RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 LAMA3Q16787 3333 aa19.18■□□□□ 0.66
CHMP3-202ENST00000393773 CXCL11O14625 94 aa19.17■□□□□ 0.66
CHMP3-202ENST00000393773 GJB1P08034 283 aa19.17■□□□□ 0.66
CHMP3-202ENST00000393773 HOXD10P28358 340 aa19.17■□□□□ 0.66
CHMP3-202ENST00000393773 ALDH1L2Q3SY69 923 aa19.17■□□□□ 0.66
CHMP3-202ENST00000393773 SH3BP5LQ7L8J4 393 aa19.17■□□□□ 0.66
CHMP3-202ENST00000393773 NKX2-3Q8TAU0 364 aa19.17■□□□□ 0.66
CHMP3-202ENST00000393773 DENND2AQ9ULE3 1009 aa19.17■□□□□ 0.66
CHMP3-202ENST00000393773 PLXNB2O15031 1838 aa19.16■□□□□ 0.66
CHMP3-202ENST00000393773 ENTPD3O75355 529 aa19.16■□□□□ 0.66
CHMP3-202ENST00000393773 PTPRAP18433 802 aa19.16■□□□□ 0.66
CHMP3-202ENST00000393773 ADORA1P30542 326 aa19.16■□□□□ 0.66
CHMP3-202ENST00000393773 FCGRTP55899 365 aa19.16■□□□□ 0.66
CHMP3-202ENST00000393773 GNL3LQ9NVN8 582 aaKnown RBP19.16■□□□□ 0.66
CHMP3-202ENST00000393773 GABRQQ9UN88 632 aa19.16■□□□□ 0.66
CHMP3-202ENST00000393773 UBTFL1P0CB47 393 aaPredicted RBP19.15■□□□□ 0.66
CHMP3-202ENST00000393773 MAP3K10Q02779 954 aa19.15■□□□□ 0.66
CHMP3-202ENST00000393773 SLFN5Q08AF3 891 aa19.15■□□□□ 0.66
CHMP3-202ENST00000393773 SLAIN1Q8ND83 568 aa19.15■□□□□ 0.66
CHMP3-202ENST00000393773 PRO3102Q9H379 93 aa19.15■□□□□ 0.66
CHMP3-202ENST00000393773 CEP126Q9P2H0 1117 aa19.15■□□□□ 0.66
CHMP3-202ENST00000393773 AFG3L2Q9Y4W6 797 aa19.15■□□□□ 0.66
CHMP3-202ENST00000393773 PDS5AQ29RF7 1337 aaKnown RBP19.15■□□□□ 0.66
CHMP3-202ENST00000393773 SLURP2P0DP57 97 aa19.14■□□□□ 0.65
CHMP3-202ENST00000393773 IL15P40933 162 aaPredicted RBP19.14■□□□□ 0.65
CHMP3-202ENST00000393773 RASGRF1Q13972 1273 aa19.14■□□□□ 0.65
CHMP3-202ENST00000393773 RNF208Q9H0X6 261 aa19.14■□□□□ 0.65
CHMP3-202ENST00000393773 DDX4Q9NQI0 724 aaKnown RBP19.14■□□□□ 0.65
CHMP3-202ENST00000393773 SMC4Q9NTJ3 1288 aa19.14■□□□□ 0.65
CHMP3-202ENST00000393773 RBM27Q9P2N5 1060 aaKnown RBP19.14■□□□□ 0.65
CHMP3-202ENST00000393773 PA2G4Q9UQ80 394 aaKnown RBP19.14■□□□□ 0.65
CHMP3-202ENST00000393773 SLC45A1Q9Y2W3 748 aa19.14■□□□□ 0.65
CHMP3-202ENST00000393773 ZHX2Q9Y6X8 837 aa19.14■□□□□ 0.65
CHMP3-202ENST00000393773 ZNF316A6NFI3 1004 aaPredicted RBP19.13■□□□□ 0.65
CHMP3-202ENST00000393773 DDTLA6NHG4 134 aaPredicted RBP19.13■□□□□ 0.65
CHMP3-202ENST00000393773 UBXN2AP68543 259 aa19.13■□□□□ 0.65
CHMP3-202ENST00000393773 CCDC102BQ68D86 513 aa19.13■□□□□ 0.65
CHMP3-202ENST00000393773 FASTKD5Q7L8L6 764 aaKnown RBP19.13■□□□□ 0.65
CHMP3-202ENST00000393773 DPF3Q92784 378 aa19.13■□□□□ 0.65
CHMP3-202ENST00000393773 UNC93B1Q9H1C4 597 aa19.13■□□□□ 0.65
CHMP3-202ENST00000393773 PICK1Q9NRD5 415 aa19.13■□□□□ 0.65
CHMP3-202ENST00000393773 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.13■□□□□ 0.65
CHMP3-202ENST00000393773 LRRFIP2Q9Y608 721 aaKnown RBP19.13■□□□□ 0.65
CHMP3-202ENST00000393773 COL2A1P02458 1487 aaPredicted RBP19.13■□□□□ 0.65
CHMP3-202ENST00000393773 COL6A3P12111 3177 aa19.13■□□□□ 0.65
CHMP3-202ENST00000393773 DDX60LQ5H9U9 1706 aaKnown RBP19.12■□□□□ 0.65
CHMP3-202ENST00000393773 FARP2O94887 1054 aaPredicted RBP19.12■□□□□ 0.65
CHMP3-202ENST00000393773 GADL1Q6ZQY3 521 aa19.12■□□□□ 0.65
CHMP3-202ENST00000393773 DZIP1Q86YF9 867 aaKnown RBP19.12■□□□□ 0.65
CHMP3-202ENST00000393773 ZGPATQ8N5A5 531 aaKnown RBP19.12■□□□□ 0.65
CHMP3-202ENST00000393773 U2AF1L4Q8WU68 220 aaKnown RBP19.12■□□□□ 0.65
CHMP3-202ENST00000393773 HTATIP2Q9BUP3 242 aa19.12■□□□□ 0.65
CHMP3-202ENST00000393773 COPRSQ9NQ92 184 aa19.12■□□□□ 0.65
CHMP3-202ENST00000393773 MYO5AQ9Y4I1 1855 aaKnown RBP19.11■□□□□ 0.65
CHMP3-202ENST00000393773 MROH7-TTC4A0A0A0MT08 1334 aa19.11■□□□□ 0.65
CHMP3-202ENST00000393773 BTDP43251 543 aa19.11■□□□□ 0.65
CHMP3-202ENST00000393773 FAM163AQ96GL9 167 aaPredicted RBP19.11■□□□□ 0.65
CHMP3-202ENST00000393773 BIN2Q9UBW5 565 aaPredicted RBP19.11■□□□□ 0.65
CHMP3-202ENST00000393773 ADCY3O60266 1144 aa19.1■□□□□ 0.65
CHMP3-202ENST00000393773 INHAP05111 366 aa19.1■□□□□ 0.65
CHMP3-202ENST00000393773 ELNP15502 786 aa19.1■□□□□ 0.65
CHMP3-202ENST00000393773 FLT3LGP49771 235 aa19.1■□□□□ 0.65
CHMP3-202ENST00000393773 CCDC84Q86UT8 332 aaPredicted RBP19.1■□□□□ 0.65
CHMP3-202ENST00000393773 ZNF384Q8TF68 577 aa19.1■□□□□ 0.65
CHMP3-202ENST00000393773 CDCA7LQ96GN5 454 aa19.1■□□□□ 0.65
CHMP3-202ENST00000393773 CTNND1O60716 968 aaKnown RBP19.09■□□□□ 0.65
CHMP3-202ENST00000393773 PICALMQ13492 652 aa19.09■□□□□ 0.65
CHMP3-202ENST00000393773 IRF5Q13568 498 aa19.09■□□□□ 0.65
CHMP3-202ENST00000393773 ZSCAN29Q8IWY8 852 aaPredicted RBP19.09■□□□□ 0.65
CHMP3-202ENST00000393773 PXYLP1Q8TE99 480 aa19.09■□□□□ 0.65
CHMP3-202ENST00000393773 MEIS3Q99687 375 aa19.09■□□□□ 0.65
CHMP3-202ENST00000393773 AGTPBP1Q9UPW5 1226 aa19.09■□□□□ 0.65
CHMP3-202ENST00000393773 FRMPD3Q5JV73 1810 aa19.09■□□□□ 0.65
CHMP3-202ENST00000393773 TRIM75PA6NK02 468 aa19.08■□□□□ 0.64
CHMP3-202ENST00000393773 TNPO2O14787 897 aaKnown RBP19.08■□□□□ 0.64
CHMP3-202ENST00000393773 ZBTB7BO15156 539 aaPredicted RBP19.08■□□□□ 0.64
CHMP3-202ENST00000393773 SGPL1O95470 568 aa19.08■□□□□ 0.64
CHMP3-202ENST00000393773 RHBDL3P58872 404 aa19.08■□□□□ 0.64
CHMP3-202ENST00000393773 TRMT2AQ8IZ69 625 aaKnown RBP19.08■□□□□ 0.64
CHMP3-202ENST00000393773 SMCR8Q8TEV9 937 aaPredicted RBP19.08■□□□□ 0.64
CHMP3-202ENST00000393773 PAK6Q9NQU5 681 aaPredicted RBP19.08■□□□□ 0.64
CHMP3-202ENST00000393773 ABCF2Q9UG63 623 aa19.08■□□□□ 0.64
CHMP3-202ENST00000393773 TIMM10P62072 90 aa19.07■□□□□ 0.64
CHMP3-202ENST00000393773 MECOMQ03112 1051 aa19.07■□□□□ 0.64
CHMP3-202ENST00000393773 TREML2Q5T2D2 321 aa19.07■□□□□ 0.64
CHMP3-202ENST00000393773 SLF2Q8IX21 1173 aa19.07■□□□□ 0.64
CHMP3-202ENST00000393773 NOB1Q9ULX3 412 aaKnown RBP19.07■□□□□ 0.64
CHMP3-202ENST00000393773 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.07■□□□□ 0.64
CHMP3-202ENST00000393773 GPR75-ASB3A0A0A6YYF3 556 aa19.06■□□□□ 0.64
CHMP3-202ENST00000393773 A0A1B0GUL7 405 aa19.06■□□□□ 0.64
CHMP3-202ENST00000393773 FAM196BA6NMK8 535 aa19.06■□□□□ 0.64
CHMP3-202ENST00000393773 NPM3O75607 178 aaKnown RBP19.06■□□□□ 0.64
CHMP3-202ENST00000393773 FAM110CQ1W6H9 321 aa19.06■□□□□ 0.64
CHMP3-202ENST00000393773 ANKRD13CQ8N6S4 541 aa19.06■□□□□ 0.64
CHMP3-202ENST00000393773 API5Q9BZZ5 524 aaKnown RBP19.06■□□□□ 0.64
CHMP3-202ENST00000393773 TBC1D12O60347 775 aa19.05■□□□□ 0.64
CHMP3-202ENST00000393773 SPTY2D1Q68D10 685 aaPredicted RBP19.05■□□□□ 0.64
CHMP3-202ENST00000393773 PI16Q6UXB8 463 aa19.05■□□□□ 0.64
CHMP3-202ENST00000393773 PROCA1Q8NCQ7 364 aaPredicted RBP19.05■□□□□ 0.64
CHMP3-202ENST00000393773 XAGE2Q96GT9 111 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms