RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 MGAMO43451 1857 aa10.01□□□□□ -0.81
GAPVD1-204ENST00000394083 GOLGA6L3A6NEY3 463 aa10.01□□□□□ -0.81
GAPVD1-204ENST00000394083 KIF23Q02241 960 aaPredicted RBP10.01□□□□□ -0.81
GAPVD1-204ENST00000394083 TPRNQ4KMQ1 711 aa10.01□□□□□ -0.81
GAPVD1-204ENST00000394083 ZBTB22O15209 634 aa10.01□□□□□ -0.81
GAPVD1-204ENST00000394083 PRDM1O75626 825 aa10.01□□□□□ -0.81
GAPVD1-204ENST00000394083 IDH1O75874 414 aaKnown RBP10.01□□□□□ -0.81
GAPVD1-204ENST00000394083 PLEKHA8P1O95397 391 aa10.01□□□□□ -0.81
GAPVD1-204ENST00000394083 CAMK4Q16566 473 aa10.01□□□□□ -0.81
GAPVD1-204ENST00000394083 TTC39AQ5SRH9 613 aa10.01□□□□□ -0.81
GAPVD1-204ENST00000394083 DHX40Q8IX18 779 aaKnown RBP10.01□□□□□ -0.81
GAPVD1-204ENST00000394083 DNAJC18Q9H819 358 aa10.01□□□□□ -0.81
GAPVD1-204ENST00000394083 SH2B1Q9NRF2 756 aaPredicted RBP10.01□□□□□ -0.81
GAPVD1-204ENST00000394083 PCDHA7Q9UN72 937 aa10.01□□□□□ -0.81
GAPVD1-204ENST00000394083 LOC285556D6RIA3 1793 aa10.01□□□□□ -0.81
GAPVD1-204ENST00000394083 TRIM37O94972 964 aa10□□□□□ -0.81
GAPVD1-204ENST00000394083 MRE11P49959 708 aa10□□□□□ -0.81
GAPVD1-204ENST00000394083 COL23A1Q86Y22 540 aaPredicted RBP10□□□□□ -0.81
GAPVD1-204ENST00000394083 ANAPC4Q9UJX5 808 aa10□□□□□ -0.81
GAPVD1-204ENST00000394083 FAM205AQ6ZU69 1335 aa10□□□□□ -0.81
GAPVD1-204ENST00000394083 TOM1O60784 492 aa10□□□□□ -0.81
GAPVD1-204ENST00000394083 NOVP48745 357 aa10□□□□□ -0.81
GAPVD1-204ENST00000394083 PTPN21Q16825 1174 aa10□□□□□ -0.81
GAPVD1-204ENST00000394083 SLC4A8Q2Y0W8 1093 aa10□□□□□ -0.81
GAPVD1-204ENST00000394083 LARP1BQ659C4 914 aaKnown RBP10□□□□□ -0.81
GAPVD1-204ENST00000394083 FBXO18Q8NFZ0 1043 aa10□□□□□ -0.81
GAPVD1-204ENST00000394083 STAG1Q8WVM7 1258 aa10□□□□□ -0.81
GAPVD1-204ENST00000394083 RTFDC1Q9BY42 306 aaPredicted RBP10□□□□□ -0.81
GAPVD1-204ENST00000394083 CNNM1Q9NRU3 951 aa10□□□□□ -0.81
GAPVD1-204ENST00000394083 INTS13Q9NVM9 706 aa10□□□□□ -0.81
GAPVD1-204ENST00000394083 CCNL1Q9UK58 526 aaPredicted RBP10□□□□□ -0.81
GAPVD1-204ENST00000394083 HPSEQ9Y251 543 aa10□□□□□ -0.81
GAPVD1-204ENST00000394083 NR5A1Q13285 461 aa10□□□□□ -0.81
GAPVD1-204ENST00000394083 ZFPM1Q8IX07 1006 aa10□□□□□ -0.81
GAPVD1-204ENST00000394083 DDX4Q9NQI0 724 aaKnown RBP10□□□□□ -0.81
GAPVD1-204ENST00000394083 CHD7Q9P2D1 2997 aa10□□□□□ -0.81
GAPVD1-204ENST00000394083 WDFY3Q8IZQ1 3526 aa10□□□□□ -0.81
GAPVD1-204ENST00000394083 PTPRFP10586 1907 aa10□□□□□ -0.81
GAPVD1-204ENST00000394083 LINC00301Q8NCQ3 95 aa9.99□□□□□ -0.81
GAPVD1-204ENST00000394083 NDUFA8P51970 172 aa9.99□□□□□ -0.81
GAPVD1-204ENST00000394083 DCP1AQ9NPI6 582 aaPredicted RBP9.99□□□□□ -0.81
GAPVD1-204ENST00000394083 DACT1Q9NYF0 836 aa9.99□□□□□ -0.81
GAPVD1-204ENST00000394083 PATL2C9JE40 543 aaKnown RBP9.99□□□□□ -0.81
GAPVD1-204ENST00000394083 RRP1BQ14684 758 aaKnown RBP9.99□□□□□ -0.81
GAPVD1-204ENST00000394083 LUZP1Q86V48 1076 aa9.99□□□□□ -0.81
GAPVD1-204ENST00000394083 CLEC10AQ8IUN9 316 aa9.99□□□□□ -0.81
GAPVD1-204ENST00000394083 VPS37CA5D8V6 355 aaPredicted RBP9.99□□□□□ -0.81
GAPVD1-204ENST00000394083 KDM4AO75164 1064 aa9.99□□□□□ -0.81
GAPVD1-204ENST00000394083 U2AF2P26368 475 aaKnown RBP eCLIP9.99□□□□□ -0.811e-6■■■□□ 15.4
GAPVD1-204ENST00000394083 UBE2HP62256 183 aa9.99□□□□□ -0.81
GAPVD1-204ENST00000394083 RUFY2Q8WXA3 655 aa9.99□□□□□ -0.81
GAPVD1-204ENST00000394083 GBP4Q96PP9 640 aa9.99□□□□□ -0.81
GAPVD1-204ENST00000394083 ROBO3Q96MS0 1386 aa9.99□□□□□ -0.81
GAPVD1-204ENST00000394083 WDR90Q96KV7 1748 aa9.98□□□□□ -0.81
GAPVD1-204ENST00000394083 USP17L8P0C7I0 530 aa9.98□□□□□ -0.81
GAPVD1-204ENST00000394083 PRELPP51888 382 aa9.98□□□□□ -0.81
GAPVD1-204ENST00000394083 DPYDQ12882 1025 aa9.98□□□□□ -0.81
GAPVD1-204ENST00000394083 CLIC6Q96NY7 704 aa9.98□□□□□ -0.81
GAPVD1-204ENST00000394083 CPVLQ9H3G5 476 aa9.98□□□□□ -0.81
GAPVD1-204ENST00000394083 MUC3AQ02505 3323 aa9.98□□□□□ -0.81
GAPVD1-204ENST00000394083 KLF18A0A0U1RQI7 1052 aa9.98□□□□□ -0.81
GAPVD1-204ENST00000394083 PDE4BQ07343 736 aa9.98□□□□□ -0.81
GAPVD1-204ENST00000394083 TDRD7Q8NHU6 1098 aaKnown RBP9.98□□□□□ -0.81
GAPVD1-204ENST00000394083 DYNLL2Q96FJ2 89 aa9.98□□□□□ -0.81
GAPVD1-204ENST00000394083 BCL11BQ9C0K0 894 aaPredicted RBP9.98□□□□□ -0.81
GAPVD1-204ENST00000394083 SMC3Q9UQE7 1217 aa9.98□□□□□ -0.81
GAPVD1-204ENST00000394083 HIP1O00291 1037 aa9.98□□□□□ -0.81
GAPVD1-204ENST00000394083 APTXQ7Z2E3 356 aaKnown RBP9.98□□□□□ -0.81
GAPVD1-204ENST00000394083 CKAP2LQ8IYA6 745 aa9.98□□□□□ -0.81
GAPVD1-204ENST00000394083 CHMP4AQ9BY43 222 aa9.98□□□□□ -0.81
GAPVD1-204ENST00000394083 TICAM2Q86XR7 235 aa9.98□□□□□ -0.81
GAPVD1-204ENST00000394083 SRBD1Q8N5C6 995 aaKnown RBP9.98□□□□□ -0.81
GAPVD1-204ENST00000394083 C7orf43Q8WVR3 580 aa9.98□□□□□ -0.81
GAPVD1-204ENST00000394083 DMDP11532 3685 aa9.98□□□□□ -0.81
GAPVD1-204ENST00000394083 WDR19Q8NEZ3 1342 aa9.97□□□□□ -0.81
GAPVD1-204ENST00000394083 PRUNE2Q8WUY3 3088 aa9.97□□□□□ -0.81
GAPVD1-204ENST00000394083 KCNA3P22001 575 aa9.97□□□□□ -0.81
GAPVD1-204ENST00000394083 CEBPZQ03701 1054 aaKnown RBP9.97□□□□□ -0.81
GAPVD1-204ENST00000394083 PARP10Q53GL7 1025 aa9.97□□□□□ -0.81
GAPVD1-204ENST00000394083 POTEAQ6S8J7 498 aa9.97□□□□□ -0.81
GAPVD1-204ENST00000394083 SIAH1Q8IUQ4 282 aa9.97□□□□□ -0.81
GAPVD1-204ENST00000394083 SH3RF3Q8TEJ3 882 aaPredicted RBP9.97□□□□□ -0.81
GAPVD1-204ENST00000394083 GPATCH3Q96I76 525 aa9.97□□□□□ -0.81
GAPVD1-204ENST00000394083 CDAN1Q8IWY9 1227 aa9.97□□□□□ -0.81
GAPVD1-204ENST00000394083 STAG2Q8N3U4 1231 aa9.97□□□□□ -0.81
GAPVD1-204ENST00000394083 NASPP49321 788 aaPredicted RBP9.97□□□□□ -0.81
GAPVD1-204ENST00000394083 C4orf32Q8N8J7 132 aa9.97□□□□□ -0.81
GAPVD1-204ENST00000394083 PYCARDQ9ULZ3 195 aa9.97□□□□□ -0.81
GAPVD1-204ENST00000394083 KCNJ14Q9UNX9 436 aa9.97□□□□□ -0.81
GAPVD1-204ENST00000394083 AKAP2Q9Y2D5 859 aa9.97□□□□□ -0.81
GAPVD1-204ENST00000394083 OTOFQ9HC10 1997 aa9.96□□□□□ -0.81
GAPVD1-204ENST00000394083 FAM237AA0A1B0GTK4 181 aa9.96□□□□□ -0.81
GAPVD1-204ENST00000394083 CNTNAP5Q8WYK1 1306 aa9.96□□□□□ -0.81
GAPVD1-204ENST00000394083 CASP1P29466 404 aa9.96□□□□□ -0.82
GAPVD1-204ENST00000394083 RPS8P62241 208 aaKnown RBP9.96□□□□□ -0.82
GAPVD1-204ENST00000394083 KIAA1211Q6ZU35 1233 aa9.96□□□□□ -0.82
GAPVD1-204ENST00000394083 SH3BP5LQ7L8J4 393 aa9.96□□□□□ -0.82
GAPVD1-204ENST00000394083 POLR3DP05423 398 aaPredicted RBP9.96□□□□□ -0.82
GAPVD1-204ENST00000394083 METTL16Q86W50 562 aaKnown RBP9.96□□□□□ -0.82
GAPVD1-204ENST00000394083 USP25Q9UHP3 1055 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms