RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 NEK4P51957 841 aa24.25■■□□□ 1.47
TSSC4-203ENST00000380996 TRDNQ13061 729 aa24.25■■□□□ 1.47
TSSC4-203ENST00000380996 RNF41Q9H4P4 317 aaPredicted RBP24.25■■□□□ 1.47
TSSC4-203ENST00000380996 ZSWIM6Q9HCJ5 1215 aa24.25■■□□□ 1.47
TSSC4-203ENST00000380996 CNOT7Q9UIV1 285 aaKnown RBP24.25■■□□□ 1.47
TSSC4-203ENST00000380996 PCDHAC2Q9Y5I4 1007 aa24.25■■□□□ 1.47
TSSC4-203ENST00000380996 DICER1Q9UPY3 1922 aaKnown RBP24.24■■□□□ 1.47
TSSC4-203ENST00000380996 SBF1O95248 1867 aa24.24■■□□□ 1.47
TSSC4-203ENST00000380996 H7C1D1 291 aa24.24■■□□□ 1.47
TSSC4-203ENST00000380996 MYO1BO43795 1136 aa24.24■■□□□ 1.47
TSSC4-203ENST00000380996 SLC3A2P08195 630 aaKnown RBP24.24■■□□□ 1.47
TSSC4-203ENST00000380996 BLOC1S2Q6QNY1 142 aa24.24■■□□□ 1.47
TSSC4-203ENST00000380996 MICALL2Q8IY33 904 aa24.24■■□□□ 1.47
TSSC4-203ENST00000380996 IDI2Q9BXS1 227 aa24.24■■□□□ 1.47
TSSC4-203ENST00000380996 NPM3O75607 178 aaKnown RBP24.23■■□□□ 1.47
TSSC4-203ENST00000380996 POLR3DP05423 398 aaPredicted RBP24.23■■□□□ 1.47
TSSC4-203ENST00000380996 PICALMQ13492 652 aa24.23■■□□□ 1.47
TSSC4-203ENST00000380996 DPY19L2Q6NUT2 758 aa24.23■■□□□ 1.47
TSSC4-203ENST00000380996 UPF3BQ9BZI7 483 aaKnown RBP24.23■■□□□ 1.47
TSSC4-203ENST00000380996 TDRD3Q9H7E2 651 aaKnown RBP24.23■■□□□ 1.47
TSSC4-203ENST00000380996 AKNAD1Q5T1N1 836 aa24.22■■□□□ 1.47
TSSC4-203ENST00000380996 MFSD6Q6ZSS7 791 aa24.22■■□□□ 1.47
TSSC4-203ENST00000380996 STOX1Q6ZVD7 989 aa24.22■■□□□ 1.47
TSSC4-203ENST00000380996 RUFY3Q7L099 469 aa24.22■■□□□ 1.47
TSSC4-203ENST00000380996 RALYLQ86SE5 291 aaKnown RBP24.22■■□□□ 1.47
TSSC4-203ENST00000380996 NCOA7Q8NI08 942 aa24.22■■□□□ 1.47
TSSC4-203ENST00000380996 CNNM2Q9H8M5 875 aa24.22■■□□□ 1.47
TSSC4-203ENST00000380996 PCP11498 1178 aaKnown RBP24.21■■□□□ 1.47
TSSC4-203ENST00000380996 CTDSPL2Q05D32 466 aa24.21■■□□□ 1.47
TSSC4-203ENST00000380996 BECN1Q14457 450 aa24.21■■□□□ 1.47
TSSC4-203ENST00000380996 C12orf60Q5U649 245 aa24.21■■□□□ 1.47
TSSC4-203ENST00000380996 STAG1Q8WVM7 1258 aa24.21■■□□□ 1.47
TSSC4-203ENST00000380996 ZBED3Q96IU2 234 aaPredicted RBP24.21■■□□□ 1.47
TSSC4-203ENST00000380996 NBPF3Q9H094 633 aa24.21■■□□□ 1.47
TSSC4-203ENST00000380996 TBC1D10CQ8IV04 446 aa24.2■■□□□ 1.47
TSSC4-203ENST00000380996 SNX21Q969T3 373 aa24.2■■□□□ 1.47
TSSC4-203ENST00000380996 OSBPL5Q9H0X9 879 aaPredicted RBP24.2■■□□□ 1.47
TSSC4-203ENST00000380996 GPRC5DQ9NZD1 345 aa24.2■■□□□ 1.47
TSSC4-203ENST00000380996 SAP30BPQ9UHR5 308 aaKnown RBP24.2■■□□□ 1.47
TSSC4-203ENST00000380996 RPS6KB1P23443 525 aa24.2■■□□□ 1.46
TSSC4-203ENST00000380996 SPDYE2Q495Y8 402 aa24.2■■□□□ 1.46
TSSC4-203ENST00000380996 TTC6Q86TZ1 520 aa24.2■■□□□ 1.46
TSSC4-203ENST00000380996 KRT23Q9C075 422 aa24.2■■□□□ 1.46
TSSC4-203ENST00000380996 DDX4Q9NQI0 724 aaKnown RBP24.2■■□□□ 1.46
TSSC4-203ENST00000380996 ZNF70Q9UC06 446 aaPredicted RBP24.2■■□□□ 1.46
TSSC4-203ENST00000380996 CYP2D7A0A087X1C5 515 aa24.19■■□□□ 1.46
TSSC4-203ENST00000380996 WNT10BO00744 389 aa24.19■■□□□ 1.46
TSSC4-203ENST00000380996 ENTPD3O75355 529 aa24.19■■□□□ 1.46
TSSC4-203ENST00000380996 DDNO94850 711 aaPredicted RBP24.19■■□□□ 1.46
TSSC4-203ENST00000380996 NFIAQ12857 509 aa24.19■■□□□ 1.46
TSSC4-203ENST00000380996 FKBP1CQ5VVH2 108 aa24.19■■□□□ 1.46
TSSC4-203ENST00000380996 DHX32Q7L7V1 743 aaKnown RBP24.19■■□□□ 1.46
TSSC4-203ENST00000380996 PDRG1Q9NUG6 133 aa24.19■■□□□ 1.46
TSSC4-203ENST00000380996 SHTN1A0MZ66 631 aa24.18■■□□□ 1.46
TSSC4-203ENST00000380996 LMOD1P29536 600 aaPredicted RBP24.18■■□□□ 1.46
TSSC4-203ENST00000380996 MCM2P49736 904 aa24.18■■□□□ 1.46
TSSC4-203ENST00000380996 PDE4BQ07343 736 aa24.18■■□□□ 1.46
TSSC4-203ENST00000380996 RBM26Q5T8P6 1007 aaKnown RBP24.18■■□□□ 1.46
TSSC4-203ENST00000380996 HSCBQ8IWL3 235 aa24.18■■□□□ 1.46
TSSC4-203ENST00000380996 DHX36Q9H2U1 1008 aaKnown RBP24.18■■□□□ 1.46
TSSC4-203ENST00000380996 ADAMTSL1Q8N6G6 1762 aa24.17■■□□□ 1.46
TSSC4-203ENST00000380996 CYP2D6P10635 497 aa24.17■■□□□ 1.46
TSSC4-203ENST00000380996 NT5C2P49902 561 aa24.17■■□□□ 1.46
TSSC4-203ENST00000380996 CACNB3P54284 484 aa24.17■■□□□ 1.46
TSSC4-203ENST00000380996 KIF4BQ2VIQ3 1234 aa24.17■■□□□ 1.46
TSSC4-203ENST00000380996 ZNF287Q9HBT7 754 aa24.17■■□□□ 1.46
TSSC4-203ENST00000380996 FAM198AQ9UFP1 575 aa24.17■■□□□ 1.46
TSSC4-203ENST00000380996 CLRN2A0PK11 232 aa24.16■■□□□ 1.46
TSSC4-203ENST00000380996 HLA-DOAP06340 250 aa24.16■■□□□ 1.46
TSSC4-203ENST00000380996 FGRP09769 529 aa24.16■■□□□ 1.46
TSSC4-203ENST00000380996 CPA1P15085 419 aa24.16■■□□□ 1.46
TSSC4-203ENST00000380996 MCM5P33992 734 aa24.16■■□□□ 1.46
TSSC4-203ENST00000380996 NBPF9Q3BBW0 867 aa24.16■■□□□ 1.46
TSSC4-203ENST00000380996 SAMD7Q7Z3H4 446 aa24.16■■□□□ 1.46
TSSC4-203ENST00000380996 TTC14Q96N46 770 aa24.16■■□□□ 1.46
TSSC4-203ENST00000380996 TOMM22Q9NS69 142 aa24.16■■□□□ 1.46
TSSC4-203ENST00000380996 TIAM2Q8IVF5 1701 aa24.16■■□□□ 1.46
TSSC4-203ENST00000380996 TCP10Q12799 353 aa24.15■■□□□ 1.46
TSSC4-203ENST00000380996 TBC1D10BQ4KMP7 808 aaPredicted RBP24.15■■□□□ 1.46
TSSC4-203ENST00000380996 MB21D2Q8IYB1 491 aaPredicted RBP24.15■■□□□ 1.46
TSSC4-203ENST00000380996 ALDH8A1Q9H2A2 487 aaPredicted RBP24.15■■□□□ 1.46
TSSC4-203ENST00000380996 VEZTQ9HBM0 779 aa24.15■■□□□ 1.46
TSSC4-203ENST00000380996 DAXXQ9UER7 740 aaPredicted RBP24.15■■□□□ 1.46
TSSC4-203ENST00000380996 ROBO3Q96MS0 1386 aa24.15■■□□□ 1.46
TSSC4-203ENST00000380996 LAMA4Q16363 1823 aa24.15■■□□□ 1.46
TSSC4-203ENST00000380996 PLCD1P51178 756 aa24.15■■□□□ 1.46
TSSC4-203ENST00000380996 ANKRD1Q15327 319 aa24.15■■□□□ 1.46
TSSC4-203ENST00000380996 SLC4A8Q2Y0W8 1093 aa24.15■■□□□ 1.46
TSSC4-203ENST00000380996 STK11IPQ8N1F8 1099 aa24.15■■□□□ 1.46
TSSC4-203ENST00000380996 ESR2Q92731 530 aa24.15■■□□□ 1.46
TSSC4-203ENST00000380996 IPO9Q96P70 1041 aaKnown RBP24.15■■□□□ 1.46
TSSC4-203ENST00000380996 TAOK2Q9UL54 1235 aa24.15■■□□□ 1.46
TSSC4-203ENST00000380996 NEDD4P46934 1319 aa24.14■■□□□ 1.46
TSSC4-203ENST00000380996 WDR19Q8NEZ3 1342 aa24.14■■□□□ 1.46
TSSC4-203ENST00000380996 B4E1Z4 1266 aa24.14■■□□□ 1.45
TSSC4-203ENST00000380996 TCP10L2B9ZVM9 353 aa24.14■■□□□ 1.45
TSSC4-203ENST00000380996 ORC4O43929 436 aa24.14■■□□□ 1.45
TSSC4-203ENST00000380996 TNNI2P48788 182 aa24.14■■□□□ 1.45
TSSC4-203ENST00000380996 FGD1P98174 961 aa24.14■■□□□ 1.45
TSSC4-203ENST00000380996 EXOSC10Q01780 885 aaKnown RBP24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms