RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 AKAP2Q9Y2D5 859 aa21.62■■□□□ 1.05
HLA-A-201ENST00000376802 MGAMO43451 1857 aa21.61■■□□□ 1.05
HLA-A-201ENST00000376802 DDTLA6NHG4 134 aaPredicted RBP21.61■■□□□ 1.05
HLA-A-201ENST00000376802 CXCL11O14625 94 aa21.61■■□□□ 1.05
HLA-A-201ENST00000376802 DZIP1Q86YF9 867 aaKnown RBP21.61■■□□□ 1.05
HLA-A-201ENST00000376802 TRIM47Q96LD4 638 aa21.61■■□□□ 1.05
HLA-A-201ENST00000376802 ECM2O94769 699 aaPredicted RBP21.6■■□□□ 1.05
HLA-A-201ENST00000376802 MECOMQ03112 1051 aa21.6■■□□□ 1.05
HLA-A-201ENST00000376802 MVPQ14764 893 aaKnown RBP21.6■■□□□ 1.05
HLA-A-201ENST00000376802 DOCK1Q14185 1865 aa21.6■■□□□ 1.05
HLA-A-201ENST00000376802 MROH7-TTC4A0A0A0MT08 1334 aa21.59■■□□□ 1.05
HLA-A-201ENST00000376802 BCAR3O75815 825 aa21.59■■□□□ 1.05
HLA-A-201ENST00000376802 MYCP01106 439 aaPredicted RBP21.59■■□□□ 1.05
HLA-A-201ENST00000376802 PTPRAP18433 802 aa21.59■■□□□ 1.05
HLA-A-201ENST00000376802 PSMC4P43686 418 aa21.59■■□□□ 1.05
HLA-A-201ENST00000376802 RHBDL3P58872 404 aa21.59■■□□□ 1.05
HLA-A-201ENST00000376802 SPTY2D1Q68D10 685 aaPredicted RBP21.59■■□□□ 1.05
HLA-A-201ENST00000376802 SCYL3Q8IZE3 742 aa21.59■■□□□ 1.05
HLA-A-201ENST00000376802 HMG20BQ9P0W2 317 aa21.59■■□□□ 1.05
HLA-A-201ENST00000376802 ZHX2Q9Y6X8 837 aa21.59■■□□□ 1.05
HLA-A-201ENST00000376802 GPR75-ASB3A0A0A6YYF3 556 aa21.58■■□□□ 1.05
HLA-A-201ENST00000376802 PNMA6EA0A0J9YXQ4 647 aa21.58■■□□□ 1.05
HLA-A-201ENST00000376802 BTDP43251 543 aa21.58■■□□□ 1.05
HLA-A-201ENST00000376802 PRMT2P55345 433 aa21.58■■□□□ 1.05
HLA-A-201ENST00000376802 PI16Q6UXB8 463 aa21.58■■□□□ 1.05
HLA-A-201ENST00000376802 SLF2Q8IX21 1173 aa21.58■■□□□ 1.05
HLA-A-201ENST00000376802 NEUROD6Q96NK8 337 aa21.58■■□□□ 1.05
HLA-A-201ENST00000376802 PCDH10Q9P2E7 1040 aa21.58■■□□□ 1.05
HLA-A-201ENST00000376802 SRRDQ9UH36 339 aa21.58■■□□□ 1.05
HLA-A-201ENST00000376802 AFG3L2Q9Y4W6 797 aa21.58■■□□□ 1.05
HLA-A-201ENST00000376802 IPO8O15397 1037 aaKnown RBP21.57■■□□□ 1.04
HLA-A-201ENST00000376802 CYP2C8P10632 490 aa21.57■■□□□ 1.04
HLA-A-201ENST00000376802 BCRP11274 1271 aa21.57■■□□□ 1.04
HLA-A-201ENST00000376802 SLC4A8Q2Y0W8 1093 aa21.57■■□□□ 1.04
HLA-A-201ENST00000376802 ATF7IPQ6VMQ6 1270 aa21.57■■□□□ 1.04
HLA-A-201ENST00000376802 ZSCAN29Q8IWY8 852 aaPredicted RBP21.57■■□□□ 1.04
HLA-A-201ENST00000376802 A0A0G2JLL6 359 aaPredicted RBP21.56■■□□□ 1.04
HLA-A-201ENST00000376802 GNAI2P04899 355 aa21.56■■□□□ 1.04
HLA-A-201ENST00000376802 OSBPP22059 807 aa21.56■■□□□ 1.04
HLA-A-201ENST00000376802 PICALMQ13492 652 aa21.56■■□□□ 1.04
HLA-A-201ENST00000376802 TBC1D9Q6ZT07 1266 aa21.56■■□□□ 1.04
HLA-A-201ENST00000376802 ERICH6Q7L0X2 663 aa21.56■■□□□ 1.04
HLA-A-201ENST00000376802 PRRT2Q7Z6L0 340 aaPredicted RBP21.56■■□□□ 1.04
HLA-A-201ENST00000376802 CLUAP1Q96AJ1 413 aa21.56■■□□□ 1.04
HLA-A-201ENST00000376802 PICK1Q9NRD5 415 aa21.56■■□□□ 1.04
HLA-A-201ENST00000376802 CEP290O15078 2479 aa21.56■■□□□ 1.04
HLA-A-201ENST00000376802 CTNND1O60716 968 aaKnown RBP21.55■■□□□ 1.04
HLA-A-201ENST00000376802 NPM3O75607 178 aaKnown RBP21.55■■□□□ 1.04
HLA-A-201ENST00000376802 ARID4AP29374 1257 aaPredicted RBP21.55■■□□□ 1.04
HLA-A-201ENST00000376802 SPATA5Q8NB90 893 aa21.55■■□□□ 1.04
HLA-A-201ENST00000376802 FRAT1Q92837 279 aaPredicted RBP21.55■■□□□ 1.04
HLA-A-201ENST00000376802 NSUN4Q96CB9 384 aaKnown RBP21.55■■□□□ 1.04
HLA-A-201ENST00000376802 GCC1Q96CN9 775 aa21.55■■□□□ 1.04
HLA-A-201ENST00000376802 MTFR1Q15390 333 aa21.55■■□□□ 1.04
HLA-A-201ENST00000376802 PARK7Q99497 189 aaKnown RBP21.55■■□□□ 1.04
HLA-A-201ENST00000376802 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.55■■□□□ 1.04
HLA-A-201ENST00000376802 TBC1D12O60347 775 aa21.54■■□□□ 1.04
HLA-A-201ENST00000376802 FMNL1O95466 1100 aaPredicted RBP21.54■■□□□ 1.04
HLA-A-201ENST00000376802 HOXD10P28358 340 aa21.54■■□□□ 1.04
HLA-A-201ENST00000376802 MCAMP43121 646 aa21.54■■□□□ 1.04
HLA-A-201ENST00000376802 FASTKD5Q7L8L6 764 aaKnown RBP21.54■■□□□ 1.04
HLA-A-201ENST00000376802 MYO5AQ9Y4I1 1855 aaKnown RBP21.53■■□□□ 1.04
HLA-A-201ENST00000376802 DOCK3Q8IZD9 2030 aa21.53■■□□□ 1.04
HLA-A-201ENST00000376802 ATAD5Q96QE3 1844 aa21.53■■□□□ 1.04
HLA-A-201ENST00000376802 GRK4P32298 578 aa21.53■■□□□ 1.04
HLA-A-201ENST00000376802 HABP4Q5JVS0 413 aaKnown RBP21.53■■□□□ 1.04
HLA-A-201ENST00000376802 GORABQ5T7V8 394 aa21.53■■□□□ 1.04
HLA-A-201ENST00000376802 CCDC84Q86UT8 332 aaPredicted RBP21.53■■□□□ 1.04
HLA-A-201ENST00000376802 MYPNQ86TC9 1320 aa21.52■■□□□ 1.04
HLA-A-201ENST00000376802 FAM196BA6NMK8 535 aa21.52■■□□□ 1.03
HLA-A-201ENST00000376802 G3BP1Q13283 466 aaKnown RBP eCLIP21.52■■□□□ 1.03
HLA-A-201ENST00000376802 GADL1Q6ZQY3 521 aa21.52■■□□□ 1.03
HLA-A-201ENST00000376802 SHISA4Q96DD7 197 aa21.52■■□□□ 1.03
HLA-A-201ENST00000376802 SLC45A1Q9Y2W3 748 aa21.52■■□□□ 1.03
HLA-A-201ENST00000376802 CDK5RAP2Q96SN8 1893 aa21.51■■□□□ 1.03
HLA-A-201ENST00000376802 COL2A1P02458 1487 aaPredicted RBP21.51■■□□□ 1.03
HLA-A-201ENST00000376802 TRIM75PA6NK02 468 aa21.51■■□□□ 1.03
HLA-A-201ENST00000376802 MAP4K4O95819 1239 aaPredicted RBP21.51■■□□□ 1.03
HLA-A-201ENST00000376802 LDHCP07864 332 aa21.51■■□□□ 1.03
HLA-A-201ENST00000376802 GSTO1P78417 241 aa21.51■■□□□ 1.03
HLA-A-201ENST00000376802 PRKCZQ05513 592 aa21.51■■□□□ 1.03
HLA-A-201ENST00000376802 POLA2Q14181 598 aa21.51■■□□□ 1.03
HLA-A-201ENST00000376802 TMEM57Q8N5G2 664 aa21.51■■□□□ 1.03
HLA-A-201ENST00000376802 RAET1EQ8TD07 263 aa21.51■■□□□ 1.03
HLA-A-201ENST00000376802 SIPA1L1O43166 1804 aa21.5■■□□□ 1.03
HLA-A-201ENST00000376802 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.5■■□□□ 1.03
HLA-A-201ENST00000376802 RAI14Q9P0K7 980 aa21.5■■□□□ 1.03
HLA-A-201ENST00000376802 GABRQQ9UN88 632 aa21.5■■□□□ 1.03
HLA-A-201ENST00000376802 FCGRTP55899 365 aa21.49■■□□□ 1.03
HLA-A-201ENST00000376802 RRP1BQ14684 758 aaKnown RBP21.49■■□□□ 1.03
HLA-A-201ENST00000376802 OSBPL5Q9H0X9 879 aaPredicted RBP21.49■■□□□ 1.03
HLA-A-201ENST00000376802 LOC285556D6RIA3 1793 aa21.48■■□□□ 1.03
HLA-A-201ENST00000376802 FOCADQ5VW36 1801 aa21.48■■□□□ 1.03
HLA-A-201ENST00000376802 UQCRFS1P1P0C7P4 283 aa21.48■■□□□ 1.03
HLA-A-201ENST00000376802 CCL5P13501 91 aa21.48■■□□□ 1.03
HLA-A-201ENST00000376802 ZKSCAN2Q63HK3 967 aa21.48■■□□□ 1.03
HLA-A-201ENST00000376802 SSH3Q8TE77 659 aa21.48■■□□□ 1.03
HLA-A-201ENST00000376802 GPR108Q9NPR9 543 aa21.48■■□□□ 1.03
HLA-A-201ENST00000376802 SNRKQ9NRH2 765 aa21.48■■□□□ 1.03
HLA-A-201ENST00000376802 LRP2BPQ9P2M1 347 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms