RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 PHKBQ93100 1093 aa20.85■□□□□ 0.93
CTSA-204ENST00000372484 LEMD3Q9Y2U8 911 aa20.85■□□□□ 0.93
CTSA-204ENST00000372484 NR1I2O75469 434 aa20.84■□□□□ 0.93
CTSA-204ENST00000372484 SERPINB2P05120 415 aa20.84■□□□□ 0.93
CTSA-204ENST00000372484 ALG1Q9BT22 464 aa20.84■□□□□ 0.93
CTSA-204ENST00000372484 MTA3Q9BTC8 594 aa20.84■□□□□ 0.93
CTSA-204ENST00000372484 TNMDQ9H2S6 317 aa20.84■□□□□ 0.93
CTSA-204ENST00000372484 JAG2Q9Y219 1238 aa20.84■□□□□ 0.93
CTSA-204ENST00000372484 POLR3DP05423 398 aaPredicted RBP20.84■□□□□ 0.93
CTSA-204ENST00000372484 IARSP41252 1262 aaKnown RBP20.84■□□□□ 0.93
CTSA-204ENST00000372484 NTRK3Q16288 839 aa20.84■□□□□ 0.93
CTSA-204ENST00000372484 SLC51AQ86UW1 340 aa20.84■□□□□ 0.93
CTSA-204ENST00000372484 ESR2Q92731 530 aa20.84■□□□□ 0.93
CTSA-204ENST00000372484 UBAC1Q9BSL1 405 aa20.84■□□□□ 0.93
CTSA-204ENST00000372484 FAM217BQ9NTX9 383 aaPredicted RBP20.84■□□□□ 0.93
CTSA-204ENST00000372484 AATFQ9NY61 560 aaKnown RBP eCLIP20.84■□□□□ 0.93
CTSA-204ENST00000372484 XDHP47989 1333 aa20.84■□□□□ 0.93
CTSA-204ENST00000372484 CCDC192P0DO97 292 aa20.83■□□□□ 0.93
CTSA-204ENST00000372484 AEBP2Q6ZN18 517 aaPredicted RBP20.83■□□□□ 0.93
CTSA-204ENST00000372484 BRAPQ7Z569 592 aa20.83■□□□□ 0.93
CTSA-204ENST00000372484 TMTC2Q8N394 836 aa20.83■□□□□ 0.93
CTSA-204ENST00000372484 RGS22Q8NE09 1264 aa20.83■□□□□ 0.93
CTSA-204ENST00000372484 UVSSAQ2YD98 709 aa20.83■□□□□ 0.92
CTSA-204ENST00000372484 AIFM3Q96NN9 605 aa20.83■□□□□ 0.92
CTSA-204ENST00000372484 MAST2Q6P0Q8 1798 aa20.83■□□□□ 0.92
CTSA-204ENST00000372484 MYH2Q9UKX2 1941 aa20.82■□□□□ 0.92
CTSA-204ENST00000372484 ESPNB1AK53 854 aa20.82■□□□□ 0.92
CTSA-204ENST00000372484 SMIM22K7EJ46 135 aa20.82■□□□□ 0.92
CTSA-204ENST00000372484 CRY2Q49AN0 593 aa20.82■□□□□ 0.92
CTSA-204ENST00000372484 SPTY2D1Q68D10 685 aaPredicted RBP20.82■□□□□ 0.92
CTSA-204ENST00000372484 CRNKL1Q9BZJ0 848 aaKnown RBP20.82■□□□□ 0.92
CTSA-204ENST00000372484 CLSTN2Q9H4D0 955 aa20.82■□□□□ 0.92
CTSA-204ENST00000372484 ECM29Q5VYK3 1845 aa20.82■□□□□ 0.92
CTSA-204ENST00000372484 CYP2D7A0A087X1C5 515 aa20.81■□□□□ 0.92
CTSA-204ENST00000372484 ZBTB22O15209 634 aa20.81■□□□□ 0.92
CTSA-204ENST00000372484 RANBP6O60518 1105 aaKnown RBP20.81■□□□□ 0.92
CTSA-204ENST00000372484 ME1P48163 572 aa20.81■□□□□ 0.92
CTSA-204ENST00000372484 TMED8Q6PL24 325 aaPredicted RBP20.81■□□□□ 0.92
CTSA-204ENST00000372484 DZIP1Q86YF9 867 aaKnown RBP20.81■□□□□ 0.92
CTSA-204ENST00000372484 RTEL1Q9NZ71 1219 aa20.81■□□□□ 0.92
CTSA-204ENST00000372484 KIF23Q02241 960 aaPredicted RBP20.81■□□□□ 0.92
CTSA-204ENST00000372484 CTR9Q6PD62 1173 aa20.81■□□□□ 0.92
CTSA-204ENST00000372484 TAOK2Q9UL54 1235 aa20.81■□□□□ 0.92
CTSA-204ENST00000372484 NID2Q14112 1375 aa20.8■□□□□ 0.92
CTSA-204ENST00000372484 KIF28PB7ZC32 967 aa20.8■□□□□ 0.92
CTSA-204ENST00000372484 SSRP1Q08945 709 aaKnown RBP20.8■□□□□ 0.92
CTSA-204ENST00000372484 MYSM1Q5VVJ2 828 aa20.8■□□□□ 0.92
CTSA-204ENST00000372484 CCAR1Q8IX12 1150 aaKnown RBP20.8■□□□□ 0.92
CTSA-204ENST00000372484 CKAP2LQ8IYA6 745 aa20.8■□□□□ 0.92
CTSA-204ENST00000372484 SLC26A6Q9BXS9 759 aa20.8■□□□□ 0.92
CTSA-204ENST00000372484 DUOX1Q9NRD9 1551 aa20.8■□□□□ 0.92
CTSA-204ENST00000372484 TNKSO95271 1327 aa20.8■□□□□ 0.92
CTSA-204ENST00000372484 USP17L12C9JPN9 530 aa20.8■□□□□ 0.92
CTSA-204ENST00000372484 USP17L21D6R901 530 aa20.8■□□□□ 0.92
CTSA-204ENST00000372484 RTN1Q16799 776 aa20.8■□□□□ 0.92
CTSA-204ENST00000372484 TXNRD1Q16881 649 aa20.8■□□□□ 0.92
CTSA-204ENST00000372484 KRT40Q6A162 431 aa20.8■□□□□ 0.92
CTSA-204ENST00000372484 ZNF804AQ7Z570 1209 aa20.8■□□□□ 0.92
CTSA-204ENST00000372484 WDR66Q8TBY9 1149 aa20.8■□□□□ 0.92
CTSA-204ENST00000372484 RBM17Q96I25 401 aaKnown RBP20.8■□□□□ 0.92
CTSA-204ENST00000372484 STK36Q9NRP7 1315 aa20.79■□□□□ 0.92
CTSA-204ENST00000372484 IFNAR1P17181 557 aa20.79■□□□□ 0.92
CTSA-204ENST00000372484 TRIM29Q14134 588 aa20.79■□□□□ 0.92
CTSA-204ENST00000372484 TDRD7Q8NHU6 1098 aaKnown RBP20.79■□□□□ 0.92
CTSA-204ENST00000372484 DCP1AQ9NPI6 582 aaPredicted RBP20.79■□□□□ 0.92
CTSA-204ENST00000372484 FMNL1O95466 1100 aaPredicted RBP20.78■□□□□ 0.92
CTSA-204ENST00000372484 PCP11498 1178 aaKnown RBP20.78■□□□□ 0.92
CTSA-204ENST00000372484 GPSM2P81274 684 aa20.78■□□□□ 0.92
CTSA-204ENST00000372484 ZNF654Q8IZM8 581 aa20.78■□□□□ 0.92
CTSA-204ENST00000372484 ATP8A2Q9NTI2 1148 aa20.78■□□□□ 0.92
CTSA-204ENST00000372484 POLR3EQ9NVU0 708 aa20.78■□□□□ 0.92
CTSA-204ENST00000372484 CLIC4Q9Y696 253 aa20.78■□□□□ 0.92
CTSA-204ENST00000372484 CCDC196A0A1B0GTZ2 297 aa20.78■□□□□ 0.92
CTSA-204ENST00000372484 LDHBP07195 334 aaKnown RBP20.78■□□□□ 0.92
CTSA-204ENST00000372484 RCAN1P53805 252 aa20.78■□□□□ 0.92
CTSA-204ENST00000372484 DDR1Q08345 913 aa20.78■□□□□ 0.92
CTSA-204ENST00000372484 STK38Q15208 465 aa20.78■□□□□ 0.92
CTSA-204ENST00000372484 SEC23AQ15436 765 aa20.78■□□□□ 0.92
CTSA-204ENST00000372484 CCDC73Q6ZRK6 1079 aa20.78■□□□□ 0.92
CTSA-204ENST00000372484 RBM43Q6ZSC3 357 aaKnown RBP20.78■□□□□ 0.92
CTSA-204ENST00000372484 PROM2Q8N271 834 aa20.78■□□□□ 0.92
CTSA-204ENST00000372484 LINC00301Q8NCQ3 95 aa20.78■□□□□ 0.92
CTSA-204ENST00000372484 NUP133Q8WUM0 1156 aa20.78■□□□□ 0.92
CTSA-204ENST00000372484 GPR101Q96P66 508 aaPredicted RBP20.78■□□□□ 0.92
CTSA-204ENST00000372484 PRDM1O75626 825 aa20.77■□□□□ 0.92
CTSA-204ENST00000372484 TYRO3Q06418 890 aa20.77■□□□□ 0.92
CTSA-204ENST00000372484 GNL2Q13823 731 aaKnown RBP20.77■□□□□ 0.92
CTSA-204ENST00000372484 SF3A1Q15459 793 aaKnown RBP20.77■□□□□ 0.92
CTSA-204ENST00000372484 TRIM22Q8IYM9 498 aa20.77■□□□□ 0.92
CTSA-204ENST00000372484 WASF1Q92558 559 aa20.77■□□□□ 0.92
CTSA-204ENST00000372484 ZSCAN10Q96SZ4 725 aaPredicted RBP20.77■□□□□ 0.92
CTSA-204ENST00000372484 GOLPH3LQ9H4A5 285 aa20.77■□□□□ 0.92
CTSA-204ENST00000372484 PCDHA7Q9UN72 937 aa20.77■□□□□ 0.92
CTSA-204ENST00000372484 KIAA1551Q9HCM1 1747 aa20.77■□□□□ 0.92
CTSA-204ENST00000372484 UFL1O94874 794 aa20.77■□□□□ 0.91
CTSA-204ENST00000372484 YEATS4O95619 227 aa20.77■□□□□ 0.91
CTSA-204ENST00000372484 FGRP09769 529 aa20.77■□□□□ 0.91
CTSA-204ENST00000372484 HS1BP3Q53T59 392 aa20.77■□□□□ 0.91
CTSA-204ENST00000372484 C15orf52Q6ZUT6 534 aaKnown RBP20.77■□□□□ 0.91
CTSA-204ENST00000372484 FANCBQ8NB91 859 aa20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 207.3 ms