RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 RIMBP2O15034 1052 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 F13A1P00488 732 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 PRIM1P49642 420 aaKnown RBP6.53□□□□□ -1.36
RFX3-204ENST00000382004 TBC1D8BQ0IIM8 1120 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 ZNF174Q15697 407 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 MUM1L1Q5H9M0 696 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 MIGA1Q8NAN2 632 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 FAF1Q9UNN5 650 aaPredicted RBP6.53□□□□□ -1.36
RFX3-204ENST00000382004 JAG2Q9Y219 1238 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 BZW2Q9Y6E2 419 aaKnown RBP6.53□□□□□ -1.36
RFX3-204ENST00000382004 SMARCA2P51531 1590 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 ATICP31939 592 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 APOBRQ0VD83 1088 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 LETM2Q2VYF4 491 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 VPS37BQ9H9H4 285 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 ESYT2A0FGR8 921 aa6.52□□□□□ -1.36
RFX3-204ENST00000382004 GSTA1P08263 222 aa6.52□□□□□ -1.36
RFX3-204ENST00000382004 GSTA2P09210 222 aa6.52□□□□□ -1.36
RFX3-204ENST00000382004 GNA11P29992 359 aa6.52□□□□□ -1.36
RFX3-204ENST00000382004 CASP2P42575 452 aa6.52□□□□□ -1.36
RFX3-204ENST00000382004 DBN1Q16643 649 aa6.52□□□□□ -1.36
RFX3-204ENST00000382004 VWA3BQ502W6 1294 aa6.52□□□□□ -1.36
RFX3-204ENST00000382004 CCDC184Q52MB2 194 aa6.52□□□□□ -1.36
RFX3-204ENST00000382004 MAGEB6Q8N7X4 407 aa6.52□□□□□ -1.36
RFX3-204ENST00000382004 ZKSCAN5Q9Y2L8 839 aa6.52□□□□□ -1.36
RFX3-204ENST00000382004 TUBBP07437 444 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 KRT19P08727 400 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 VPS41P49754 854 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 RAB3GAP1Q15042 981 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 JADE1Q6IE81 842 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 UBE2Q2Q8WVN8 375 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 MYO1AQ9UBC5 1043 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 BCAP29Q9UHQ4 241 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 CEP104O60308 925 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 CCDC93Q567U6 631 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 DENND2CQ68D51 928 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 CCDC105Q8IYK2 499 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 DCLK2Q8N568 766 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 POMGNT1Q8WZA1 660 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 NOX5Q96PH1 765 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 DHX29Q7Z478 1369 aaKnown RBP6.52□□□□□ -1.37
RFX3-204ENST00000382004 TRIM27P14373 513 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 GCKP35557 465 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 GNL1P36915 607 aaPredicted RBP6.52□□□□□ -1.37
RFX3-204ENST00000382004 SKA2Q8WVK7 121 aaPredicted RBP6.52□□□□□ -1.37
RFX3-204ENST00000382004 GPCPD1Q9NPB8 672 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 CCDC61Q9Y6R9 512 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 CADPSQ9ULU8 1353 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 DDX39AO00148 427 aaKnown RBP6.52□□□□□ -1.37
RFX3-204ENST00000382004 CALUO43852 315 aaPredicted RBP6.52□□□□□ -1.37
RFX3-204ENST00000382004 PDE4DQ08499 809 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 FCHSD1Q86WN1 690 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 CTAGE3PQ8IX95 158 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 IGSF22Q8N9C0 903 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 IQUBQ8NA54 791 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 ACSBG1Q96GR2 724 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 UIMC1Q96RL1 719 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 PLCB1Q9NQ66 1216 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 GOLGA6BA6NDN3 693 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 ABL1P00519 1130 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 APOEP02649 317 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 RUFY4Q6ZNE9 571 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 TEX13AQ9BXU3 409 aaPredicted RBP6.52□□□□□ -1.37
RFX3-204ENST00000382004 SAP30BPQ9UHR5 308 aaKnown RBP6.52□□□□□ -1.37
RFX3-204ENST00000382004 NOP56O00567 594 aaKnown RBP6.52□□□□□ -1.37
RFX3-204ENST00000382004 CCNT1O60563 726 aaKnown RBP6.52□□□□□ -1.37
RFX3-204ENST00000382004 SDSP20132 328 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 FAM71BQ8TC56 605 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 VGLL3A8MV65 326 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 LPXNO60711 386 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 SAT1P21673 171 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 IRX4P78413 519 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 ITKQ08881 620 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 SDCCAG3Q96C92 435 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 CTTNBP2NLQ9P2B4 639 aa6.52□□□□□ -1.37
RFX3-204ENST00000382004 HMGB1P1B2RPK0 211 aaPredicted RBP6.51□□□□□ -1.37
RFX3-204ENST00000382004 HP1BP3Q5SSJ5 553 aaPredicted RBP6.51□□□□□ -1.37
RFX3-204ENST00000382004 PPP2R5AQ15172 486 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 CYP26C1Q6V0L0 522 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 NME9Q86XW9 330 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 TRIM56Q9BRZ2 755 aaKnown RBP6.51□□□□□ -1.37
RFX3-204ENST00000382004 OATP04181 439 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 PARP1P09874 1014 aaKnown RBP6.51□□□□□ -1.37
RFX3-204ENST00000382004 TROVE2P10155 538 aaKnown RBP eCLIP6.51□□□□□ -1.37
RFX3-204ENST00000382004 MYCLP12524 364 aaPredicted RBP6.51□□□□□ -1.37
RFX3-204ENST00000382004 ARHGAP25P42331 645 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 BMP2KLQ5H9B9 411 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 MAP3K21Q5TCX8 1036 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 KRT12Q99456 494 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 ZRANB1Q9UGI0 708 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 A0A1B0GVL5 298 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 RASSF2P50749 326 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 PALM2Q8IXS6 379 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 TBC1D7Q9P0N9 293 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 PALM3A6NDB9 673 aaPredicted RBP6.51□□□□□ -1.37
RFX3-204ENST00000382004 SERPINB6P35237 376 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 RHPN1Q8TCX5 695 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 CARD6Q9BX69 1037 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 PIK3R4Q99570 1358 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 FOXO3O43524 673 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms