RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 PPP1R21Q6ZMI0 780 aa19.28■□□□□ 0.68
MCF2L-203ENST00000375604 MICALCLQ6ZW33 695 aa19.28■□□□□ 0.68
MCF2L-203ENST00000375604 CCDC65Q8IXS2 484 aa19.28■□□□□ 0.68
MCF2L-203ENST00000375604 BCS1LQ9Y276 419 aa19.28■□□□□ 0.68
MCF2L-203ENST00000375604 KIF4AO95239 1232 aa19.28■□□□□ 0.68
MCF2L-203ENST00000375604 KCNK9Q9NPC2 374 aa19.28■□□□□ 0.68
MCF2L-203ENST00000375604 JAK2O60674 1132 aa19.27■□□□□ 0.68
MCF2L-203ENST00000375604 AGTPBP1Q9UPW5 1226 aa19.27■□□□□ 0.68
MCF2L-203ENST00000375604 ZFYVE9O95405 1425 aa19.27■□□□□ 0.68
MCF2L-203ENST00000375604 NSMFQ6X4W1 530 aa19.27■□□□□ 0.68
MCF2L-203ENST00000375604 EPB41P11171 864 aaKnown RBP19.27■□□□□ 0.68
MCF2L-203ENST00000375604 PPP2R5DQ14738 602 aa19.27■□□□□ 0.68
MCF2L-203ENST00000375604 IPO4Q8TEX9 1081 aaKnown RBP19.27■□□□□ 0.68
MCF2L-203ENST00000375604 SF3A3Q12874 501 aaKnown RBP eCLIP19.27■□□□□ 0.679e-7■■■■■ 32.4
MCF2L-203ENST00000375604 TRAF1Q13077 416 aa19.27■□□□□ 0.67
MCF2L-203ENST00000375604 ZNF496Q96IT1 587 aaPredicted RBP19.27■□□□□ 0.67
MCF2L-203ENST00000375604 VPS54Q9P1Q0 977 aa19.27■□□□□ 0.67
MCF2L-203ENST00000375604 GYG1P46976 350 aa19.26■□□□□ 0.67
MCF2L-203ENST00000375604 BEND3Q5T5X7 828 aa19.26■□□□□ 0.67
MCF2L-203ENST00000375604 IQUBQ8NA54 791 aa19.26■□□□□ 0.67
MCF2L-203ENST00000375604 SNX21Q969T3 373 aa19.26■□□□□ 0.67
MCF2L-203ENST00000375604 RDH13Q8NBN7 331 aa19.26■□□□□ 0.67
MCF2L-203ENST00000375604 PAGR1Q9BTK6 254 aa19.26■□□□□ 0.67
MCF2L-203ENST00000375604 RSPH14Q9UHP6 348 aa19.26■□□□□ 0.67
MCF2L-203ENST00000375604 UBLCP1Q8WVY7 318 aaPredicted RBP19.26■□□□□ 0.67
MCF2L-203ENST00000375604 ATRIPQ8WXE1 791 aa19.26■□□□□ 0.67
MCF2L-203ENST00000375604 BRAPQ7Z569 592 aa19.26■□□□□ 0.67
MCF2L-203ENST00000375604 SDR42E1Q8WUS8 393 aa19.26■□□□□ 0.67
MCF2L-203ENST00000375604 PPIP5K2O43314 1243 aa19.26■□□□□ 0.67
MCF2L-203ENST00000375604 KRT19P08727 400 aa19.26■□□□□ 0.67
MCF2L-203ENST00000375604 BBXQ8WY36 941 aaPredicted RBP19.26■□□□□ 0.67
MCF2L-203ENST00000375604 LRMPQ12912 555 aa19.26■□□□□ 0.67
MCF2L-203ENST00000375604 PLVAPQ9BX97 442 aa19.26■□□□□ 0.67
MCF2L-203ENST00000375604 C17orf53Q8N3J3 647 aaPredicted RBP19.25■□□□□ 0.67
MCF2L-203ENST00000375604 PSMB7Q99436 277 aa19.25■□□□□ 0.67
MCF2L-203ENST00000375604 SBNO1A3KN83 1393 aa19.25■□□□□ 0.67
MCF2L-203ENST00000375604 GADD45BO75293 160 aaPredicted RBP19.25■□□□□ 0.67
MCF2L-203ENST00000375604 SLC1A4P43007 532 aa19.25■□□□□ 0.67
MCF2L-203ENST00000375604 LEO1Q8WVC0 666 aaPredicted RBP19.25■□□□□ 0.67
MCF2L-203ENST00000375604 SEC62Q99442 399 aaKnown RBP19.25■□□□□ 0.67
MCF2L-203ENST00000375604 USTQ9Y2C2 406 aa19.25■□□□□ 0.67
MCF2L-203ENST00000375604 USP40Q9NVE5 1235 aa19.25■□□□□ 0.67
MCF2L-203ENST00000375604 KIF21AQ7Z4S6 1674 aa19.25■□□□□ 0.67
MCF2L-203ENST00000375604 IGSF3O75054 1194 aa19.25■□□□□ 0.67
MCF2L-203ENST00000375604 DEXIO95424 95 aa19.25■□□□□ 0.67
MCF2L-203ENST00000375604 KRT83P78385 493 aa19.25■□□□□ 0.67
MCF2L-203ENST00000375604 B4DLN1 442 aa19.25■□□□□ 0.67
MCF2L-203ENST00000375604 NDC80O14777 642 aa19.25■□□□□ 0.67
MCF2L-203ENST00000375604 CSPG5O95196 566 aa19.25■□□□□ 0.67
MCF2L-203ENST00000375604 MRPL12P52815 198 aaKnown RBP19.25■□□□□ 0.67
MCF2L-203ENST00000375604 WDR44Q5JSH3 913 aa19.25■□□□□ 0.67
MCF2L-203ENST00000375604 TTLL7Q6ZT98 887 aa19.25■□□□□ 0.67
MCF2L-203ENST00000375604 CDC37L1Q7L3B6 337 aa19.25■□□□□ 0.67
MCF2L-203ENST00000375604 GPATCH11Q8N954 259 aa19.25■□□□□ 0.67
MCF2L-203ENST00000375604 ELP1O95163 1332 aa19.24■□□□□ 0.67
MCF2L-203ENST00000375604 KRT86O43790 486 aa19.24■□□□□ 0.67
MCF2L-203ENST00000375604 GOLGA8HP0CJ92 632 aa19.24■□□□□ 0.67
MCF2L-203ENST00000375604 ZEB2O60315 1214 aa19.24■□□□□ 0.67
MCF2L-203ENST00000375604 ERCC5P28715 1186 aaPredicted RBP19.24■□□□□ 0.67
MCF2L-203ENST00000375604 PSMC4P43686 418 aa19.24■□□□□ 0.67
MCF2L-203ENST00000375604 BCAMP50895 628 aa19.24■□□□□ 0.67
MCF2L-203ENST00000375604 SPAG1Q07617 926 aa19.24■□□□□ 0.67
MCF2L-203ENST00000375604 GCKRQ14397 625 aa19.24■□□□□ 0.67
MCF2L-203ENST00000375604 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.24■□□□□ 0.679e-7■■■■□ 20.7
MCF2L-203ENST00000375604 CEP83Q9Y592 693 aa19.24■□□□□ 0.67
MCF2L-203ENST00000375604 ABCC10Q5T3U5 1492 aa19.24■□□□□ 0.67
MCF2L-203ENST00000375604 COL17A1Q9UMD9 1497 aaPredicted RBP19.24■□□□□ 0.67
MCF2L-203ENST00000375604 BMS1Q14692 1282 aaKnown RBP19.24■□□□□ 0.67
MCF2L-203ENST00000375604 SPECC1LQ69YQ0 1117 aa19.24■□□□□ 0.67
MCF2L-203ENST00000375604 VPS18Q9P253 973 aa19.24■□□□□ 0.67
MCF2L-203ENST00000375604 CCDC122Q5T0U0 273 aa19.24■□□□□ 0.67
MCF2L-203ENST00000375604 ANO1Q5XXA6 986 aa19.24■□□□□ 0.67
MCF2L-203ENST00000375604 MYCT1Q8N699 235 aa19.24■□□□□ 0.67
MCF2L-203ENST00000375604 TRIM6Q9C030 488 aaPredicted RBP19.24■□□□□ 0.67
MCF2L-203ENST00000375604 PARP10Q53GL7 1025 aa19.24■□□□□ 0.67
MCF2L-203ENST00000375604 GPHNQ9NQX3 736 aaPredicted RBP19.24■□□□□ 0.67
MCF2L-203ENST00000375604 STRN3Q13033 797 aa19.23■□□□□ 0.67
MCF2L-203ENST00000375604 LUC7L2Q9Y383 392 aaKnown RBP19.23■□□□□ 0.67
MCF2L-203ENST00000375604 TFAP4Q01664 338 aa19.23■□□□□ 0.67
MCF2L-203ENST00000375604 TTC38Q5R3I4 469 aa19.23■□□□□ 0.67
MCF2L-203ENST00000375604 NUP160Q12769 1436 aa19.23■□□□□ 0.67
MCF2L-203ENST00000375604 APPBP2Q92624 585 aa19.23■□□□□ 0.67
MCF2L-203ENST00000375604 KCNH3Q9ULD8 1083 aa19.23■□□□□ 0.67
MCF2L-203ENST00000375604 PTPROQ16827 1216 aa19.23■□□□□ 0.67
MCF2L-203ENST00000375604 LPIN2Q92539 896 aa19.23■□□□□ 0.67
MCF2L-203ENST00000375604 RABEP2Q9H5N1 569 aa19.23■□□□□ 0.67
MCF2L-203ENST00000375604 GCNT3O95395 438 aa19.22■□□□□ 0.67
MCF2L-203ENST00000375604 TRMT44Q8IYL2 757 aaKnown RBP19.22■□□□□ 0.67
MCF2L-203ENST00000375604 SLAIN2Q9P270 581 aa19.22■□□□□ 0.67
MCF2L-203ENST00000375604 ADCY7P51828 1080 aa19.22■□□□□ 0.67
MCF2L-203ENST00000375604 SNX29Q8TEQ0 813 aa19.22■□□□□ 0.67
MCF2L-203ENST00000375604 LMBR1Q8WVP7 490 aa19.22■□□□□ 0.67
MCF2L-203ENST00000375604 GOLGA1Q92805 767 aa19.22■□□□□ 0.67
MCF2L-203ENST00000375604 TRIM31Q9BZY9 425 aa19.22■□□□□ 0.67
MCF2L-203ENST00000375604 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.22■□□□□ 0.67
MCF2L-203ENST00000375604 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.22■□□□□ 0.67
MCF2L-203ENST00000375604 ARHGEF35A5YM69 484 aa19.22■□□□□ 0.67
MCF2L-203ENST00000375604 PPP2R5CQ13362 524 aa19.22■□□□□ 0.67
MCF2L-203ENST00000375604 DIS3L2Q8IYB7 885 aaKnown RBP19.22■□□□□ 0.67
MCF2L-203ENST00000375604 PPANQ9NQ55 473 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms