RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 MYOZ2Q9NPC6 264 aa28.86■■■□□ 2.21
LRFN4-202ENST00000393952 CNOT7Q9UIV1 285 aaKnown RBP28.86■■■□□ 2.21
LRFN4-202ENST00000393952 MYH1P12882 1939 aa28.86■■■□□ 2.21
LRFN4-202ENST00000393952 MMP14P50281 582 aa28.85■■■□□ 2.21
LRFN4-202ENST00000393952 CACNB3P54284 484 aa28.85■■■□□ 2.21
LRFN4-202ENST00000393952 CTDSPL2Q05D32 466 aa28.85■■■□□ 2.21
LRFN4-202ENST00000393952 PICALMQ13492 652 aa28.85■■■□□ 2.21
LRFN4-202ENST00000393952 KRT32Q14532 448 aa28.85■■■□□ 2.21
LRFN4-202ENST00000393952 TBC1D10CQ8IV04 446 aa28.85■■■□□ 2.21
LRFN4-202ENST00000393952 DDX4Q9NQI0 724 aaKnown RBP28.85■■■□□ 2.21
LRFN4-202ENST00000393952 SAP30BPQ9UHR5 308 aaKnown RBP28.85■■■□□ 2.21
LRFN4-202ENST00000393952 E7EWF7 191 aa28.84■■■□□ 2.21
LRFN4-202ENST00000393952 SMIM22K7EJ46 135 aa28.84■■■□□ 2.21
LRFN4-202ENST00000393952 DDNO94850 711 aaPredicted RBP28.84■■■□□ 2.21
LRFN4-202ENST00000393952 CYP2D6P10635 497 aa28.84■■■□□ 2.21
LRFN4-202ENST00000393952 PPARAQ07869 468 aa28.84■■■□□ 2.21
LRFN4-202ENST00000393952 ZBED3Q96IU2 234 aaPredicted RBP28.84■■■□□ 2.21
LRFN4-202ENST00000393952 UPF3BQ9BZI7 483 aaKnown RBP28.84■■■□□ 2.21
LRFN4-202ENST00000393952 ARPP21Q9UBL0 812 aaPredicted RBP28.84■■■□□ 2.21
LRFN4-202ENST00000393952 NFIAQ12857 509 aa28.84■■■□□ 2.21
LRFN4-202ENST00000393952 SBK1Q52WX2 424 aa28.84■■■□□ 2.21
LRFN4-202ENST00000393952 TM6SF1Q9BZW5 370 aa28.84■■■□□ 2.21
LRFN4-202ENST00000393952 CPA1P15085 419 aa28.83■■■□□ 2.21
LRFN4-202ENST00000393952 CASTP20810 708 aaKnown RBP28.83■■■□□ 2.21
LRFN4-202ENST00000393952 EVX2Q03828 476 aa28.83■■■□□ 2.21
LRFN4-202ENST00000393952 COL9A3Q14050 684 aaPredicted RBP28.83■■■□□ 2.21
LRFN4-202ENST00000393952 EGFRP00533 1210 aa28.82■■■□□ 2.2
LRFN4-202ENST00000393952 SLC4A8Q2Y0W8 1093 aa28.82■■■□□ 2.2
LRFN4-202ENST00000393952 RBM26Q5T8P6 1007 aaKnown RBP28.82■■■□□ 2.2
LRFN4-202ENST00000393952 GPRC5DQ9NZD1 345 aa28.82■■■□□ 2.2
LRFN4-202ENST00000393952 ANAPC4Q9UJX5 808 aa28.82■■■□□ 2.2
LRFN4-202ENST00000393952 SAMD7Q7Z3H4 446 aa28.81■■■□□ 2.2
LRFN4-202ENST00000393952 STK11IPQ8N1F8 1099 aa28.81■■■□□ 2.2
LRFN4-202ENST00000393952 IDI2Q9BXS1 227 aa28.81■■■□□ 2.2
LRFN4-202ENST00000393952 ZSWIM6Q9HCJ5 1215 aa28.81■■■□□ 2.2
LRFN4-202ENST00000393952 ZNF70Q9UC06 446 aaPredicted RBP28.81■■■□□ 2.2
LRFN4-202ENST00000393952 TACC3Q9Y6A5 838 aa28.81■■■□□ 2.2
LRFN4-202ENST00000393952 CLRN2A0PK11 232 aa28.8■■■□□ 2.2
LRFN4-202ENST00000393952 WNT10BO00744 389 aa28.8■■■□□ 2.2
LRFN4-202ENST00000393952 PSMA5P28066 241 aa28.8■■■□□ 2.2
LRFN4-202ENST00000393952 NEK4P51957 841 aa28.8■■■□□ 2.2
LRFN4-202ENST00000393952 NBPF9Q3BBW0 867 aa28.8■■■□□ 2.2
LRFN4-202ENST00000393952 NEK1Q96PY6 1258 aa28.8■■■□□ 2.2
LRFN4-202ENST00000393952 FAM198AQ9UFP1 575 aa28.8■■■□□ 2.2
LRFN4-202ENST00000393952 H7C1D1 291 aa28.79■■■□□ 2.2
LRFN4-202ENST00000393952 POLR3DP05423 398 aaPredicted RBP28.79■■■□□ 2.2
LRFN4-202ENST00000393952 SPDYE2Q495Y8 402 aa28.79■■■□□ 2.2
LRFN4-202ENST00000393952 TBC1D10BQ4KMP7 808 aaPredicted RBP28.79■■■□□ 2.2
LRFN4-202ENST00000393952 C12orf60Q5U649 245 aa28.79■■■□□ 2.2
LRFN4-202ENST00000393952 OSBPL5Q9H0X9 879 aaPredicted RBP28.79■■■□□ 2.2
LRFN4-202ENST00000393952 INCENPQ9NQS7 918 aa28.79■■■□□ 2.2
LRFN4-202ENST00000393952 ZC3H4Q9UPT8 1303 aaKnown RBP28.79■■■□□ 2.2
LRFN4-202ENST00000393952 AKNAD1Q5T1N1 836 aa28.79■■■□□ 2.2
LRFN4-202ENST00000393952 BLOC1S2Q6QNY1 142 aa28.79■■■□□ 2.2
LRFN4-202ENST00000393952 AMOTL1Q8IY63 956 aa28.79■■■□□ 2.2
LRFN4-202ENST00000393952 TMOD2Q9NZR1 351 aa28.79■■■□□ 2.2
LRFN4-202ENST00000393952 CYP46A1Q9Y6A2 500 aa28.79■■■□□ 2.2
LRFN4-202ENST00000393952 RUFY3Q7L099 469 aa28.78■■■□□ 2.2
LRFN4-202ENST00000393952 ZFPM1Q8IX07 1006 aa28.78■■■□□ 2.2
LRFN4-202ENST00000393952 STAG1Q8WVM7 1258 aa28.78■■■□□ 2.2
LRFN4-202ENST00000393952 NEDD4P46934 1319 aa28.78■■■□□ 2.2
LRFN4-202ENST00000393952 EPS15P42566 896 aa28.77■■■□□ 2.2
LRFN4-202ENST00000393952 PLCD1P51178 756 aa28.77■■■□□ 2.2
LRFN4-202ENST00000393952 TCP10Q12799 353 aa28.77■■■□□ 2.2
LRFN4-202ENST00000393952 KIF4BQ2VIQ3 1234 aa28.77■■■□□ 2.2
LRFN4-202ENST00000393952 MYO1BO43795 1136 aa28.76■■■□□ 2.19
LRFN4-202ENST00000393952 NPM3O75607 178 aaKnown RBP28.76■■■□□ 2.19
LRFN4-202ENST00000393952 CD2BP2O95400 341 aaKnown RBP28.76■■■□□ 2.19
LRFN4-202ENST00000393952 MFSD6Q6ZSS7 791 aa28.76■■■□□ 2.19
LRFN4-202ENST00000393952 RPS6KB1P23443 525 aa28.75■■■□□ 2.19
LRFN4-202ENST00000393952 DPY19L2Q6NUT2 758 aa28.75■■■□□ 2.19
LRFN4-202ENST00000393952 NCOA7Q8NI08 942 aa28.75■■■□□ 2.19
LRFN4-202ENST00000393952 VEZTQ9HBM0 779 aa28.75■■■□□ 2.19
LRFN4-202ENST00000393952 TCP10L2B9ZVM9 353 aa28.75■■■□□ 2.19
LRFN4-202ENST00000393952 TRDNQ13061 729 aa28.75■■■□□ 2.19
LRFN4-202ENST00000393952 NKX2-3Q8TAU0 364 aa28.75■■■□□ 2.19
LRFN4-202ENST00000393952 TRPM4Q8TD43 1214 aa28.75■■■□□ 2.19
LRFN4-202ENST00000393952 TCEANC2Q96MN5 208 aa28.75■■■□□ 2.19
LRFN4-202ENST00000393952 RNF41Q9H4P4 317 aaPredicted RBP28.75■■■□□ 2.19
LRFN4-202ENST00000393952 ROBO3Q96MS0 1386 aa28.74■■■□□ 2.19
LRFN4-202ENST00000393952 ST18O60284 1047 aa28.74■■■□□ 2.19
LRFN4-202ENST00000393952 ENTPD3O75355 529 aa28.74■■■□□ 2.19
LRFN4-202ENST00000393952 SLC3A2P08195 630 aaKnown RBP28.74■■■□□ 2.19
LRFN4-202ENST00000393952 HMGB1P09429 215 aaKnown RBP28.74■■■□□ 2.19
LRFN4-202ENST00000393952 LMOD1P29536 600 aaPredicted RBP28.74■■■□□ 2.19
LRFN4-202ENST00000393952 RALYLQ86SE5 291 aaKnown RBP28.74■■■□□ 2.19
LRFN4-202ENST00000393952 MB21D2Q8IYB1 491 aaPredicted RBP28.74■■■□□ 2.19
LRFN4-202ENST00000393952 DYNLL2Q96FJ2 89 aa28.74■■■□□ 2.19
LRFN4-202ENST00000393952 TTC14Q96N46 770 aa28.74■■■□□ 2.19
LRFN4-202ENST00000393952 B4E1Z4 1266 aa28.73■■■□□ 2.19
LRFN4-202ENST00000393952 TOMM22Q9NS69 142 aa28.73■■■□□ 2.19
LRFN4-202ENST00000393952 PDRG1Q9NUG6 133 aa28.73■■■□□ 2.19
LRFN4-202ENST00000393952 ASTN2O75129 1339 aaPredicted RBP28.73■■■□□ 2.19
LRFN4-202ENST00000393952 RRP12Q5JTH9 1297 aaKnown RBP28.72■■■□□ 2.19
LRFN4-202ENST00000393952 FKBP1CQ5VVH2 108 aa28.72■■■□□ 2.19
LRFN4-202ENST00000393952 DHX32Q7L7V1 743 aaKnown RBP28.72■■■□□ 2.19
LRFN4-202ENST00000393952 SH3BP5LQ7L8J4 393 aa28.72■■■□□ 2.19
LRFN4-202ENST00000393952 TTC6Q86TZ1 520 aa28.72■■■□□ 2.19
LRFN4-202ENST00000393952 SNX21Q969T3 373 aa28.72■■■□□ 2.19
LRFN4-202ENST00000393952 CNNM2Q9H8M5 875 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 160.2 ms