RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 PPARAQ07869 468 aa18.59■□□□□ 0.57
CNKSR1-202ENST00000374253 UBE4AQ14139 1066 aa18.59■□□□□ 0.57
CNKSR1-202ENST00000374253 TXNRD3Q86VQ6 643 aa18.59■□□□□ 0.57
CNKSR1-202ENST00000374253 ENGASEQ8NFI3 743 aa18.59■□□□□ 0.57
CNKSR1-202ENST00000374253 PNPLA7Q6ZV29 1317 aa18.59■□□□□ 0.57
CNKSR1-202ENST00000374253 LAMB2P55268 1798 aa18.59■□□□□ 0.57
CNKSR1-202ENST00000374253 ZNF500O60304 480 aaPredicted RBP18.59■□□□□ 0.57
CNKSR1-202ENST00000374253 FAM160A1Q05DH4 1040 aa18.59■□□□□ 0.57
CNKSR1-202ENST00000374253 RTCBQ9Y3I0 505 aaKnown RBP18.59■□□□□ 0.57
CNKSR1-202ENST00000374253 CHD4Q14839 1912 aa18.59■□□□□ 0.57
CNKSR1-202ENST00000374253 SPTLC2O15270 562 aa18.58■□□□□ 0.57
CNKSR1-202ENST00000374253 MRPS27Q92552 414 aaKnown RBP18.58■□□□□ 0.57
CNKSR1-202ENST00000374253 KRT23Q9C075 422 aa18.58■□□□□ 0.57
CNKSR1-202ENST00000374253 CICQ96RK0 1608 aaPredicted RBP18.58■□□□□ 0.56
CNKSR1-202ENST00000374253 GNAT2P19087 354 aa18.58■□□□□ 0.56
CNKSR1-202ENST00000374253 WTAPQ15007 396 aa18.58■□□□□ 0.56
CNKSR1-202ENST00000374253 CPLX2Q6PUV4 134 aaKnown RBP18.58■□□□□ 0.56
CNKSR1-202ENST00000374253 SGMS1Q86VZ5 419 aa18.58■□□□□ 0.56
CNKSR1-202ENST00000374253 STAG1Q8WVM7 1258 aa18.58■□□□□ 0.56
CNKSR1-202ENST00000374253 RIOK1Q9BRS2 568 aaKnown RBP18.57■□□□□ 0.56
CNKSR1-202ENST00000374253 CNNM2Q9H8M5 875 aa18.57■□□□□ 0.56
CNKSR1-202ENST00000374253 R3HCC1Q9Y3T6 440 aaKnown RBP18.57■□□□□ 0.56
CNKSR1-202ENST00000374253 CASZ1Q86V15 1759 aa18.57■□□□□ 0.56
CNKSR1-202ENST00000374253 OFD1O75665 1012 aa18.57■□□□□ 0.56
CNKSR1-202ENST00000374253 CDKL5O76039 1030 aa18.57■□□□□ 0.56
CNKSR1-202ENST00000374253 ANO1Q5XXA6 986 aa18.57■□□□□ 0.56
CNKSR1-202ENST00000374253 ATL3Q6DD88 541 aa18.57■□□□□ 0.56
CNKSR1-202ENST00000374253 FNBP4Q8N3X1 1017 aaPredicted RBP18.57■□□□□ 0.56
CNKSR1-202ENST00000374253 KCNJ14Q9UNX9 436 aa18.57■□□□□ 0.56
CNKSR1-202ENST00000374253 LIFRP42702 1097 aa18.56■□□□□ 0.56
CNKSR1-202ENST00000374253 ADALQ6DHV7 355 aa18.56■□□□□ 0.56
CNKSR1-202ENST00000374253 BRAPQ7Z569 592 aa18.56■□□□□ 0.56
CNKSR1-202ENST00000374253 SDF4Q9BRK5 362 aa18.56■□□□□ 0.56
CNKSR1-202ENST00000374253 BTAF1O14981 1849 aa18.56■□□□□ 0.56
CNKSR1-202ENST00000374253 BAZ2AQ9UIF9 1905 aaKnown RBP18.56■□□□□ 0.56
CNKSR1-202ENST00000374253 hCG_1642624A0A1W2PR95 340 aa18.56■□□□□ 0.56
CNKSR1-202ENST00000374253 WDHD1O75717 1129 aaPredicted RBP18.56■□□□□ 0.56
CNKSR1-202ENST00000374253 PRDX5P30044 214 aa18.56■□□□□ 0.56
CNKSR1-202ENST00000374253 SLC10A5Q5PT55 438 aa18.56■□□□□ 0.56
CNKSR1-202ENST00000374253 TPTE2Q6XPS3 522 aa18.56■□□□□ 0.56
CNKSR1-202ENST00000374253 FMR1NBQ8N0W7 255 aaPredicted RBP18.56■□□□□ 0.56
CNKSR1-202ENST00000374253 GPR101Q96P66 508 aaPredicted RBP18.56■□□□□ 0.56
CNKSR1-202ENST00000374253 POLR3EQ9NVU0 708 aa18.56■□□□□ 0.56
CNKSR1-202ENST00000374253 AATFQ9NY61 560 aaKnown RBP eCLIP18.56■□□□□ 0.56
CNKSR1-202ENST00000374253 SSRP1Q08945 709 aaKnown RBP18.55■□□□□ 0.56
CNKSR1-202ENST00000374253 TRIM5Q9C035 493 aa18.55■□□□□ 0.56
CNKSR1-202ENST00000374253 NYXQ9GZU5 481 aa18.55■□□□□ 0.56
CNKSR1-202ENST00000374253 ERICH2A1L162 156 aa18.55■□□□□ 0.56
CNKSR1-202ENST00000374253 RTN1Q16799 776 aa18.55■□□□□ 0.56
CNKSR1-202ENST00000374253 UBAC1Q9BSL1 405 aa18.55■□□□□ 0.56
CNKSR1-202ENST00000374253 MROH7-TTC4A0A0A0MT08 1334 aa18.54■□□□□ 0.56
CNKSR1-202ENST00000374253 RFC4P35249 363 aa18.54■□□□□ 0.56
CNKSR1-202ENST00000374253 MECOMQ03112 1051 aa18.54■□□□□ 0.56
CNKSR1-202ENST00000374253 KIAA2012Q0VF49 1180 aa18.54■□□□□ 0.56
CNKSR1-202ENST00000374253 TRIM29Q14134 588 aa18.54■□□□□ 0.56
CNKSR1-202ENST00000374253 SART3Q15020 963 aaKnown RBP18.54■□□□□ 0.56
CNKSR1-202ENST00000374253 MEX3CQ5U5Q3 659 aaKnown RBP18.54■□□□□ 0.56
CNKSR1-202ENST00000374253 FAM196AQ6ZSG2 479 aa18.54■□□□□ 0.56
CNKSR1-202ENST00000374253 DRC7Q8IY82 874 aa18.54■□□□□ 0.56
CNKSR1-202ENST00000374253 KCNG4Q8TDN1 519 aa18.54■□□□□ 0.56
CNKSR1-202ENST00000374253 NRBP1Q9UHY1 535 aa18.54■□□□□ 0.56
CNKSR1-202ENST00000374253 TNKSO95271 1327 aa18.54■□□□□ 0.56
CNKSR1-202ENST00000374253 BIN1O00499 593 aa18.54■□□□□ 0.56
CNKSR1-202ENST00000374253 HIBADHP31937 336 aaKnown RBP18.54■□□□□ 0.56
CNKSR1-202ENST00000374253 FBXO33Q7Z6M2 555 aa18.54■□□□□ 0.56
CNKSR1-202ENST00000374253 CLIC6Q96NY7 704 aa18.54■□□□□ 0.56
CNKSR1-202ENST00000374253 KCNF1Q9H3M0 494 aa18.54■□□□□ 0.56
CNKSR1-202ENST00000374253 RC3H1Q5TC82 1133 aaKnown RBP18.53■□□□□ 0.56
CNKSR1-202ENST00000374253 ISM2Q6H9L7 571 aa18.53■□□□□ 0.56
CNKSR1-202ENST00000374253 CACNA1SQ13698 1873 aa18.53■□□□□ 0.56
CNKSR1-202ENST00000374253 A0A1B0GUL6 1792 aa18.53■□□□□ 0.56
CNKSR1-202ENST00000374253 BTBD18B2RXH4 712 aa18.53■□□□□ 0.56
CNKSR1-202ENST00000374253 YEATS4O95619 227 aa18.53■□□□□ 0.56
CNKSR1-202ENST00000374253 PTGS1P23219 599 aa18.53■□□□□ 0.56
CNKSR1-202ENST00000374253 AXDND1Q5T1B0 1012 aaPredicted RBP18.53■□□□□ 0.56
CNKSR1-202ENST00000374253 ZNF654Q8IZM8 581 aa18.53■□□□□ 0.56
CNKSR1-202ENST00000374253 NSUN4Q96CB9 384 aaKnown RBP18.53■□□□□ 0.56
CNKSR1-202ENST00000374253 MYH2Q9UKX2 1941 aa18.52■□□□□ 0.56
CNKSR1-202ENST00000374253 USP17L12C9JPN9 530 aa18.52■□□□□ 0.56
CNKSR1-202ENST00000374253 USP17L21D6R901 530 aa18.52■□□□□ 0.56
CNKSR1-202ENST00000374253 ATP2B1P20020 1258 aa18.52■□□□□ 0.56
CNKSR1-202ENST00000374253 TM4SF1P30408 202 aa18.52■□□□□ 0.56
CNKSR1-202ENST00000374253 STX1AQ16623 288 aa18.52■□□□□ 0.56
CNKSR1-202ENST00000374253 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.52■□□□□ 0.56
CNKSR1-202ENST00000374253 SCN7AQ01118 1682 aa18.52■□□□□ 0.56
CNKSR1-202ENST00000374253 ECM29Q5VYK3 1845 aa18.52■□□□□ 0.55
CNKSR1-202ENST00000374253 NMT2O60551 498 aa18.52■□□□□ 0.55
CNKSR1-202ENST00000374253 FMNL1O95466 1100 aaPredicted RBP18.52■□□□□ 0.55
CNKSR1-202ENST00000374253 CYP2D6P10635 497 aa18.52■□□□□ 0.55
CNKSR1-202ENST00000374253 PFKFB1P16118 471 aa18.52■□□□□ 0.55
CNKSR1-202ENST00000374253 SPECC1Q5M775 1068 aa18.52■□□□□ 0.55
CNKSR1-202ENST00000374253 TDRD7Q8NHU6 1098 aaKnown RBP18.52■□□□□ 0.55
CNKSR1-202ENST00000374253 RNF41Q9H4P4 317 aaPredicted RBP18.52■□□□□ 0.55
CNKSR1-202ENST00000374253 LRRC4BQ9NT99 713 aa18.52■□□□□ 0.55
CNKSR1-202ENST00000374253 ANKIB1Q9P2G1 1089 aa18.52■□□□□ 0.55
CNKSR1-202ENST00000374253 PYCARDQ9ULZ3 195 aa18.52■□□□□ 0.55
CNKSR1-202ENST00000374253 NFIXQ14938 502 aa18.51■□□□□ 0.55
CNKSR1-202ENST00000374253 IQCB1Q15051 598 aa18.51■□□□□ 0.55
CNKSR1-202ENST00000374253 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.51■□□□□ 0.55
CNKSR1-202ENST00000374253 BAZ2BQ9UIF8 2168 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms