RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 PRXQ9BXM0 1461 aa18.04■□□□□ 0.48
SHANK1-204ENST00000391814 TOP2BQ02880 1626 aa18.04■□□□□ 0.48
SHANK1-204ENST00000391814 PFDN1O60925 122 aa18.04■□□□□ 0.48
SHANK1-204ENST00000391814 COG7P83436 770 aa18.04■□□□□ 0.48
SHANK1-204ENST00000391814 IQUBQ8NA54 791 aa18.04■□□□□ 0.48
SHANK1-204ENST00000391814 TMOD3Q9NYL9 352 aa18.04■□□□□ 0.48
SHANK1-204ENST00000391814 PARD3Q8TEW0 1356 aa18.03■□□□□ 0.48
SHANK1-204ENST00000391814 FBLN1P23142 703 aa18.03■□□□□ 0.48
SHANK1-204ENST00000391814 CTNNA1P35221 906 aaKnown RBP18.03■□□□□ 0.48
SHANK1-204ENST00000391814 E2F5Q15329 346 aa18.03■□□□□ 0.48
SHANK1-204ENST00000391814 ZMYM4Q5VZL5 1548 aa18.03■□□□□ 0.48
SHANK1-204ENST00000391814 PAK1Q13153 545 aa18.03■□□□□ 0.48
SHANK1-204ENST00000391814 PNOCQ13519 176 aa18.03■□□□□ 0.48
SHANK1-204ENST00000391814 CLUL1Q15846 466 aa18.03■□□□□ 0.48
SHANK1-204ENST00000391814 CFAP221Q4G0U5 840 aa18.03■□□□□ 0.48
SHANK1-204ENST00000391814 EFCAB13Q8IY85 973 aa18.03■□□□□ 0.48
SHANK1-204ENST00000391814 PPP2R2CQ9Y2T4 447 aa18.03■□□□□ 0.48
SHANK1-204ENST00000391814 RBBP5Q15291 538 aaKnown RBP18.03■□□□□ 0.48
SHANK1-204ENST00000391814 SH2D4BQ5SQS7 431 aa18.03■□□□□ 0.48
SHANK1-204ENST00000391814 SPOPO43791 374 aa18.03■□□□□ 0.48
SHANK1-204ENST00000391814 E2F4Q16254 413 aa18.03■□□□□ 0.48
SHANK1-204ENST00000391814 AMOTQ4VCS5 1084 aa18.03■□□□□ 0.48
SHANK1-204ENST00000391814 TRMT44Q8IYL2 757 aaKnown RBP18.03■□□□□ 0.48
SHANK1-204ENST00000391814 STAG1Q8WVM7 1258 aa18.03■□□□□ 0.48
SHANK1-204ENST00000391814 ABCC5O15440 1437 aa18.03■□□□□ 0.48
SHANK1-204ENST00000391814 RNF113AO15541 343 aaKnown RBP18.03■□□□□ 0.48
SHANK1-204ENST00000391814 PPP2R5AQ15172 486 aa18.03■□□□□ 0.48
SHANK1-204ENST00000391814 JPH2Q9BR39 696 aaPredicted RBP18.03■□□□□ 0.48
SHANK1-204ENST00000391814 MAK16Q9BXY0 300 aaKnown RBP18.03■□□□□ 0.48
SHANK1-204ENST00000391814 CRNKL1Q9BZJ0 848 aaKnown RBP18.03■□□□□ 0.48
SHANK1-204ENST00000391814 ODF2LQ9ULJ1 636 aa18.03■□□□□ 0.48
SHANK1-204ENST00000391814 CYP7A1P22680 504 aa18.02■□□□□ 0.48
SHANK1-204ENST00000391814 KRT71Q3SY84 523 aa18.02■□□□□ 0.48
SHANK1-204ENST00000391814 PPP1R13BQ96KQ4 1090 aa18.02■□□□□ 0.48
SHANK1-204ENST00000391814 BAG2O95816 211 aa18.02■□□□□ 0.48
SHANK1-204ENST00000391814 HINFPQ9BQA5 517 aa18.02■□□□□ 0.48
SHANK1-204ENST00000391814 STX8Q9UNK0 236 aa18.02■□□□□ 0.48
SHANK1-204ENST00000391814 LRRD1A4D1F6 860 aa18.02■□□□□ 0.47
SHANK1-204ENST00000391814 PDE4DQ08499 809 aa18.02■□□□□ 0.47
SHANK1-204ENST00000391814 KRT5P13647 590 aa18.02■□□□□ 0.47
SHANK1-204ENST00000391814 N4BP2L2Q92802 583 aaPredicted RBP18.02■□□□□ 0.47
SHANK1-204ENST00000391814 DDX41Q9UJV9 622 aaKnown RBP18.02■□□□□ 0.47
SHANK1-204ENST00000391814 SAR1BQ9Y6B6 198 aa18.02■□□□□ 0.47
SHANK1-204ENST00000391814 FAM170AA1A519 330 aa18.01■□□□□ 0.47
SHANK1-204ENST00000391814 ZKSCAN3Q9BRR0 538 aa18.01■□□□□ 0.47
SHANK1-204ENST00000391814 AGTPBP1Q9UPW5 1226 aa18.01■□□□□ 0.47
SHANK1-204ENST00000391814 TNFAIP3P21580 790 aa18.01■□□□□ 0.47
SHANK1-204ENST00000391814 TSPYL6Q8N831 410 aa18.01■□□□□ 0.47
SHANK1-204ENST00000391814 HIP1RO75146 1068 aa18.01■□□□□ 0.47
SHANK1-204ENST00000391814 GMNNO75496 209 aa18.01■□□□□ 0.47
SHANK1-204ENST00000391814 EFCC1Q9HA90 598 aa18.01■□□□□ 0.47
SHANK1-204ENST00000391814 ADGRF5Q8IZF2 1346 aa18.01■□□□□ 0.47
SHANK1-204ENST00000391814 KRT79Q5XKE5 535 aa18.01■□□□□ 0.47
SHANK1-204ENST00000391814 NCOA5Q9HCD5 579 aaKnown RBP18.01■□□□□ 0.47
SHANK1-204ENST00000391814 UBL4BQ8N7F7 174 aa18.01■□□□□ 0.47
SHANK1-204ENST00000391814 CCDC61Q9Y6R9 512 aa18.01■□□□□ 0.47
SHANK1-204ENST00000391814 MRFAP1L1Q96HT8 127 aa18■□□□□ 0.47
SHANK1-204ENST00000391814 BICC1Q9H694 974 aaKnown RBP18■□□□□ 0.47
SHANK1-204ENST00000391814 UQCRFS1P1P0C7P4 283 aa18■□□□□ 0.47
SHANK1-204ENST00000391814 TRAF3IP1Q8TDR0 691 aaPredicted RBP18■□□□□ 0.47
SHANK1-204ENST00000391814 NUP58Q9BVL2 599 aa18■□□□□ 0.47
SHANK1-204ENST00000391814 ZNF652Q9Y2D9 606 aa18■□□□□ 0.47
SHANK1-204ENST00000391814 USP37Q86T82 979 aa18■□□□□ 0.47
SHANK1-204ENST00000391814 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18■□□□□ 0.47
SHANK1-204ENST00000391814 LRRC43Q8N309 656 aa18■□□□□ 0.47
SHANK1-204ENST00000391814 SLC9C2Q5TAH2 1124 aa18■□□□□ 0.47
SHANK1-204ENST00000391814 NELFBQ8WX92 580 aa18■□□□□ 0.47
SHANK1-204ENST00000391814 TRAF5O00463 557 aa17.99■□□□□ 0.47
SHANK1-204ENST00000391814 SV2BQ7L1I2 683 aa17.99■□□□□ 0.47
SHANK1-204ENST00000391814 INF2Q27J81 1249 aa17.99■□□□□ 0.47
SHANK1-204ENST00000391814 TYW1BQ6NUM6 668 aa17.99■□□□□ 0.47
SHANK1-204ENST00000391814 RASEFQ8IZ41 740 aa17.99■□□□□ 0.47
SHANK1-204ENST00000391814 MORC4Q8TE76 937 aa17.99■□□□□ 0.47
SHANK1-204ENST00000391814 EPRSP07814 1512 aaKnown RBP17.99■□□□□ 0.47
SHANK1-204ENST00000391814 RGS16O15492 202 aaPredicted RBP17.99■□□□□ 0.47
SHANK1-204ENST00000391814 POSTNQ15063 836 aa17.99■□□□□ 0.47
SHANK1-204ENST00000391814 C6orf50Q9HD87 102 aa17.99■□□□□ 0.47
SHANK1-204ENST00000391814 I3L4J1 428 aa17.99■□□□□ 0.47
SHANK1-204ENST00000391814 NR1I2O75469 434 aa17.99■□□□□ 0.47
SHANK1-204ENST00000391814 TFCP2Q12800 502 aa17.99■□□□□ 0.47
SHANK1-204ENST00000391814 OTUD7BQ6GQQ9 843 aa17.99■□□□□ 0.47
SHANK1-204ENST00000391814 ASIC3Q9UHC3 531 aa17.99■□□□□ 0.47
SHANK1-204ENST00000391814 NRBP1Q9UHY1 535 aa17.99■□□□□ 0.47
SHANK1-204ENST00000391814 RASSF2P50749 326 aa17.99■□□□□ 0.47
SHANK1-204ENST00000391814 CSGALNACT2Q8N6G5 542 aa17.99■□□□□ 0.47
SHANK1-204ENST00000391814 STX2P32856 288 aa17.98■□□□□ 0.47
SHANK1-204ENST00000391814 KRT9P35527 623 aa17.98■□□□□ 0.47
SHANK1-204ENST00000391814 VWA3BQ502W6 1294 aa17.98■□□□□ 0.47
SHANK1-204ENST00000391814 FAF1Q9UNN5 650 aaPredicted RBP17.98■□□□□ 0.47
SHANK1-204ENST00000391814 NFE2L3Q9Y4A8 694 aa17.98■□□□□ 0.47
SHANK1-204ENST00000391814 IFT88Q13099 833 aa17.98■□□□□ 0.47
SHANK1-204ENST00000391814 CC2D2AQ9P2K1 1620 aa17.98■□□□□ 0.47
SHANK1-204ENST00000391814 EPB41P11171 864 aaKnown RBP17.98■□□□□ 0.47
SHANK1-204ENST00000391814 MED4Q9NPJ6 270 aa17.98■□□□□ 0.47
SHANK1-204ENST00000391814 WWC3Q9ULE0 1092 aa17.98■□□□□ 0.47
SHANK1-204ENST00000391814 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.98■□□□□ 0.47
SHANK1-204ENST00000391814 JRKLQ9Y4A0 524 aa17.98■□□□□ 0.47
SHANK1-204ENST00000391814 KSR1Q8IVT5 923 aa17.98■□□□□ 0.47
SHANK1-204ENST00000391814 ABTB1Q969K4 478 aaPredicted RBP17.98■□□□□ 0.47
SHANK1-204ENST00000391814 FAM212AQ96EL1 285 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms