RNA–Protein interactions for RNA: ENST00000377768.7

SNX5-202, Transcript of sorting nexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX5, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-202ENST00000377768 TPTE2Q6XPS3 522 aa18.11■□□□□ 0.49
SNX5-202ENST00000377768 MINPP1Q9UNW1 487 aa18.11■□□□□ 0.49
SNX5-202ENST00000377768 CTAGE5O15320 804 aa18.1■□□□□ 0.49
SNX5-202ENST00000377768 TRAPPC3LQ5T215 181 aa18.1■□□□□ 0.49
SNX5-202ENST00000377768 FILIP1Q7Z7B0 1213 aa18.1■□□□□ 0.49
SNX5-202ENST00000377768 AGXT2Q9BYV1 514 aa18.1■□□□□ 0.49
SNX5-202ENST00000377768 GPHNQ9NQX3 736 aaPredicted RBP18.1■□□□□ 0.49
SNX5-202ENST00000377768 ADD1P35611 737 aaKnown RBP18.1■□□□□ 0.49
SNX5-202ENST00000377768 DDX11Q96FC9 970 aa18.1■□□□□ 0.49
SNX5-202ENST00000377768 ERICH4A6NGS2 130 aa18.09■□□□□ 0.49
SNX5-202ENST00000377768 CCT2P78371 535 aaKnown RBP18.09■□□□□ 0.49
SNX5-202ENST00000377768 NBPF11Q86T75 865 aa18.09■□□□□ 0.49
SNX5-202ENST00000377768 STRBPQ96SI9 672 aaKnown RBP18.09■□□□□ 0.49
SNX5-202ENST00000377768 OSBPL5Q9H0X9 879 aaPredicted RBP18.09■□□□□ 0.49
SNX5-202ENST00000377768 GOLPH3LQ9H4A5 285 aa18.09■□□□□ 0.49
SNX5-202ENST00000377768 FHOD1Q9Y613 1164 aa18.09■□□□□ 0.49
SNX5-202ENST00000377768 TULP2O00295 520 aa18.09■□□□□ 0.49
SNX5-202ENST00000377768 PFKFB2O60825 505 aa18.09■□□□□ 0.49
SNX5-202ENST00000377768 MBD4O95243 580 aa18.09■□□□□ 0.49
SNX5-202ENST00000377768 SNW1Q13573 536 aaKnown RBP18.09■□□□□ 0.49
SNX5-202ENST00000377768 CCDC93Q567U6 631 aa18.09■□□□□ 0.49
SNX5-202ENST00000377768 ZSCAN16Q9H4T2 348 aaPredicted RBP18.09■□□□□ 0.49
SNX5-202ENST00000377768 CALCOCO1Q9P1Z2 691 aa18.09■□□□□ 0.49
SNX5-202ENST00000377768 CFAP45Q9UL16 551 aa18.09■□□□□ 0.49
SNX5-202ENST00000377768 CYP2C19P33261 490 aa18.08■□□□□ 0.48
SNX5-202ENST00000377768 GSDMDP57764 484 aa18.08■□□□□ 0.48
SNX5-202ENST00000377768 RPS8P62241 208 aaKnown RBP18.08■□□□□ 0.48
SNX5-202ENST00000377768 SLC20A2Q08357 652 aa18.08■□□□□ 0.48
SNX5-202ENST00000377768 UBE4AQ14139 1066 aa18.08■□□□□ 0.48
SNX5-202ENST00000377768 E4F1Q66K89 784 aaPredicted RBP18.08■□□□□ 0.48
SNX5-202ENST00000377768 LRRN4CLQ8ND94 238 aa18.08■□□□□ 0.48
SNX5-202ENST00000377768 NBPF3Q9H094 633 aa18.08■□□□□ 0.48
SNX5-202ENST00000377768 ARMT1Q9H993 441 aa18.08■□□□□ 0.48
SNX5-202ENST00000377768 NCOA5Q9HCD5 579 aaKnown RBP18.08■□□□□ 0.48
SNX5-202ENST00000377768 LRP2BPQ9P2M1 347 aa18.08■□□□□ 0.48
SNX5-202ENST00000377768 DENND2AQ9ULE3 1009 aa18.08■□□□□ 0.48
SNX5-202ENST00000377768 PPFIA3O75145 1194 aa18.07■□□□□ 0.48
SNX5-202ENST00000377768 BMS1Q14692 1282 aaKnown RBP18.07■□□□□ 0.48
SNX5-202ENST00000377768 RALYLQ86SE5 291 aaKnown RBP18.07■□□□□ 0.48
SNX5-202ENST00000377768 MB21D2Q8IYB1 491 aaPredicted RBP18.07■□□□□ 0.48
SNX5-202ENST00000377768 NCOA7Q8NI08 942 aa18.07■□□□□ 0.48
SNX5-202ENST00000377768 ZNF804BA4D1E1 1349 aa18.07■□□□□ 0.48
SNX5-202ENST00000377768 BECN2A8MW95 431 aa18.07■□□□□ 0.48
SNX5-202ENST00000377768 PRC1O43663 620 aa18.07■□□□□ 0.48
SNX5-202ENST00000377768 ERCC6LQ2NKX8 1250 aa18.07■□□□□ 0.48
SNX5-202ENST00000377768 TBC1D10CQ8IV04 446 aa18.07■□□□□ 0.48
SNX5-202ENST00000377768 ABCF2Q9UG63 623 aa18.07■□□□□ 0.48
SNX5-202ENST00000377768 A0A087WWV3 80 aa18.06■□□□□ 0.48
SNX5-202ENST00000377768 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.06■□□□□ 0.48
SNX5-202ENST00000377768 KLRK1P26718 216 aa18.06■□□□□ 0.48
SNX5-202ENST00000377768 PDIA3P30101 505 aaKnown RBP18.06■□□□□ 0.48
SNX5-202ENST00000377768 NFIXQ14938 502 aa18.06■□□□□ 0.48
SNX5-202ENST00000377768 VPS37DQ86XT2 251 aa18.06■□□□□ 0.48
SNX5-202ENST00000377768 CCAR1Q8IX12 1150 aaKnown RBP18.06■□□□□ 0.48
SNX5-202ENST00000377768 PPP1R13BQ96KQ4 1090 aa18.06■□□□□ 0.48
SNX5-202ENST00000377768 NOL10Q9BSC4 688 aaKnown RBP18.06■□□□□ 0.48
SNX5-202ENST00000377768 RCOR1Q9UKL0 485 aa18.06■□□□□ 0.48
SNX5-202ENST00000377768 COL1A1P02452 1464 aaPredicted RBP18.06■□□□□ 0.48
SNX5-202ENST00000377768 CLCN6P51797 869 aa18.06■□□□□ 0.48
SNX5-202ENST00000377768 ANTXR2P58335 489 aa18.06■□□□□ 0.48
SNX5-202ENST00000377768 CAVIN4Q5BKX8 364 aa18.06■□□□□ 0.48
SNX5-202ENST00000377768 MIGA1Q8NAN2 632 aa18.06■□□□□ 0.48
SNX5-202ENST00000377768 NSUN7Q8NE18 718 aaKnown RBP18.06■□□□□ 0.48
SNX5-202ENST00000377768 ENGASEQ8NFI3 743 aa18.06■□□□□ 0.48
SNX5-202ENST00000377768 EPB41L4AQ9HCS5 686 aaPredicted RBP18.06■□□□□ 0.48
SNX5-202ENST00000377768 ANO10Q9NW15 660 aa18.06■□□□□ 0.48
SNX5-202ENST00000377768 TNRC6CQ9HCJ0 1690 aaKnown RBP18.05■□□□□ 0.48
SNX5-202ENST00000377768 CTDNEP1O95476 244 aa18.05■□□□□ 0.48
SNX5-202ENST00000377768 AOPEPQ8N6M6 819 aa18.05■□□□□ 0.48
SNX5-202ENST00000377768 NKX2-3Q8TAU0 364 aa18.05■□□□□ 0.48
SNX5-202ENST00000377768 GNL3LQ9NVN8 582 aaKnown RBP18.05■□□□□ 0.48
SNX5-202ENST00000377768 IMPACTQ9P2X3 320 aa18.05■□□□□ 0.48
SNX5-202ENST00000377768 TRIM37O94972 964 aa18.05■□□□□ 0.48
SNX5-202ENST00000377768 CAPN2P17655 700 aa18.05■□□□□ 0.48
SNX5-202ENST00000377768 KCNJ6P48051 423 aa18.05■□□□□ 0.48
SNX5-202ENST00000377768 CEP57L1Q8IYX8 460 aa18.05■□□□□ 0.48
SNX5-202ENST00000377768 LCORLQ8N3X6 602 aa18.05■□□□□ 0.48
SNX5-202ENST00000377768 FAM84BQ96KN1 310 aaPredicted RBP18.05■□□□□ 0.48
SNX5-202ENST00000377768 FTOQ9C0B1 505 aaKnown RBP eCLIP18.05■□□□□ 0.48
SNX5-202ENST00000377768 BRWD3Q6RI45 1802 aa18.05■□□□□ 0.48
SNX5-202ENST00000377768 CARMIL3Q8ND23 1372 aa18.04■□□□□ 0.48
SNX5-202ENST00000377768 PTPDC1A2A3K4 754 aa18.04■□□□□ 0.48
SNX5-202ENST00000377768 PSDA5PKW4 1024 aaPredicted RBP18.04■□□□□ 0.48
SNX5-202ENST00000377768 H3BQV1 296 aa18.04■□□□□ 0.48
SNX5-202ENST00000377768 PRKAB2O43741 272 aa18.04■□□□□ 0.48
SNX5-202ENST00000377768 PNMA6AP0CW24 399 aaPredicted RBP18.04■□□□□ 0.48
SNX5-202ENST00000377768 FOSBP53539 338 aa18.04■□□□□ 0.48
SNX5-202ENST00000377768 TRDNQ13061 729 aa18.04■□□□□ 0.48
SNX5-202ENST00000377768 IFFO2Q5TF58 517 aa18.04■□□□□ 0.48
SNX5-202ENST00000377768 IFNL3Q8IZI9 196 aa18.04■□□□□ 0.48
SNX5-202ENST00000377768 SMARCC2Q8TAQ2 1214 aa18.04■□□□□ 0.48
SNX5-202ENST00000377768 ZNF274Q96GC6 653 aaPredicted RBP18.04■□□□□ 0.48
SNX5-202ENST00000377768 NAPBQ9H115 298 aa18.04■□□□□ 0.48
SNX5-202ENST00000377768 PATL2C9JE40 543 aaKnown RBP18.03■□□□□ 0.48
SNX5-202ENST00000377768 TM4SF1P30408 202 aa18.03■□□□□ 0.48
SNX5-202ENST00000377768 PLA2G4AP47712 749 aa18.03■□□□□ 0.48
SNX5-202ENST00000377768 CEBPZQ03701 1054 aaKnown RBP18.03■□□□□ 0.48
SNX5-202ENST00000377768 KRT27Q7Z3Y8 459 aa18.03■□□□□ 0.48
SNX5-202ENST00000377768 LLPHQ9BRT6 129 aaKnown RBP18.03■□□□□ 0.48
SNX5-202ENST00000377768 RAI14Q9P0K7 980 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms