RNA–Protein interactions for RNA: ENST00000393330.6

TSPAN8-202, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-202ENST00000393330 DDR1Q08345 913 aa6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 ITPK1Q13572 414 aa6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 ARSJQ5FYB0 599 aaPredicted RBP6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 EFHC2Q5JST6 749 aa6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 FBXO46Q6PJ61 603 aaPredicted RBP6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 C2CD5Q86YS7 1000 aa6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 TSEN2Q8NCE0 465 aaKnown RBP6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 IP6K1Q92551 441 aa6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 PBXIP1Q96AQ6 731 aa6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 ZNF232Q9UNY5 417 aa6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 USTQ9Y2C2 406 aa6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 DOT1LQ8TEK3 1739 aa6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 TOGARAM1Q9Y4F4 1720 aa6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 PCDH11XQ9BZA7 1347 aa6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 PCDH11YQ9BZA8 1340 aa6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 POLRMTO00411 1230 aaKnown RBP6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 C21orf2O43822 256 aa6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 TM4SF1P30408 202 aa6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 PLA2G5P39877 138 aa6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 CRTC2Q53ET0 693 aaPredicted RBP6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 BICDL1Q6ZP65 573 aa6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 ZNF295-AS1Q8N0V1 137 aa6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 SIX5Q8N196 739 aa6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 RAPGEF4Q8WZA2 1011 aa6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 FAM122AQ96E09 287 aa6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 RNF186Q9NXI6 227 aa6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 IVNS1ABPQ9Y6Y0 642 aa6.76□□□□□ -1.33
TSPAN8-202ENST00000393330 NFAT5O94916 1531 aa6.75□□□□□ -1.33
TSPAN8-202ENST00000393330 SCN4AP35499 1836 aa6.75□□□□□ -1.33
TSPAN8-202ENST00000393330 MAP3K19Q56UN5 1328 aa6.75□□□□□ -1.33
TSPAN8-202ENST00000393330 UNCXA6NJT0 531 aa6.75□□□□□ -1.33
TSPAN8-202ENST00000393330 LGR5O75473 907 aa6.75□□□□□ -1.33
TSPAN8-202ENST00000393330 DKK1O94907 266 aa6.75□□□□□ -1.33
TSPAN8-202ENST00000393330 CELF2O95319 508 aaKnown RBP6.75□□□□□ -1.33
TSPAN8-202ENST00000393330 TATP17735 454 aaPredicted RBP6.75□□□□□ -1.33
TSPAN8-202ENST00000393330 CANXP27824 592 aaKnown RBP6.75□□□□□ -1.33
TSPAN8-202ENST00000393330 NOS2P35228 1153 aa6.75□□□□□ -1.33
TSPAN8-202ENST00000393330 TXLNAP40222 546 aa6.75□□□□□ -1.33
TSPAN8-202ENST00000393330 EPHA4P54764 986 aa6.75□□□□□ -1.33
TSPAN8-202ENST00000393330 SEC13P55735 322 aa6.75□□□□□ -1.33
TSPAN8-202ENST00000393330 FOXK2Q01167 660 aa6.75□□□□□ -1.33
TSPAN8-202ENST00000393330 TMED8Q6PL24 325 aaPredicted RBP6.75□□□□□ -1.33
TSPAN8-202ENST00000393330 SND1Q7KZF4 910 aaKnown RBP eCLIP6.75□□□□□ -1.33
TSPAN8-202ENST00000393330 ZDHHC1Q8WTX9 485 aa6.75□□□□□ -1.33
TSPAN8-202ENST00000393330 L3MBTL2Q969R5 705 aa6.75□□□□□ -1.33
TSPAN8-202ENST00000393330 LTV1Q96GA3 475 aaPredicted RBP6.75□□□□□ -1.33
TSPAN8-202ENST00000393330 HINFPQ9BQA5 517 aa6.75□□□□□ -1.33
TSPAN8-202ENST00000393330 PLCD4Q9BRC7 762 aa6.75□□□□□ -1.33
TSPAN8-202ENST00000393330 TSPAN10Q9H1Z9 355 aaPredicted RBP6.75□□□□□ -1.33
TSPAN8-202ENST00000393330 MBIPQ9NS73 344 aa6.75□□□□□ -1.33
TSPAN8-202ENST00000393330 TAF1LQ8IZX4 1826 aa6.75□□□□□ -1.33
TSPAN8-202ENST00000393330 TIAM2Q8IVF5 1701 aa6.74□□□□□ -1.33
TSPAN8-202ENST00000393330 RNF123Q5XPI4 1314 aa6.74□□□□□ -1.33
TSPAN8-202ENST00000393330 CNTNAP4Q9C0A0 1308 aa6.74□□□□□ -1.33
TSPAN8-202ENST00000393330 SZT2Q5T011 3432 aa6.74□□□□□ -1.33
TSPAN8-202ENST00000393330 MX2P20592 715 aa6.74□□□□□ -1.33
TSPAN8-202ENST00000393330 ATP4AP20648 1035 aa6.74□□□□□ -1.33
TSPAN8-202ENST00000393330 SRSF11Q05519 484 aaKnown RBP6.74□□□□□ -1.33
TSPAN8-202ENST00000393330 DPYDQ12882 1025 aa6.74□□□□□ -1.33
TSPAN8-202ENST00000393330 PTK7Q13308 1070 aa6.74□□□□□ -1.33
TSPAN8-202ENST00000393330 LBRQ14739 615 aaKnown RBP6.74□□□□□ -1.33
TSPAN8-202ENST00000393330 TEAD4Q15561 434 aa6.74□□□□□ -1.33
TSPAN8-202ENST00000393330 USP50Q70EL3 339 aaPredicted RBP6.74□□□□□ -1.33
TSPAN8-202ENST00000393330 GPC2Q8N158 579 aa6.74□□□□□ -1.33
TSPAN8-202ENST00000393330 SVOPQ8N4V2 548 aa6.74□□□□□ -1.33
TSPAN8-202ENST00000393330 C1orf216Q8TAB5 229 aa6.74□□□□□ -1.33
TSPAN8-202ENST00000393330 WHAMMQ8TF30 809 aa6.74□□□□□ -1.33
TSPAN8-202ENST00000393330 CRISPLD1Q9H336 500 aa6.74□□□□□ -1.33
TSPAN8-202ENST00000393330 RGPD5Q99666 1765 aa6.74□□□□□ -1.33
TSPAN8-202ENST00000393330 USP31Q70CQ4 1352 aa6.74□□□□□ -1.33
TSPAN8-202ENST00000393330 A0A1W2PNR3 127 aa6.73□□□□□ -1.33
TSPAN8-202ENST00000393330 SERTM1A2A2V5 107 aa6.73□□□□□ -1.33
TSPAN8-202ENST00000393330 USP17L15C9J2P7 530 aa6.73□□□□□ -1.33
TSPAN8-202ENST00000393330 USP17L10C9JJH3 530 aa6.73□□□□□ -1.33
TSPAN8-202ENST00000393330 USP17L13C9JLJ4 530 aa6.73□□□□□ -1.33
TSPAN8-202ENST00000393330 USP17L12C9JPN9 530 aa6.73□□□□□ -1.33
TSPAN8-202ENST00000393330 USP17L11C9JVI0 530 aa6.73□□□□□ -1.33
TSPAN8-202ENST00000393330 USP17L21D6R901 530 aa6.73□□□□□ -1.33
TSPAN8-202ENST00000393330 USP17L18D6R9N7 530 aa6.73□□□□□ -1.33
TSPAN8-202ENST00000393330 USP17L22D6RA61 530 aa6.73□□□□□ -1.33
TSPAN8-202ENST00000393330 USP17L17D6RBQ6 530 aa6.73□□□□□ -1.33
TSPAN8-202ENST00000393330 USP17L19D6RCP7 530 aa6.73□□□□□ -1.33
TSPAN8-202ENST00000393330 USP17L20D6RJB6 530 aa6.73□□□□□ -1.33
TSPAN8-202ENST00000393330 SLURP2P0DP57 97 aa6.73□□□□□ -1.33
TSPAN8-202ENST00000393330 FMR1Q06787 632 aaKnown RBP eCLIP6.73□□□□□ -1.33
TSPAN8-202ENST00000393330 USP17L24Q0WX57 530 aa6.73□□□□□ -1.33
TSPAN8-202ENST00000393330 CNGB1Q14028 1251 aaPredicted RBP6.73□□□□□ -1.33
TSPAN8-202ENST00000393330 ZNF622Q969S3 477 aaKnown RBP eCLIP6.73□□□□□ -1.33
TSPAN8-202ENST00000393330 CFHR5Q9BXR6 569 aa6.73□□□□□ -1.33
TSPAN8-202ENST00000393330 TMOD3Q9NYL9 352 aa6.73□□□□□ -1.33
TSPAN8-202ENST00000393330 PHF24Q9UPV7 400 aa6.73□□□□□ -1.33
TSPAN8-202ENST00000393330 GJA3Q9Y6H8 435 aa6.73□□□□□ -1.33
TSPAN8-202ENST00000393330 CD163L1Q9NR16 1453 aa6.73□□□□□ -1.33
TSPAN8-202ENST00000393330 USP42Q9H9J4 1324 aaKnown RBP6.73□□□□□ -1.33
TSPAN8-202ENST00000393330 H0YGN5 161 aa6.72□□□□□ -1.33
TSPAN8-202ENST00000393330 M0R2N6 131 aa6.72□□□□□ -1.33
TSPAN8-202ENST00000393330 TRAF5O00463 557 aa6.72□□□□□ -1.33
TSPAN8-202ENST00000393330 PTMAP06454 111 aaKnown RBP6.72□□□□□ -1.33
TSPAN8-202ENST00000393330 UBAP2LQ14157 1087 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms