RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 PCNX4Q63HM2 1172 aa4.16□□□□□ -1.74
RNU6-541P-201ENST00000384709 LLGL2Q6P1M3 1020 aa4.16□□□□□ -1.74
RNU6-541P-201ENST00000384709 CCDC84Q86UT8 332 aaPredicted RBP4.16□□□□□ -1.74
RNU6-541P-201ENST00000384709 TRIM42Q8IWZ5 723 aa4.16□□□□□ -1.74
RNU6-541P-201ENST00000384709 GRIN3AQ8TCU5 1115 aa4.16□□□□□ -1.74
RNU6-541P-201ENST00000384709 GPBAR1Q8TDU6 330 aa4.16□□□□□ -1.74
RNU6-541P-201ENST00000384709 GAL3ST3Q96A11 431 aa4.16□□□□□ -1.74
RNU6-541P-201ENST00000384709 RSRP1Q9BUV0 290 aa4.16□□□□□ -1.74
RNU6-541P-201ENST00000384709 YIPF2Q9BWQ6 316 aa4.16□□□□□ -1.74
RNU6-541P-201ENST00000384709 ATXN3LQ9H3M9 355 aa4.16□□□□□ -1.74
RNU6-541P-201ENST00000384709 SEMA6CQ9H3T2 930 aa4.16□□□□□ -1.74
RNU6-541P-201ENST00000384709 C1GALT1Q9NS00 363 aa4.16□□□□□ -1.74
RNU6-541P-201ENST00000384709 FAM105AQ9NUU6 356 aa4.16□□□□□ -1.74
RNU6-541P-201ENST00000384709 TTF2Q9UNY4 1162 aaKnown RBP4.16□□□□□ -1.74
RNU6-541P-201ENST00000384709 TACC3Q9Y6A5 838 aa4.16□□□□□ -1.74
RNU6-541P-201ENST00000384709 HMX2A2RU54 273 aa4.15□□□□□ -1.75
RNU6-541P-201ENST00000384709 FBXO24O75426 580 aa4.15□□□□□ -1.75
RNU6-541P-201ENST00000384709 ZNF16P17020 682 aaPredicted RBP4.15□□□□□ -1.75
RNU6-541P-201ENST00000384709 NTF4P34130 210 aa4.15□□□□□ -1.75
RNU6-541P-201ENST00000384709 MAP7Q14244 749 aa4.15□□□□□ -1.75
RNU6-541P-201ENST00000384709 ZNF326Q5BKZ1 582 aaKnown RBP4.15□□□□□ -1.75
RNU6-541P-201ENST00000384709 MEI1Q5TIA1 1274 aa4.15□□□□□ -1.75
RNU6-541P-201ENST00000384709 MPRIPQ6WCQ1 1025 aa4.15□□□□□ -1.75
RNU6-541P-201ENST00000384709 RNF214Q8ND24 703 aa4.15□□□□□ -1.75
RNU6-541P-201ENST00000384709 FBLIM1Q8WUP2 373 aa4.15□□□□□ -1.75
RNU6-541P-201ENST00000384709 BCL2L13Q9BXK5 485 aa4.15□□□□□ -1.75
RNU6-541P-201ENST00000384709 KCNQ5Q9NR82 932 aa4.15□□□□□ -1.75
RNU6-541P-201ENST00000384709 RAD18Q9NS91 495 aa4.15□□□□□ -1.75
RNU6-541P-201ENST00000384709 PRKAG2Q9UGJ0 569 aa4.15□□□□□ -1.75
RNU6-541P-201ENST00000384709 FAM95CA0A1B0GW59 222 aa4.14□□□□□ -1.75
RNU6-541P-201ENST00000384709 CAP2P40123 477 aa4.14□□□□□ -1.75
RNU6-541P-201ENST00000384709 ASPAP45381 313 aa4.14□□□□□ -1.75
RNU6-541P-201ENST00000384709 LIG3P49916 1009 aa4.14□□□□□ -1.75
RNU6-541P-201ENST00000384709 MAP1SQ66K74 1059 aaPredicted RBP4.14□□□□□ -1.75
RNU6-541P-201ENST00000384709 TTBK2Q6IQ55 1244 aa4.14□□□□□ -1.75
RNU6-541P-201ENST00000384709 CYFIP1Q7L576 1253 aa4.14□□□□□ -1.75
RNU6-541P-201ENST00000384709 ERMP1Q7Z2K6 904 aa4.14□□□□□ -1.75
RNU6-541P-201ENST00000384709 ZAR1Q86SH2 424 aa4.14□□□□□ -1.75
RNU6-541P-201ENST00000384709 GIPC2Q8TF65 315 aa4.14□□□□□ -1.75
RNU6-541P-201ENST00000384709 KCNB2Q92953 911 aa4.14□□□□□ -1.75
RNU6-541P-201ENST00000384709 ZC3H12CQ9C0D7 883 aaKnown RBP4.14□□□□□ -1.75
RNU6-541P-201ENST00000384709 SNCAIPQ9Y6H5 919 aa4.14□□□□□ -1.75
RNU6-541P-201ENST00000384709 KIAA1324LA8MWY0 1029 aaPredicted RBP4.13□□□□□ -1.75
RNU6-541P-201ENST00000384709 GFRA2O00451 464 aa4.13□□□□□ -1.75
RNU6-541P-201ENST00000384709 F13BP05160 661 aa4.13□□□□□ -1.75
RNU6-541P-201ENST00000384709 NEFMP07197 916 aa4.13□□□□□ -1.75
RNU6-541P-201ENST00000384709 TXKP42681 527 aa4.13□□□□□ -1.75
RNU6-541P-201ENST00000384709 CD97P48960 835 aa4.13□□□□□ -1.75
RNU6-541P-201ENST00000384709 USP11P51784 963 aa4.13□□□□□ -1.75
RNU6-541P-201ENST00000384709 PTPN11Q06124 597 aaPredicted RBP4.13□□□□□ -1.75
RNU6-541P-201ENST00000384709 LRP8Q14114 963 aa4.13□□□□□ -1.75
RNU6-541P-201ENST00000384709 TTLL4Q14679 1199 aa4.13□□□□□ -1.75
RNU6-541P-201ENST00000384709 CCDC85BQ15834 202 aaPredicted RBP4.13□□□□□ -1.75
RNU6-541P-201ENST00000384709 PAOXQ6QHF9 649 aa4.13□□□□□ -1.75
RNU6-541P-201ENST00000384709 DYMQ7RTS9 669 aa4.13□□□□□ -1.75
RNU6-541P-201ENST00000384709 PHC3Q8NDX5 983 aa4.13□□□□□ -1.75
RNU6-541P-201ENST00000384709 RGS22Q8NE09 1264 aa4.13□□□□□ -1.75
RNU6-541P-201ENST00000384709 RHOVQ96L33 236 aa4.13□□□□□ -1.75
RNU6-541P-201ENST00000384709 FAM161BQ96MY7 647 aa4.13□□□□□ -1.75
RNU6-541P-201ENST00000384709 KCNF1Q9H3M0 494 aa4.13□□□□□ -1.75
RNU6-541P-201ENST00000384709 PCOLCE2Q9UKZ9 415 aa4.13□□□□□ -1.75
RNU6-541P-201ENST00000384709 FANCGO15287 622 aa4.12□□□□□ -1.75
RNU6-541P-201ENST00000384709 NFICP08651 508 aa4.12□□□□□ -1.75
RNU6-541P-201ENST00000384709 TFE3P19532 575 aaPredicted RBP4.12□□□□□ -1.75
RNU6-541P-201ENST00000384709 SPINK2P20155 84 aa4.12□□□□□ -1.75
RNU6-541P-201ENST00000384709 GARTP22102 1010 aa4.12□□□□□ -1.75
RNU6-541P-201ENST00000384709 ADMP35318 185 aa4.12□□□□□ -1.75
RNU6-541P-201ENST00000384709 LMNB2Q03252 620 aa4.12□□□□□ -1.75
RNU6-541P-201ENST00000384709 NFKBIBQ15653 356 aa4.12□□□□□ -1.75
RNU6-541P-201ENST00000384709 ZBTB37Q5TC79 503 aa4.12□□□□□ -1.75
RNU6-541P-201ENST00000384709 INTS5Q6P9B9 1019 aaKnown RBP4.12□□□□□ -1.75
RNU6-541P-201ENST00000384709 SMYD4Q8IYR2 804 aaPredicted RBP4.12□□□□□ -1.75
RNU6-541P-201ENST00000384709 SHKBP1Q8TBC3 707 aa4.12□□□□□ -1.75
RNU6-541P-201ENST00000384709 METTL22Q9BUU2 404 aaPredicted RBP4.12□□□□□ -1.75
RNU6-541P-201ENST00000384709 CBX8Q9HC52 389 aa4.12□□□□□ -1.75
RNU6-541P-201ENST00000384709 AP4E1Q9UPM8 1137 aa4.12□□□□□ -1.75
RNU6-541P-201ENST00000384709 FAM221AA4D161 298 aa4.11□□□□□ -1.75
RNU6-541P-201ENST00000384709 DYNC1LI2O43237 492 aaPredicted RBP4.11□□□□□ -1.75
RNU6-541P-201ENST00000384709 PWP1Q13610 501 aa4.11□□□□□ -1.75
RNU6-541P-201ENST00000384709 INPP5AQ14642 412 aa4.11□□□□□ -1.75
RNU6-541P-201ENST00000384709 LRFN4Q6PJG9 635 aa4.11□□□□□ -1.75
RNU6-541P-201ENST00000384709 OGFOD3Q6PK18 319 aa4.11□□□□□ -1.75
RNU6-541P-201ENST00000384709 FAM214BQ7L5A3 538 aa4.11□□□□□ -1.75
RNU6-541P-201ENST00000384709 SHISA5Q8N114 240 aa4.11□□□□□ -1.75
RNU6-541P-201ENST00000384709 KCT2Q8NC54 265 aa4.11□□□□□ -1.75
RNU6-541P-201ENST00000384709 ISL2Q96A47 359 aa4.11□□□□□ -1.75
RNU6-541P-201ENST00000384709 MRS2Q9HD23 443 aa4.11□□□□□ -1.75
RNU6-541P-201ENST00000384709 VTI1BQ9UEU0 232 aa4.11□□□□□ -1.75
RNU6-541P-201ENST00000384709 PCDHB5Q9Y5E4 795 aa4.11□□□□□ -1.75
RNU6-541P-201ENST00000384709 PRR36Q9H6K5 1346 aa4.11□□□□□ -1.75
RNU6-541P-201ENST00000384709 HYAL3O43820 417 aaPredicted RBP4.1□□□□□ -1.75
RNU6-541P-201ENST00000384709 CILPO75339 1184 aa4.1□□□□□ -1.75
RNU6-541P-201ENST00000384709 MED26O95402 600 aa4.1□□□□□ -1.75
RNU6-541P-201ENST00000384709 RXRBP28702 533 aa4.1□□□□□ -1.75
RNU6-541P-201ENST00000384709 CYP27A1Q02318 531 aa4.1□□□□□ -1.75
RNU6-541P-201ENST00000384709 RPL6Q02878 288 aaKnown RBP4.1□□□□□ -1.75
RNU6-541P-201ENST00000384709 MSMPQ1L6U9 139 aa4.1□□□□□ -1.75
RNU6-541P-201ENST00000384709 TSNAXIP1Q2TAA8 658 aa4.1□□□□□ -1.75
RNU6-541P-201ENST00000384709 PPM1JQ5JR12 505 aa4.1□□□□□ -1.75
RNU6-541P-201ENST00000384709 DTX1Q86Y01 620 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms