RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 EID1Q9Y6B2 187 aa18.68■□□□□ 0.58
PHTF1-205ENST00000393357 RNF113AO15541 343 aaKnown RBP18.67■□□□□ 0.58
PHTF1-205ENST00000393357 KCNA6P17658 529 aa18.67■□□□□ 0.58
PHTF1-205ENST00000393357 SLC39A14Q15043 492 aa18.67■□□□□ 0.58
PHTF1-205ENST00000393357 HOOK1Q9UJC3 728 aaKnown RBP18.67■□□□□ 0.58
PHTF1-205ENST00000393357 CUTAO60888 179 aa18.67■□□□□ 0.58
PHTF1-205ENST00000393357 CASP8Q14790 479 aa18.67■□□□□ 0.58
PHTF1-205ENST00000393357 HDXQ7Z353 690 aa18.67■□□□□ 0.58
PHTF1-205ENST00000393357 HPS5Q9UPZ3 1129 aa18.67■□□□□ 0.58
PHTF1-205ENST00000393357 KIFC2Q96AC6 838 aa18.66■□□□□ 0.58
PHTF1-205ENST00000393357 ZNF274Q96GC6 653 aaPredicted RBP18.66■□□□□ 0.58
PHTF1-205ENST00000393357 MAN1B1Q9UKM7 699 aa18.66■□□□□ 0.58
PHTF1-205ENST00000393357 USP31Q70CQ4 1352 aa18.66■□□□□ 0.58
PHTF1-205ENST00000393357 PDIA6Q15084 440 aa18.66■□□□□ 0.58
PHTF1-205ENST00000393357 SRGAP1Q7Z6B7 1085 aa18.66■□□□□ 0.58
PHTF1-205ENST00000393357 NUP88Q99567 741 aaPredicted RBP18.66■□□□□ 0.58
PHTF1-205ENST00000393357 XRN1Q8IZH2 1706 aaKnown RBP18.66■□□□□ 0.58
PHTF1-205ENST00000393357 AKR1B15C9JRZ8 316 aaPredicted RBP18.66■□□□□ 0.58
PHTF1-205ENST00000393357 ERCC3P19447 782 aa18.66■□□□□ 0.58
PHTF1-205ENST00000393357 GUCY1A2P33402 732 aa18.66■□□□□ 0.58
PHTF1-205ENST00000393357 ZAP70P43403 619 aa18.66■□□□□ 0.58
PHTF1-205ENST00000393357 ALDH8A1Q9H2A2 487 aaPredicted RBP18.66■□□□□ 0.58
PHTF1-205ENST00000393357 BLZF1Q9H2G9 400 aa18.66■□□□□ 0.58
PHTF1-205ENST00000393357 SRCAPQ6ZRS2 3230 aa18.66■□□□□ 0.58
PHTF1-205ENST00000393357 DIP2BQ9P265 1576 aa18.66■□□□□ 0.58
PHTF1-205ENST00000393357 LRRIQ3A6PVS8 624 aaPredicted RBP18.65■□□□□ 0.58
PHTF1-205ENST00000393357 ZNF790Q6PG37 636 aa18.65■□□□□ 0.58
PHTF1-205ENST00000393357 RSRC2Q7L4I2 434 aaKnown RBP18.65■□□□□ 0.58
PHTF1-205ENST00000393357 EXOC4Q96A65 974 aa18.65■□□□□ 0.58
PHTF1-205ENST00000393357 IARSP41252 1262 aaKnown RBP18.65■□□□□ 0.58
PHTF1-205ENST00000393357 ANTXR2P58335 489 aa18.65■□□□□ 0.58
PHTF1-205ENST00000393357 NOM1Q5C9Z4 860 aaKnown RBP18.65■□□□□ 0.58
PHTF1-205ENST00000393357 ANKRD24Q8TF21 1146 aa18.65■□□□□ 0.58
PHTF1-205ENST00000393357 METTL22Q9BUU2 404 aaPredicted RBP18.65■□□□□ 0.58
PHTF1-205ENST00000393357 JRKLQ9Y4A0 524 aa18.65■□□□□ 0.58
PHTF1-205ENST00000393357 CTAGE15A4D2H0 777 aa18.64■□□□□ 0.58
PHTF1-205ENST00000393357 IKBKBO14920 756 aa18.64■□□□□ 0.58
PHTF1-205ENST00000393357 ERLIN1O75477 346 aa18.64■□□□□ 0.58
PHTF1-205ENST00000393357 EIF3JO75822 258 aaKnown RBP18.64■□□□□ 0.58
PHTF1-205ENST00000393357 CTAGE8P0CG41 777 aa18.64■□□□□ 0.58
PHTF1-205ENST00000393357 POSTNQ15063 836 aa18.64■□□□□ 0.58
PHTF1-205ENST00000393357 BEND6Q5SZJ8 279 aaPredicted RBP18.64■□□□□ 0.58
PHTF1-205ENST00000393357 CTAGE6Q86UF2 777 aa18.64■□□□□ 0.58
PHTF1-205ENST00000393357 CTAGE4Q8IX94 777 aa18.64■□□□□ 0.58
PHTF1-205ENST00000393357 JMYQ8N9B5 988 aa18.64■□□□□ 0.58
PHTF1-205ENST00000393357 NCOA7Q8NI08 942 aa18.64■□□□□ 0.58
PHTF1-205ENST00000393357 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.64■□□□□ 0.58
PHTF1-205ENST00000393357 C19orf44Q9H6X5 657 aa18.64■□□□□ 0.58
PHTF1-205ENST00000393357 AGLP35573 1532 aa18.64■□□□□ 0.57
PHTF1-205ENST00000393357 CTAGE9A4FU28 777 aa18.64■□□□□ 0.57
PHTF1-205ENST00000393357 CCDC151A5D8V7 595 aa18.64■□□□□ 0.57
PHTF1-205ENST00000393357 ZMYM1Q5SVZ6 1142 aa18.64■□□□□ 0.57
PHTF1-205ENST00000393357 TUBGCP6Q96RT7 1819 aa18.64■□□□□ 0.57
PHTF1-205ENST00000393357 GOLGA8AA7E2F4 631 aa18.64■□□□□ 0.57
PHTF1-205ENST00000393357 CAGE1Q8TC20 777 aa18.64■□□□□ 0.57
PHTF1-205ENST00000393357 COPRSQ9NQ92 184 aa18.64■□□□□ 0.57
PHTF1-205ENST00000393357 SAMM50Q9Y512 469 aa18.64■□□□□ 0.57
PHTF1-205ENST00000393357 FAM205CA6NFA0 338 aa18.63■□□□□ 0.57
PHTF1-205ENST00000393357 TTLL7Q6ZT98 887 aa18.63■□□□□ 0.57
PHTF1-205ENST00000393357 IP6K1Q92551 441 aa18.63■□□□□ 0.57
PHTF1-205ENST00000393357 SALL1Q9NSC2 1324 aa18.63■□□□□ 0.57
PHTF1-205ENST00000393357 STX10O60499 249 aa18.63■□□□□ 0.57
PHTF1-205ENST00000393357 SF3A3Q12874 501 aaKnown RBP eCLIP18.63■□□□□ 0.57
PHTF1-205ENST00000393357 CYB5R4Q7L1T6 521 aa18.63■□□□□ 0.57
PHTF1-205ENST00000393357 BRAPQ7Z569 592 aa18.63■□□□□ 0.57
PHTF1-205ENST00000393357 AXIN2Q9Y2T1 843 aa18.63■□□□□ 0.57
PHTF1-205ENST00000393357 RNF40O75150 1001 aa18.62■□□□□ 0.57
PHTF1-205ENST00000393357 RFX5P48382 616 aaPredicted RBP18.62■□□□□ 0.57
PHTF1-205ENST00000393357 MUM1L1Q5H9M0 696 aa18.62■□□□□ 0.57
PHTF1-205ENST00000393357 CABP5Q9NP86 173 aa18.62■□□□□ 0.57
PHTF1-205ENST00000393357 PCDHB6Q9Y5E3 794 aa18.62■□□□□ 0.57
PHTF1-205ENST00000393357 GPAA1O43292 621 aa18.62■□□□□ 0.57
PHTF1-205ENST00000393357 CCT5P48643 541 aa18.62■□□□□ 0.57
PHTF1-205ENST00000393357 CTDSPL2Q05D32 466 aa18.62■□□□□ 0.57
PHTF1-205ENST00000393357 EPSTI1Q96J88 318 aa18.62■□□□□ 0.57
PHTF1-205ENST00000393357 FAM107BQ9H098 131 aa18.62■□□□□ 0.57
PHTF1-205ENST00000393357 CEP126Q9P2H0 1117 aa18.62■□□□□ 0.57
PHTF1-205ENST00000393357 SNAP23O00161 211 aa18.62■□□□□ 0.57
PHTF1-205ENST00000393357 FXR1P51114 621 aaKnown RBP eCLIP18.62■□□□□ 0.57
PHTF1-205ENST00000393357 HELBQ8NG08 1087 aaPredicted RBP18.62■□□□□ 0.57
PHTF1-205ENST00000393357 SMARCC1Q92922 1105 aaPredicted RBP18.62■□□□□ 0.57
PHTF1-205ENST00000393357 DSCC1Q9BVC3 393 aa18.62■□□□□ 0.57
PHTF1-205ENST00000393357 ADGRL3Q9HAR2 1447 aa18.62■□□□□ 0.57
PHTF1-205ENST00000393357 TAB2Q9NYJ8 693 aa18.62■□□□□ 0.57
PHTF1-205ENST00000393357 CDC23Q9UJX2 597 aa18.62■□□□□ 0.57
PHTF1-205ENST00000393357 ADGRG1Q9Y653 693 aa18.62■□□□□ 0.57
PHTF1-205ENST00000393357 N4BP3O15049 544 aa18.61■□□□□ 0.57
PHTF1-205ENST00000393357 NOP2P46087 812 aaKnown RBP18.61■□□□□ 0.57
PHTF1-205ENST00000393357 CPLX2Q6PUV4 134 aaKnown RBP18.61■□□□□ 0.57
PHTF1-205ENST00000393357 LRRC31Q6UY01 552 aa18.61■□□□□ 0.57
PHTF1-205ENST00000393357 MTMR7Q9Y216 660 aa18.61■□□□□ 0.57
PHTF1-205ENST00000393357 A0A0G2JS52 829 aa18.61■□□□□ 0.57
PHTF1-205ENST00000393357 ICE2Q659A1 982 aa18.61■□□□□ 0.57
PHTF1-205ENST00000393357 ATL3Q6DD88 541 aa18.61■□□□□ 0.57
PHTF1-205ENST00000393357 SYNE4Q8N205 404 aa18.61■□□□□ 0.57
PHTF1-205ENST00000393357 PLIN2Q99541 437 aa18.61■□□□□ 0.57
PHTF1-205ENST00000393357 BPIFA3Q9BQP9 254 aa18.61■□□□□ 0.57
PHTF1-205ENST00000393357 PHF8Q9UPP1 1060 aa18.61■□□□□ 0.57
PHTF1-205ENST00000393357 TMEM67Q5HYA8 995 aa18.61■□□□□ 0.57
PHTF1-205ENST00000393357 CTR9Q6PD62 1173 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms