RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 MS4A4AQ96JQ5 239 aa30.2■■■□□ 2.43
TNFRSF4-201ENST00000379236 RFX7Q2KHR2 1363 aa30.19■■■□□ 2.42
TNFRSF4-201ENST00000379236 MAP4K4O95819 1239 aaPredicted RBP30.19■■■□□ 2.42
TNFRSF4-201ENST00000379236 CETPP11597 493 aa30.19■■■□□ 2.42
TNFRSF4-201ENST00000379236 CRHR2Q13324 411 aa30.19■■■□□ 2.42
TNFRSF4-201ENST00000379236 SNAPC2Q13487 334 aa30.19■■■□□ 2.42
TNFRSF4-201ENST00000379236 BRI3BPQ8WY22 251 aa30.19■■■□□ 2.42
TNFRSF4-201ENST00000379236 PTPN18Q99952 460 aa30.19■■■□□ 2.42
TNFRSF4-201ENST00000379236 DBNLQ9UJU6 430 aaKnown RBP30.19■■■□□ 2.42
TNFRSF4-201ENST00000379236 PPATQ06203 517 aa30.18■■■□□ 2.42
TNFRSF4-201ENST00000379236 TAF1CQ15572 869 aaPredicted RBP30.18■■■□□ 2.42
TNFRSF4-201ENST00000379236 NAA16Q6N069 864 aaPredicted RBP30.18■■■□□ 2.42
TNFRSF4-201ENST00000379236 RPAP2Q8IXW5 612 aaPredicted RBP30.18■■■□□ 2.42
TNFRSF4-201ENST00000379236 ZNF512BQ96KM6 892 aaPredicted RBP30.18■■■□□ 2.42
TNFRSF4-201ENST00000379236 DOCK1Q14185 1865 aa30.18■■■□□ 2.42
TNFRSF4-201ENST00000379236 AACSQ86V21 672 aa30.17■■■□□ 2.42
TNFRSF4-201ENST00000379236 ZNF384Q8TF68 577 aa30.17■■■□□ 2.42
TNFRSF4-201ENST00000379236 EAF2Q96CJ1 260 aaPredicted RBP30.17■■■□□ 2.42
TNFRSF4-201ENST00000379236 TLR7Q9NYK1 1049 aaKnown RBP30.17■■■□□ 2.42
TNFRSF4-201ENST00000379236 ZNF112Q9UJU3 913 aa30.17■■■□□ 2.42
TNFRSF4-201ENST00000379236 IRF6O14896 467 aa30.16■■■□□ 2.42
TNFRSF4-201ENST00000379236 BAG3O95817 575 aa30.16■■■□□ 2.42
TNFRSF4-201ENST00000379236 ZFYVE28Q9HCC9 887 aa30.16■■■□□ 2.42
TNFRSF4-201ENST00000379236 DDX4Q9NQI0 724 aaKnown RBP30.16■■■□□ 2.42
TNFRSF4-201ENST00000379236 CDK5RAP2Q96SN8 1893 aa30.16■■■□□ 2.42
TNFRSF4-201ENST00000379236 ZAP70P43403 619 aa30.15■■■□□ 2.42
TNFRSF4-201ENST00000379236 RHBDL3P58872 404 aa30.15■■■□□ 2.42
TNFRSF4-201ENST00000379236 TEX11Q8IYF3 940 aa30.15■■■□□ 2.42
TNFRSF4-201ENST00000379236 ERO1AQ96HE7 468 aa30.15■■■□□ 2.42
TNFRSF4-201ENST00000379236 APBB1O00213 710 aa30.14■■■□□ 2.42
TNFRSF4-201ENST00000379236 CYP2E1P05181 493 aaPredicted RBP30.14■■■□□ 2.42
TNFRSF4-201ENST00000379236 NOL9Q5SY16 702 aaKnown RBP30.14■■■□□ 2.42
TNFRSF4-201ENST00000379236 ZBTB40Q9NUA8 1239 aa30.14■■■□□ 2.42
TNFRSF4-201ENST00000379236 FOCADQ5VW36 1801 aa30.14■■■□□ 2.42
TNFRSF4-201ENST00000379236 DDTLA6NHG4 134 aaPredicted RBP30.13■■■□□ 2.41
TNFRSF4-201ENST00000379236 IL1RAPL2Q9NP60 686 aa30.13■■■□□ 2.41
TNFRSF4-201ENST00000379236 PICK1Q9NRD5 415 aa30.13■■■□□ 2.41
TNFRSF4-201ENST00000379236 ATAD5Q96QE3 1844 aa30.12■■■□□ 2.41
TNFRSF4-201ENST00000379236 IGSF3O75054 1194 aa30.12■■■□□ 2.41
TNFRSF4-201ENST00000379236 NPM3O75607 178 aaKnown RBP30.12■■■□□ 2.41
TNFRSF4-201ENST00000379236 PLCG2P16885 1265 aa30.12■■■□□ 2.41
TNFRSF4-201ENST00000379236 FBXO46Q6PJ61 603 aaPredicted RBP30.12■■■□□ 2.41
TNFRSF4-201ENST00000379236 SH3BP5LQ7L8J4 393 aa30.12■■■□□ 2.41
TNFRSF4-201ENST00000379236 FAM43AQ8N2R8 423 aa30.12■■■□□ 2.41
TNFRSF4-201ENST00000379236 RHPN1Q8TCX5 695 aa30.12■■■□□ 2.41
TNFRSF4-201ENST00000379236 AATFQ9NY61 560 aaKnown RBP eCLIP30.12■■■□□ 2.41
TNFRSF4-201ENST00000379236 ATRNL1Q5VV63 1379 aa30.12■■■□□ 2.41
TNFRSF4-201ENST00000379236 SP3Q02447 781 aa30.11■■■□□ 2.41
TNFRSF4-201ENST00000379236 PDE3AQ14432 1141 aa30.11■■■□□ 2.41
TNFRSF4-201ENST00000379236 CLASRPQ8N2M8 674 aaKnown RBP30.11■■■□□ 2.41
TNFRSF4-201ENST00000379236 KIF1BPQ96EK5 621 aa30.11■■■□□ 2.41
TNFRSF4-201ENST00000379236 BCL11AQ9H165 835 aa30.11■■■□□ 2.41
TNFRSF4-201ENST00000379236 HPS5Q9UPZ3 1129 aa30.11■■■□□ 2.41
TNFRSF4-201ENST00000379236 TRIM17Q9Y577 477 aa30.11■■■□□ 2.41
TNFRSF4-201ENST00000379236 SCYL3Q8IZE3 742 aa30.1■■■□□ 2.41
TNFRSF4-201ENST00000379236 ZCCHC17Q9NP64 241 aaKnown RBP30.1■■■□□ 2.41
TNFRSF4-201ENST00000379236 COL2A1P02458 1487 aaPredicted RBP30.1■■■□□ 2.41
TNFRSF4-201ENST00000379236 IDH1O75874 414 aaKnown RBP30.09■■■□□ 2.41
TNFRSF4-201ENST00000379236 CD99L2Q8TCZ2 262 aa30.09■■■□□ 2.41
TNFRSF4-201ENST00000379236 SH3RF3Q8TEJ3 882 aaPredicted RBP30.09■■■□□ 2.41
TNFRSF4-201ENST00000379236 OSBPL5Q9H0X9 879 aaPredicted RBP30.09■■■□□ 2.41
TNFRSF4-201ENST00000379236 PIH1D3Q9NQM4 214 aaKnown RBP30.09■■■□□ 2.41
TNFRSF4-201ENST00000379236 BTBD19C9JJ37 291 aa30.08■■■□□ 2.41
TNFRSF4-201ENST00000379236 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.08■■■□□ 2.41
TNFRSF4-201ENST00000379236 PHF20L1A8MW92 1017 aa30.07■■■□□ 2.4
TNFRSF4-201ENST00000379236 RAB11FIP3O75154 756 aa30.07■■■□□ 2.4
TNFRSF4-201ENST00000379236 IFIT2P09913 472 aaKnown RBP30.07■■■□□ 2.4
TNFRSF4-201ENST00000379236 ARHGEF6Q15052 776 aa30.07■■■□□ 2.4
TNFRSF4-201ENST00000379236 PHIPQ8WWQ0 1821 aa30.06■■■□□ 2.4
TNFRSF4-201ENST00000379236 C20orf194Q5TEA3 1177 aa30.06■■■□□ 2.4
TNFRSF4-201ENST00000379236 KCNH4Q9UQ05 1017 aa30.06■■■□□ 2.4
TNFRSF4-201ENST00000379236 PTPRFP10586 1907 aa30.06■■■□□ 2.4
TNFRSF4-201ENST00000379236 MYH1P12882 1939 aa30.06■■■□□ 2.4
TNFRSF4-201ENST00000379236 TBC1D12O60347 775 aa30.05■■■□□ 2.4
TNFRSF4-201ENST00000379236 CTNND1O60716 968 aaKnown RBP30.05■■■□□ 2.4
TNFRSF4-201ENST00000379236 CYP7A1P22680 504 aa30.05■■■□□ 2.4
TNFRSF4-201ENST00000379236 MAP3K10Q02779 954 aa30.05■■■□□ 2.4
TNFRSF4-201ENST00000379236 MAP3K12Q12852 859 aa30.05■■■□□ 2.4
TNFRSF4-201ENST00000379236 OTOP1Q7RTM1 612 aa30.05■■■□□ 2.4
TNFRSF4-201ENST00000379236 EFCC1Q9HA90 598 aa30.05■■■□□ 2.4
TNFRSF4-201ENST00000379236 ZHX2Q9Y6X8 837 aa30.05■■■□□ 2.4
TNFRSF4-201ENST00000379236 SOX10P56693 466 aa30.04■■■□□ 2.4
TNFRSF4-201ENST00000379236 PPP4CP60510 307 aa30.04■■■□□ 2.4
TNFRSF4-201ENST00000379236 MLLT1Q03111 559 aaPredicted RBP30.04■■■□□ 2.4
TNFRSF4-201ENST00000379236 ANKRD23Q86SG2 305 aa30.04■■■□□ 2.4
TNFRSF4-201ENST00000379236 SIRT2Q8IXJ6 389 aa30.04■■■□□ 2.4
TNFRSF4-201ENST00000379236 TRIM34Q9BYJ4 488 aa30.04■■■□□ 2.4
TNFRSF4-201ENST00000379236 NDUFB9Q9Y6M9 179 aa30.04■■■□□ 2.4
TNFRSF4-201ENST00000379236 CXCL11O14625 94 aa30.03■■■□□ 2.4
TNFRSF4-201ENST00000379236 PTPRAP18433 802 aa30.03■■■□□ 2.4
TNFRSF4-201ENST00000379236 KIF22Q14807 665 aa30.03■■■□□ 2.4
TNFRSF4-201ENST00000379236 ADGRA1Q86SQ6 560 aa30.03■■■□□ 2.4
TNFRSF4-201ENST00000379236 MAPKAPK5Q8IW41 473 aa30.03■■■□□ 2.4
TNFRSF4-201ENST00000379236 MAGEB6Q8N7X4 407 aa30.03■■■□□ 2.4
TNFRSF4-201ENST00000379236 TGFBRAP1Q8WUH2 860 aa30.03■■■□□ 2.4
TNFRSF4-201ENST00000379236 DHX36Q9H2U1 1008 aaKnown RBP30.03■■■□□ 2.4
TNFRSF4-201ENST00000379236 FAM196BA6NMK8 535 aa30.02■■■□□ 2.4
TNFRSF4-201ENST00000379236 PDHXO00330 501 aa30.02■■■□□ 2.4
TNFRSF4-201ENST00000379236 TLR2O60603 784 aa30.02■■■□□ 2.4
TNFRSF4-201ENST00000379236 SLURP2P0DP57 97 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms