RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 KCNG1Q9UIX4 513 aa9.31□□□□□ -0.92
HSPG2-203ENST00000374695 SLC12A2P55011 1212 aa9.31□□□□□ -0.92
HSPG2-203ENST00000374695 ARHGAP4P98171 946 aa9.31□□□□□ -0.92
HSPG2-203ENST00000374695 FAM160A1Q05DH4 1040 aa9.31□□□□□ -0.92
HSPG2-203ENST00000374695 CCDC124Q96CT7 223 aaKnown RBP9.31□□□□□ -0.92
HSPG2-203ENST00000374695 MYL5Q02045 173 aa9.31□□□□□ -0.92
HSPG2-203ENST00000374695 DBN1Q16643 649 aa9.31□□□□□ -0.92
HSPG2-203ENST00000374695 CFAP43Q8NDM7 1665 aa9.31□□□□□ -0.92
HSPG2-203ENST00000374695 ARHGAP45Q92619 1136 aa9.31□□□□□ -0.92
HSPG2-203ENST00000374695 SMC5Q8IY18 1101 aa9.3□□□□□ -0.92
HSPG2-203ENST00000374695 NSMCE1Q8WV22 266 aa9.3□□□□□ -0.92
HSPG2-203ENST00000374695 XAB2Q9HCS7 855 aaKnown RBP9.3□□□□□ -0.92
HSPG2-203ENST00000374695 NAIPQ13075 1403 aa9.3□□□□□ -0.92
HSPG2-203ENST00000374695 TNFAIP3P21580 790 aa9.3□□□□□ -0.92
HSPG2-203ENST00000374695 TXNDC9O14530 226 aa9.3□□□□□ -0.92
HSPG2-203ENST00000374695 MARCKSP29966 332 aaPredicted RBP9.3□□□□□ -0.92
HSPG2-203ENST00000374695 PAXIP1Q6ZW49 1069 aaPredicted RBP9.3□□□□□ -0.92
HSPG2-203ENST00000374695 HIP1RO75146 1068 aa9.3□□□□□ -0.92
HSPG2-203ENST00000374695 MCM7P33993 719 aa9.3□□□□□ -0.92
HSPG2-203ENST00000374695 LLPHQ9BRT6 129 aaKnown RBP9.3□□□□□ -0.92
HSPG2-203ENST00000374695 HAND2P61296 217 aa9.3□□□□□ -0.92
HSPG2-203ENST00000374695 PSPC1Q8WXF1 523 aaKnown RBP9.3□□□□□ -0.92
HSPG2-203ENST00000374695 TROVE2P10155 538 aaKnown RBP eCLIP9.3□□□□□ -0.92
HSPG2-203ENST00000374695 KIF11P52732 1056 aa9.3□□□□□ -0.92
HSPG2-203ENST00000374695 SV2BQ7L1I2 683 aa9.3□□□□□ -0.92
HSPG2-203ENST00000374695 C6orf229H3BNL8 230 aa9.3□□□□□ -0.92
HSPG2-203ENST00000374695 ORC6Q9Y5N6 252 aa9.3□□□□□ -0.92
HSPG2-203ENST00000374695 ANKRD36BQ8N2N9 1353 aa9.3□□□□□ -0.92
HSPG2-203ENST00000374695 ZNF644Q9H582 1327 aaPredicted RBP9.3□□□□□ -0.92
HSPG2-203ENST00000374695 KRT5P13647 590 aa9.3□□□□□ -0.92
HSPG2-203ENST00000374695 SLC9C1Q4G0N8 1177 aa9.3□□□□□ -0.92
HSPG2-203ENST00000374695 PNMA8AQ86V59 439 aaPredicted RBP9.3□□□□□ -0.92
HSPG2-203ENST00000374695 ASIC2Q16515 512 aa9.3□□□□□ -0.92
HSPG2-203ENST00000374695 ZNF804AQ7Z570 1209 aa9.3□□□□□ -0.92
HSPG2-203ENST00000374695 TTC16Q8NEE8 873 aa9.3□□□□□ -0.92
HSPG2-203ENST00000374695 GABPAQ06546 454 aa9.3□□□□□ -0.92
HSPG2-203ENST00000374695 HAUS1Q96CS2 278 aa9.3□□□□□ -0.92
HSPG2-203ENST00000374695 KLHL14Q9P2G3 628 aa9.3□□□□□ -0.92
HSPG2-203ENST00000374695 ATP6V1E1P36543 226 aa9.29□□□□□ -0.92
HSPG2-203ENST00000374695 ZNF445P59923 1031 aa9.29□□□□□ -0.92
HSPG2-203ENST00000374695 SECISBP2LQ93073 1101 aaKnown RBP9.29□□□□□ -0.92
HSPG2-203ENST00000374695 FNBP1Q96RU3 617 aa9.29□□□□□ -0.92
HSPG2-203ENST00000374695 THOC2Q8NI27 1593 aaKnown RBP9.29□□□□□ -0.92
HSPG2-203ENST00000374695 OPHN1O60890 802 aa9.29□□□□□ -0.92
HSPG2-203ENST00000374695 DKC1O60832 514 aaKnown RBP eCLIP9.29□□□□□ -0.92
HSPG2-203ENST00000374695 CCT6AP40227 531 aaKnown RBP9.29□□□□□ -0.92
HSPG2-203ENST00000374695 RBSNQ9H1K0 784 aa9.29□□□□□ -0.92
HSPG2-203ENST00000374695 BAG5Q9UL15 447 aa9.29□□□□□ -0.92
HSPG2-203ENST00000374695 GCKP35557 465 aa9.29□□□□□ -0.92
HSPG2-203ENST00000374695 YWHAEP62258 255 aaKnown RBP9.29□□□□□ -0.92
HSPG2-203ENST00000374695 PLCB4Q15147 1175 aa9.29□□□□□ -0.92
HSPG2-203ENST00000374695 CABS1Q96KC9 395 aa9.29□□□□□ -0.92
HSPG2-203ENST00000374695 FAF1Q9UNN5 650 aaPredicted RBP9.29□□□□□ -0.92
HSPG2-203ENST00000374695 CTNND2Q9UQB3 1225 aa9.29□□□□□ -0.92
HSPG2-203ENST00000374695 CEP104O60308 925 aa9.29□□□□□ -0.92
HSPG2-203ENST00000374695 PSMD6Q15008 389 aa9.29□□□□□ -0.92
HSPG2-203ENST00000374695 BRF1Q92994 677 aa9.29□□□□□ -0.92
HSPG2-203ENST00000374695 GNA14O95837 355 aa9.29□□□□□ -0.92
HSPG2-203ENST00000374695 DNM1Q05193 864 aaKnown RBP9.29□□□□□ -0.92
HSPG2-203ENST00000374695 RPS6KA2Q15349 733 aa9.29□□□□□ -0.92
HSPG2-203ENST00000374695 TMTC1Q8IUR5 882 aa9.29□□□□□ -0.92
HSPG2-203ENST00000374695 PPP1R9AQ9ULJ8 1098 aa9.29□□□□□ -0.92
HSPG2-203ENST00000374695 BCRP11274 1271 aa9.29□□□□□ -0.92
HSPG2-203ENST00000374695 ZC3H15Q8WU90 426 aaKnown RBP9.29□□□□□ -0.92
HSPG2-203ENST00000374695 KARSQ15046 597 aaKnown RBP9.29□□□□□ -0.92
HSPG2-203ENST00000374695 BRD3Q15059 726 aa9.29□□□□□ -0.92
HSPG2-203ENST00000374695 PFDN6O15212 129 aa9.29□□□□□ -0.92
HSPG2-203ENST00000374695 PRIM1P49642 420 aaKnown RBP9.29□□□□□ -0.92
HSPG2-203ENST00000374695 DPH6Q7L8W6 267 aa9.29□□□□□ -0.92
HSPG2-203ENST00000374695 MYH7P12883 1935 aa9.29□□□□□ -0.92
HSPG2-203ENST00000374695 SDSP20132 328 aa9.29□□□□□ -0.92
HSPG2-203ENST00000374695 NAA16Q6N069 864 aaPredicted RBP9.29□□□□□ -0.92
HSPG2-203ENST00000374695 ARMC9Q7Z3E5 817 aa9.29□□□□□ -0.92
HSPG2-203ENST00000374695 ESYT1Q9BSJ8 1104 aa9.29□□□□□ -0.92
HSPG2-203ENST00000374695 ZNF277Q9NRM2 450 aaPredicted RBP9.29□□□□□ -0.92
HSPG2-203ENST00000374695 RASEFQ8IZ41 740 aa9.28□□□□□ -0.92
HSPG2-203ENST00000374695 ZNF710Q8N1W2 664 aa9.28□□□□□ -0.92
HSPG2-203ENST00000374695 SNCBQ16143 134 aa9.28□□□□□ -0.92
HSPG2-203ENST00000374695 LDHAL6AQ6ZMR3 332 aa9.28□□□□□ -0.92
HSPG2-203ENST00000374695 RGS16O15492 202 aaPredicted RBP9.28□□□□□ -0.92
HSPG2-203ENST00000374695 RAPGEF1Q13905 1077 aa9.28□□□□□ -0.92
HSPG2-203ENST00000374695 SLC4A4Q9Y6R1 1079 aa9.28□□□□□ -0.92
HSPG2-203ENST00000374695 GOLGA8KD6RF30 607 aa9.28□□□□□ -0.92
HSPG2-203ENST00000374695 DEUP1Q05D60 604 aa9.28□□□□□ -0.92
HSPG2-203ENST00000374695 ASIC3Q9UHC3 531 aa9.28□□□□□ -0.92
HSPG2-203ENST00000374695 NOC4LQ9BVI4 516 aaKnown RBP9.28□□□□□ -0.92
HSPG2-203ENST00000374695 HSP90AA4PQ58FG1 418 aa9.28□□□□□ -0.92
HSPG2-203ENST00000374695 TRAF5O00463 557 aa9.28□□□□□ -0.92
HSPG2-203ENST00000374695 MICAL1Q8TDZ2 1067 aa9.28□□□□□ -0.92
HSPG2-203ENST00000374695 SMIM24O75264 130 aa9.28□□□□□ -0.92
HSPG2-203ENST00000374695 IPO11Q9UI26 975 aaKnown RBP9.28□□□□□ -0.92
HSPG2-203ENST00000374695 AFG3L2Q9Y4W6 797 aa9.28□□□□□ -0.92
HSPG2-203ENST00000374695 GCC2Q8IWJ2 1684 aa9.28□□□□□ -0.92
HSPG2-203ENST00000374695 AQRO60306 1485 aaKnown RBP eCLIP9.28□□□□□ -0.924e-7■■■■■ 32.4
HSPG2-203ENST00000374695 RILPQ96NA2 401 aa9.28□□□□□ -0.92
HSPG2-203ENST00000374695 DAPK3O43293 454 aa9.28□□□□□ -0.92
HSPG2-203ENST00000374695 IFT140Q96RY7 1462 aa9.28□□□□□ -0.92
HSPG2-203ENST00000374695 P4HA1P13674 534 aa9.28□□□□□ -0.92
HSPG2-203ENST00000374695 ESRRGP62508 458 aa9.28□□□□□ -0.92
HSPG2-203ENST00000374695 GRK7Q8WTQ7 553 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms