RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 ZNF341Q9BYN7 854 aa24.38■■□□□ 1.49
TMEM53-205ENST00000372244 TSKSQ9UJT2 592 aa24.38■■□□□ 1.49
TMEM53-205ENST00000372244 ATRNL1Q5VV63 1379 aa24.38■■□□□ 1.49
TMEM53-205ENST00000372244 TRPA1O75762 1119 aa24.38■■□□□ 1.49
TMEM53-205ENST00000372244 PLCG2P16885 1265 aa24.38■■□□□ 1.49
TMEM53-205ENST00000372244 MAP3K12Q12852 859 aa24.38■■□□□ 1.49
TMEM53-205ENST00000372244 WRNIP1Q96S55 665 aa24.38■■□□□ 1.49
TMEM53-205ENST00000372244 ELP3Q9H9T3 547 aa24.38■■□□□ 1.49
TMEM53-205ENST00000372244 AATFQ9NY61 560 aaKnown RBP eCLIP24.38■■□□□ 1.49
TMEM53-205ENST00000372244 MANSC4A6NHS7 340 aaPredicted RBP24.37■■□□□ 1.49
TMEM53-205ENST00000372244 CYP7A1P22680 504 aa24.37■■□□□ 1.49
TMEM53-205ENST00000372244 PICALMQ13492 652 aa24.37■■□□□ 1.49
TMEM53-205ENST00000372244 ZKSCAN4Q969J2 545 aaPredicted RBP24.37■■□□□ 1.49
TMEM53-205ENST00000372244 NOL10Q9BSC4 688 aaKnown RBP24.37■■□□□ 1.49
TMEM53-205ENST00000372244 CSADQ9Y600 493 aa24.37■■□□□ 1.49
TMEM53-205ENST00000372244 SREBF2Q12772 1141 aa24.36■■□□□ 1.49
TMEM53-205ENST00000372244 TEX11Q8IYF3 940 aa24.36■■□□□ 1.49
TMEM53-205ENST00000372244 MAGEB6Q8N7X4 407 aa24.36■■□□□ 1.49
TMEM53-205ENST00000372244 OPTNQ96CV9 577 aa24.36■■□□□ 1.49
TMEM53-205ENST00000372244 HAUS7Q99871 368 aa24.36■■□□□ 1.49
TMEM53-205ENST00000372244 BOLA2Q9H3K6 86 aa24.36■■□□□ 1.49
TMEM53-205ENST00000372244 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.36■■□□□ 1.49
TMEM53-205ENST00000372244 SUPT16HQ9Y5B9 1047 aaKnown RBP24.36■■□□□ 1.49
TMEM53-205ENST00000372244 SNCAIPQ9Y6H5 919 aa24.36■■□□□ 1.49
TMEM53-205ENST00000372244 PHF20L1A8MW92 1017 aa24.35■■□□□ 1.49
TMEM53-205ENST00000372244 HDAC1Q13547 482 aaPredicted RBP24.35■■□□□ 1.49
TMEM53-205ENST00000372244 ZSCAN29Q8IWY8 852 aaPredicted RBP24.35■■□□□ 1.49
TMEM53-205ENST00000372244 CNKSR2Q8WXI2 1034 aa24.35■■□□□ 1.49
TMEM53-205ENST00000372244 MYO5AQ9Y4I1 1855 aaKnown RBP24.35■■□□□ 1.49
TMEM53-205ENST00000372244 GOLIM4O00461 696 aa24.34■■□□□ 1.49
TMEM53-205ENST00000372244 INPP5BP32019 993 aa24.34■■□□□ 1.49
TMEM53-205ENST00000372244 MS4A4AQ96JQ5 239 aa24.34■■□□□ 1.49
TMEM53-205ENST00000372244 OSBPL5Q9H0X9 879 aaPredicted RBP24.34■■□□□ 1.49
TMEM53-205ENST00000372244 TESPA1A2RU30 521 aaPredicted RBP24.33■■□□□ 1.49
TMEM53-205ENST00000372244 SPDYE5A6NIY4 337 aa24.33■■□□□ 1.49
TMEM53-205ENST00000372244 TBC1D12O60347 775 aa24.33■■□□□ 1.49
TMEM53-205ENST00000372244 ERO1BQ86YB8 467 aa24.33■■□□□ 1.49
TMEM53-205ENST00000372244 EDC3Q96F86 508 aaKnown RBP24.33■■□□□ 1.49
TMEM53-205ENST00000372244 DNAJC2Q99543 621 aaKnown RBP24.33■■□□□ 1.49
TMEM53-205ENST00000372244 ECHDC1Q9NTX5 307 aa24.33■■□□□ 1.49
TMEM53-205ENST00000372244 PAG1Q9NWQ8 432 aa24.33■■□□□ 1.49
TMEM53-205ENST00000372244 SLC9C2Q5TAH2 1124 aa24.32■■□□□ 1.48
TMEM53-205ENST00000372244 CERS3Q8IU89 383 aa24.32■■□□□ 1.48
TMEM53-205ENST00000372244 TGFBRAP1Q8WUH2 860 aa24.32■■□□□ 1.48
TMEM53-205ENST00000372244 PDE6AP16499 860 aa24.32■■□□□ 1.48
TMEM53-205ENST00000372244 DYNLL1P63167 89 aaKnown RBP24.32■■□□□ 1.48
TMEM53-205ENST00000372244 NOL9Q5SY16 702 aaKnown RBP24.32■■□□□ 1.48
TMEM53-205ENST00000372244 IFNL1Q8IU54 200 aa24.32■■□□□ 1.48
TMEM53-205ENST00000372244 CFHR5Q9BXR6 569 aa24.32■■□□□ 1.48
TMEM53-205ENST00000372244 COL2A1P02458 1487 aaPredicted RBP24.31■■□□□ 1.48
TMEM53-205ENST00000372244 OTOFQ9HC10 1997 aa24.31■■□□□ 1.48
TMEM53-205ENST00000372244 MIGA1Q8NAN2 632 aa24.31■■□□□ 1.48
TMEM53-205ENST00000372244 EXOC6Q8TAG9 804 aa24.31■■□□□ 1.48
TMEM53-205ENST00000372244 PTPN18Q99952 460 aa24.31■■□□□ 1.48
TMEM53-205ENST00000372244 AK9Q5TCS8 1911 aa24.3■■□□□ 1.48
TMEM53-205ENST00000372244 TCRBV5S4A2TA0A5A2 114 aa24.3■■□□□ 1.48
TMEM53-205ENST00000372244 SLURP2P0DP57 97 aa24.3■■□□□ 1.48
TMEM53-205ENST00000372244 OTUD5Q96G74 571 aa24.3■■□□□ 1.48
TMEM53-205ENST00000372244 RIOK1Q9BRS2 568 aaKnown RBP24.3■■□□□ 1.48
TMEM53-205ENST00000372244 DHX36Q9H2U1 1008 aaKnown RBP24.3■■□□□ 1.48
TMEM53-205ENST00000372244 IGF2BP3O00425 579 aaKnown RBP eCLIP24.29■■□□□ 1.48
TMEM53-205ENST00000372244 ALDH1A1P00352 501 aa24.29■■□□□ 1.48
TMEM53-205ENST00000372244 GTF2A2P52657 109 aa24.29■■□□□ 1.48
TMEM53-205ENST00000372244 PPATQ06203 517 aa24.29■■□□□ 1.48
TMEM53-205ENST00000372244 GCC1Q96CN9 775 aa24.29■■□□□ 1.48
TMEM53-205ENST00000372244 MAST2Q6P0Q8 1798 aa24.28■■□□□ 1.48
TMEM53-205ENST00000372244 IRF6O14896 467 aa24.28■■□□□ 1.48
TMEM53-205ENST00000372244 CTNND1O60716 968 aaKnown RBP24.28■■□□□ 1.48
TMEM53-205ENST00000372244 PPIL2Q13356 520 aa24.28■■□□□ 1.48
TMEM53-205ENST00000372244 METTL16Q86W50 562 aaKnown RBP24.28■■□□□ 1.48
TMEM53-205ENST00000372244 MAPKAPK5Q8IW41 473 aa24.28■■□□□ 1.48
TMEM53-205ENST00000372244 PI4KBQ9UBF8 816 aa24.28■■□□□ 1.48
TMEM53-205ENST00000372244 FLT1P17948 1338 aa24.28■■□□□ 1.48
TMEM53-205ENST00000372244 TBC1D8O95759 1140 aa24.27■■□□□ 1.48
TMEM53-205ENST00000372244 TNS4Q8IZW8 715 aa24.27■■□□□ 1.48
TMEM53-205ENST00000372244 ZNF532Q9HCE3 1301 aa24.27■■□□□ 1.48
TMEM53-205ENST00000372244 DOCK2Q92608 1830 aa24.27■■□□□ 1.48
TMEM53-205ENST00000372244 NOM1Q5C9Z4 860 aaKnown RBP24.26■■□□□ 1.47
TMEM53-205ENST00000372244 BRI3BPQ8WY22 251 aa24.26■■□□□ 1.47
TMEM53-205ENST00000372244 GPATCH3Q96I76 525 aa24.26■■□□□ 1.47
TMEM53-205ENST00000372244 R3HDMLQ9H3Y0 253 aa24.26■■□□□ 1.47
TMEM53-205ENST00000372244 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.26■■□□□ 1.47
TMEM53-205ENST00000372244 ADD2P35612 726 aa24.26■■□□□ 1.47
TMEM53-205ENST00000372244 FOXP4Q8IVH2 680 aaPredicted RBP24.26■■□□□ 1.47
TMEM53-205ENST00000372244 SCYL3Q8IZE3 742 aa24.26■■□□□ 1.47
TMEM53-205ENST00000372244 HERC5Q9UII4 1024 aaKnown RBP24.26■■□□□ 1.47
TMEM53-205ENST00000372244 PALD1Q9ULE6 856 aa24.26■■□□□ 1.47
TMEM53-205ENST00000372244 KCNH4Q9UQ05 1017 aa24.26■■□□□ 1.47
TMEM53-205ENST00000372244 MAGEB6P1A0A0J9YX57 407 aa24.25■■□□□ 1.47
TMEM53-205ENST00000372244 PTPRAP18433 802 aa24.25■■□□□ 1.47
TMEM53-205ENST00000372244 SNAPC2Q13487 334 aa24.25■■□□□ 1.47
TMEM53-205ENST00000372244 ANKRD45Q5TZF3 282 aa24.25■■□□□ 1.47
TMEM53-205ENST00000372244 TSHZ3Q63HK5 1081 aa24.25■■□□□ 1.47
TMEM53-205ENST00000372244 OTUD7BQ6GQQ9 843 aa24.25■■□□□ 1.47
TMEM53-205ENST00000372244 TTC41PQ6P2S7 1318 aa24.25■■□□□ 1.47
TMEM53-205ENST00000372244 OTUD7AQ8TE49 926 aaPredicted RBP24.25■■□□□ 1.47
TMEM53-205ENST00000372244 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.25■■□□□ 1.47
TMEM53-205ENST00000372244 RWDD1Q9H446 243 aaPredicted RBP24.25■■□□□ 1.47
TMEM53-205ENST00000372244 LAMB1P07942 1786 aa24.24■■□□□ 1.47
TMEM53-205ENST00000372244 CCL15-CCL14A0A0B4J2E2 113 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms