENST00000394611 CCDC158Q5M9N0 1113 aa10.04□□□□□ -0.8
RTN4-206ENST00000394611 BLZF1Q9H2G9 400 aa10.04□□□□□ -0.8
RTN4-206ENST00000394611 ZNF446Q9NWS9 450 aa10.04□□□□□ -0.8
RTN4-206ENST00000394611 TFR2Q9UP52 801 aa10.04□□□□□ -0.8
RTN4-206ENST00000394611 TNS2Q63HR2 1409 aa10.04□□□□□ -0.8
RTN4-206ENST00000394611 CTAGE9A4FU28 777 aa10.04□□□□□ -0.8
RTN4-206ENST00000394611 MRFAP1L1Q96HT8 127 aa10.04□□□□□ -0.8
RTN4-206ENST00000394611 OSBPL3Q9H4L5 887 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms