RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 KCNF1Q9H3M0 494 aa21.77■■□□□ 1.08
USP49-202ENST00000373010 MAGEB6P1A0A0J9YX57 407 aa21.77■■□□□ 1.08
USP49-202ENST00000373010 SMIM22K7EJ46 135 aa21.77■■□□□ 1.08
USP49-202ENST00000373010 STX1AQ16623 288 aa21.77■■□□□ 1.08
USP49-202ENST00000373010 FAM182BQ5T319 152 aa21.77■■□□□ 1.08
USP49-202ENST00000373010 SLC26A6Q9BXS9 759 aa21.77■■□□□ 1.08
USP49-202ENST00000373010 PPARAQ07869 468 aa21.76■■□□□ 1.07
USP49-202ENST00000373010 IQCB1Q15051 598 aa21.76■■□□□ 1.07
USP49-202ENST00000373010 PIBF1Q8WXW3 757 aa21.76■■□□□ 1.07
USP49-202ENST00000373010 FAM84BQ96KN1 310 aaPredicted RBP21.76■■□□□ 1.07
USP49-202ENST00000373010 MINDY4BA8MYZ0 360 aa21.76■■□□□ 1.07
USP49-202ENST00000373010 KLRK1P26718 216 aa21.76■■□□□ 1.07
USP49-202ENST00000373010 CAVIN4Q5BKX8 364 aa21.76■■□□□ 1.07
USP49-202ENST00000373010 SLC10A5Q5PT55 438 aa21.76■■□□□ 1.07
USP49-202ENST00000373010 TRIM5Q9C035 493 aa21.76■■□□□ 1.07
USP49-202ENST00000373010 CACNA1SQ13698 1873 aa21.75■■□□□ 1.07
USP49-202ENST00000373010 WTAPQ15007 396 aa21.75■■□□□ 1.07
USP49-202ENST00000373010 NARFQ9UHQ1 456 aa21.75■■□□□ 1.07
USP49-202ENST00000373010 MARCKSP29966 332 aaPredicted RBP21.75■■□□□ 1.07
USP49-202ENST00000373010 ZNF75DP51815 510 aa21.75■■□□□ 1.07
USP49-202ENST00000373010 DYNLL1P63167 89 aaKnown RBP21.75■■□□□ 1.07
USP49-202ENST00000373010 SDF4Q9BRK5 362 aa21.75■■□□□ 1.07
USP49-202ENST00000373010 GNPATO15228 680 aa21.74■■□□□ 1.07
USP49-202ENST00000373010 CAVIN2O95810 425 aa21.74■■□□□ 1.07
USP49-202ENST00000373010 SSRP1Q08945 709 aaKnown RBP21.74■■□□□ 1.07
USP49-202ENST00000373010 GNL2Q13823 731 aaKnown RBP21.74■■□□□ 1.07
USP49-202ENST00000373010 AXDND1Q5T1B0 1012 aaPredicted RBP21.74■■□□□ 1.07
USP49-202ENST00000373010 RGS22Q8NE09 1264 aa21.74■■□□□ 1.07
USP49-202ENST00000373010 FBXW7Q969H0 707 aa21.74■■□□□ 1.07
USP49-202ENST00000373010 RIOK1Q9BRS2 568 aaKnown RBP21.74■■□□□ 1.07
USP49-202ENST00000373010 BTAF1O14981 1849 aa21.74■■□□□ 1.07
USP49-202ENST00000373010 RPS6KA4O75676 772 aa21.74■■□□□ 1.07
USP49-202ENST00000373010 WDHD1O75717 1129 aaPredicted RBP21.74■■□□□ 1.07
USP49-202ENST00000373010 NOLC1Q14978 699 aaKnown RBP eCLIP21.74■■□□□ 1.07
USP49-202ENST00000373010 NBPF5PQ86XG9 351 aaPredicted RBP21.74■■□□□ 1.07
USP49-202ENST00000373010 PLA2G4DQ86XP0 818 aa21.74■■□□□ 1.07
USP49-202ENST00000373010 SETDB2Q96T68 719 aa21.74■■□□□ 1.07
USP49-202ENST00000373010 GOLGA6L6A8MZA4 724 aa21.73■■□□□ 1.07
USP49-202ENST00000373010 FMNL1O95466 1100 aaPredicted RBP21.73■■□□□ 1.07
USP49-202ENST00000373010 PTGS1P23219 599 aa21.73■■□□□ 1.07
USP49-202ENST00000373010 GUCY1A2P33402 732 aa21.73■■□□□ 1.07
USP49-202ENST00000373010 SART3Q15020 963 aaKnown RBP21.73■■□□□ 1.07
USP49-202ENST00000373010 AMIGO3Q86WK7 504 aa21.73■■□□□ 1.07
USP49-202ENST00000373010 ZNF384Q8TF68 577 aa21.73■■□□□ 1.07
USP49-202ENST00000373010 BAZ2AQ9UIF9 1905 aaKnown RBP21.73■■□□□ 1.07
USP49-202ENST00000373010 TPM2P07951 284 aa21.72■■□□□ 1.07
USP49-202ENST00000373010 RPS8P62241 208 aaKnown RBP21.72■■□□□ 1.07
USP49-202ENST00000373010 TRIM29Q14134 588 aa21.72■■□□□ 1.07
USP49-202ENST00000373010 SLC39A14Q15043 492 aa21.72■■□□□ 1.07
USP49-202ENST00000373010 RNF41Q9H4P4 317 aaPredicted RBP21.72■■□□□ 1.07
USP49-202ENST00000373010 PYCARDQ9ULZ3 195 aa21.72■■□□□ 1.07
USP49-202ENST00000373010 MROH7-TTC4A0A0A0MT08 1334 aa21.72■■□□□ 1.07
USP49-202ENST00000373010 IFNAR1P17181 557 aa21.72■■□□□ 1.07
USP49-202ENST00000373010 RTN1Q16799 776 aa21.72■■□□□ 1.07
USP49-202ENST00000373010 RC3H1Q5TC82 1133 aaKnown RBP21.72■■□□□ 1.07
USP49-202ENST00000373010 DRC7Q8IY82 874 aa21.72■■□□□ 1.07
USP49-202ENST00000373010 CMTR1Q8N1G2 835 aaKnown RBP21.72■■□□□ 1.07
USP49-202ENST00000373010 CCDC82Q8N4S0 544 aa21.72■■□□□ 1.07
USP49-202ENST00000373010 ANO10Q9NW15 660 aa21.72■■□□□ 1.07
USP49-202ENST00000373010 STK36Q9NRP7 1315 aa21.71■■□□□ 1.07
USP49-202ENST00000373010 CYP2D7A0A087X1C5 515 aa21.71■■□□□ 1.07
USP49-202ENST00000373010 ERICH2A1L162 156 aa21.71■■□□□ 1.07
USP49-202ENST00000373010 GOLGA6L19H0YKK7 550 aa21.71■■□□□ 1.07
USP49-202ENST00000373010 ZPR1O75312 459 aa21.71■■□□□ 1.07
USP49-202ENST00000373010 NLRP3Q96P20 1036 aa21.71■■□□□ 1.07
USP49-202ENST00000373010 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.71■■□□□ 1.07
USP49-202ENST00000373010 NYXQ9GZU5 481 aa21.71■■□□□ 1.07
USP49-202ENST00000373010 NRBP1Q9UHY1 535 aa21.71■■□□□ 1.07
USP49-202ENST00000373010 TPM3P06753 285 aa21.71■■□□□ 1.07
USP49-202ENST00000373010 FBXO33Q7Z6M2 555 aa21.71■■□□□ 1.07
USP49-202ENST00000373010 TFCP2L1Q9NZI6 479 aa21.71■■□□□ 1.07
USP49-202ENST00000373010 NID2Q14112 1375 aa21.71■■□□□ 1.07
USP49-202ENST00000373010 UBAP1LF5GYI3 381 aa21.7■■□□□ 1.06
USP49-202ENST00000373010 PFKFB1P16118 471 aa21.7■■□□□ 1.06
USP49-202ENST00000373010 U2AF2P26368 475 aaKnown RBP eCLIP21.7■■□□□ 1.06
USP49-202ENST00000373010 NUP133Q8WUM0 1156 aa21.7■■□□□ 1.06
USP49-202ENST00000373010 CCNL1Q9UK58 526 aaPredicted RBP21.7■■□□□ 1.06
USP49-202ENST00000373010 MYH2Q9UKX2 1941 aa21.7■■□□□ 1.06
USP49-202ENST00000373010 ZNF202O95125 648 aa21.7■■□□□ 1.06
USP49-202ENST00000373010 CMA1P23946 247 aa21.7■■□□□ 1.06
USP49-202ENST00000373010 PTPAQ15257 358 aa21.7■■□□□ 1.06
USP49-202ENST00000373010 CCDC186Q7Z3E2 898 aa21.7■■□□□ 1.06
USP49-202ENST00000373010 DHX40Q8IX18 779 aaKnown RBP21.7■■□□□ 1.06
USP49-202ENST00000373010 ZNF654Q8IZM8 581 aa21.69■■□□□ 1.06
USP49-202ENST00000373010 MAP3K14Q99558 947 aa21.69■■□□□ 1.06
USP49-202ENST00000373010 UBAC1Q9BSL1 405 aa21.69■■□□□ 1.06
USP49-202ENST00000373010 ANAPC4Q9UJX5 808 aa21.69■■□□□ 1.06
USP49-202ENST00000373010 COL24A1Q17RW2 1714 aa21.69■■□□□ 1.06
USP49-202ENST00000373010 RGL2O15211 777 aa21.69■■□□□ 1.06
USP49-202ENST00000373010 KIAA1468Q9P260 1216 aa21.69■■□□□ 1.06
USP49-202ENST00000373010 KCNJ14Q9UNX9 436 aa21.69■■□□□ 1.06
USP49-202ENST00000373010 BECN2A8MW95 431 aa21.68■■□□□ 1.06
USP49-202ENST00000373010 TERF1P54274 439 aa21.68■■□□□ 1.06
USP49-202ENST00000373010 DNTTIP2Q5QJE6 756 aaKnown RBP21.68■■□□□ 1.06
USP49-202ENST00000373010 NBPF11Q86T75 865 aa21.68■■□□□ 1.06
USP49-202ENST00000373010 KIAA1524Q8TCG1 905 aa21.68■■□□□ 1.06
USP49-202ENST00000373010 MYH13Q9UKX3 1938 aa21.68■■□□□ 1.06
USP49-202ENST00000373010 TNKSO95271 1327 aa21.68■■□□□ 1.06
USP49-202ENST00000373010 CEP57L1Q8IYX8 460 aa21.68■■□□□ 1.06
USP49-202ENST00000373010 FANCBQ8NB91 859 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms