RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 MPHOSPH6Q99547 160 aaKnown RBP13.37□□□□□ -0.27
DEPDC1-201ENST00000370966 PFKFB2O60825 505 aa13.37□□□□□ -0.27
DEPDC1-201ENST00000370966 LETM2Q2VYF4 491 aa13.37□□□□□ -0.27
DEPDC1-201ENST00000370966 ZNF569Q5MCW4 686 aa13.37□□□□□ -0.27
DEPDC1-201ENST00000370966 TTC38Q5R3I4 469 aa13.37□□□□□ -0.27
DEPDC1-201ENST00000370966 GPR108Q9NPR9 543 aa13.37□□□□□ -0.27
DEPDC1-201ENST00000370966 RNF216Q9NWF9 866 aaPredicted RBP13.37□□□□□ -0.27
DEPDC1-201ENST00000370966 NEBLO76041 1014 aa13.36□□□□□ -0.27
DEPDC1-201ENST00000370966 PCCAP05165 728 aaPredicted RBP13.36□□□□□ -0.27
DEPDC1-201ENST00000370966 RPL13P26373 211 aaKnown RBP13.36□□□□□ -0.27
DEPDC1-201ENST00000370966 TUBB2AQ13885 445 aa13.36□□□□□ -0.27
DEPDC1-201ENST00000370966 KARSQ15046 597 aaKnown RBP13.36□□□□□ -0.27
DEPDC1-201ENST00000370966 CCDC65Q8IXS2 484 aa13.36□□□□□ -0.27
DEPDC1-201ENST00000370966 RBM17Q96I25 401 aaKnown RBP13.36□□□□□ -0.27
DEPDC1-201ENST00000370966 TUBB2BQ9BVA1 445 aa13.36□□□□□ -0.27
DEPDC1-201ENST00000370966 GUCA1BQ9UMX6 200 aa13.36□□□□□ -0.27
DEPDC1-201ENST00000370966 SHROOM2Q13796 1616 aa13.36□□□□□ -0.27
DEPDC1-201ENST00000370966 IGSF22Q8N9C0 903 aa13.36□□□□□ -0.27
DEPDC1-201ENST00000370966 DDX12PQ92771 950 aa13.36□□□□□ -0.27
DEPDC1-201ENST00000370966 ZBTB38Q8NAP3 1195 aaPredicted RBP13.36□□□□□ -0.27
DEPDC1-201ENST00000370966 LZTS2Q9BRK4 669 aa13.36□□□□□ -0.27
DEPDC1-201ENST00000370966 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.36□□□□□ -0.27
DEPDC1-201ENST00000370966 V9GYY5 206 aaPredicted RBP13.36□□□□□ -0.27
DEPDC1-201ENST00000370966 TAF5LO75529 589 aa13.35□□□□□ -0.27
DEPDC1-201ENST00000370966 HSPD1P10809 573 aaKnown RBP13.35□□□□□ -0.27
DEPDC1-201ENST00000370966 CTSWP56202 376 aa13.35□□□□□ -0.27
DEPDC1-201ENST00000370966 TBC1D8BQ0IIM8 1120 aa13.35□□□□□ -0.27
DEPDC1-201ENST00000370966 DRC1Q96MC2 740 aa13.35□□□□□ -0.27
DEPDC1-201ENST00000370966 TPCN1Q9ULQ1 816 aa13.35□□□□□ -0.27
DEPDC1-201ENST00000370966 PRDM1O75626 825 aa13.35□□□□□ -0.27
DEPDC1-201ENST00000370966 PIK3AP1Q6ZUJ8 805 aa13.35□□□□□ -0.27
DEPDC1-201ENST00000370966 PHKBQ93100 1093 aa13.35□□□□□ -0.27
DEPDC1-201ENST00000370966 BICD1Q96G01 975 aa13.35□□□□□ -0.27
DEPDC1-201ENST00000370966 LSG1Q9H089 658 aaKnown RBP13.35□□□□□ -0.27
DEPDC1-201ENST00000370966 OPA1O60313 960 aa13.35□□□□□ -0.27
DEPDC1-201ENST00000370966 FAM13AO94988 1023 aa13.35□□□□□ -0.27
DEPDC1-201ENST00000370966 PPP1R9BQ96SB3 815 aa13.35□□□□□ -0.27
DEPDC1-201ENST00000370966 CCNL1Q9UK58 526 aaPredicted RBP13.35□□□□□ -0.27
DEPDC1-201ENST00000370966 NLRP1Q9C000 1473 aa13.35□□□□□ -0.27
DEPDC1-201ENST00000370966 ARHGAP6O43182 974 aa13.35□□□□□ -0.27
DEPDC1-201ENST00000370966 CNNM4Q6P4Q7 775 aa13.35□□□□□ -0.27
DEPDC1-201ENST00000370966 TFCP2L1Q9NZI6 479 aa13.35□□□□□ -0.27
DEPDC1-201ENST00000370966 TTF2Q9UNY4 1162 aaKnown RBP13.35□□□□□ -0.27
DEPDC1-201ENST00000370966 NFE2L3Q9Y4A8 694 aa13.35□□□□□ -0.27
DEPDC1-201ENST00000370966 CCDC94Q9BW85 323 aaPredicted RBP13.34□□□□□ -0.27
DEPDC1-201ENST00000370966 PARP3Q9Y6F1 533 aa13.34□□□□□ -0.27
DEPDC1-201ENST00000370966 TET3O43151 1660 aa13.34□□□□□ -0.27
DEPDC1-201ENST00000370966 ROBO2Q9HCK4 1378 aa13.34□□□□□ -0.27
DEPDC1-201ENST00000370966 MAST3O60307 1309 aa13.34□□□□□ -0.27
DEPDC1-201ENST00000370966 UFL1O94874 794 aa13.34□□□□□ -0.27
DEPDC1-201ENST00000370966 TTLL7Q6ZT98 887 aa13.34□□□□□ -0.27
DEPDC1-201ENST00000370966 JAG2Q9Y219 1238 aa13.34□□□□□ -0.27
DEPDC1-201ENST00000370966 ARHGAP31Q2M1Z3 1444 aa13.34□□□□□ -0.27
DEPDC1-201ENST00000370966 CUL4AQ13619 759 aa13.34□□□□□ -0.27
DEPDC1-201ENST00000370966 KRT25Q7Z3Z0 450 aa13.34□□□□□ -0.27
DEPDC1-201ENST00000370966 GGA1Q9UJY5 639 aa13.34□□□□□ -0.27
DEPDC1-201ENST00000370966 PRR36Q9H6K5 1346 aa13.34□□□□□ -0.27
DEPDC1-201ENST00000370966 PDE4DQ08499 809 aa13.34□□□□□ -0.27
DEPDC1-201ENST00000370966 CCDC122Q5T0U0 273 aa13.34□□□□□ -0.27
DEPDC1-201ENST00000370966 TSGA10Q9BZW7 698 aa13.34□□□□□ -0.27
DEPDC1-201ENST00000370966 CPSF1Q10570 1443 aaKnown RBP13.33□□□□□ -0.28
DEPDC1-201ENST00000370966 FSD2A1L4K1 749 aa13.33□□□□□ -0.28
DEPDC1-201ENST00000370966 TTLL12Q14166 644 aaPredicted RBP13.33□□□□□ -0.28
DEPDC1-201ENST00000370966 POSTNQ15063 836 aa13.33□□□□□ -0.28
DEPDC1-201ENST00000370966 CCDC155Q8N6L0 562 aa13.33□□□□□ -0.28
DEPDC1-201ENST00000370966 MYL10Q9BUA6 226 aa13.33□□□□□ -0.28
DEPDC1-201ENST00000370966 KIAA1468Q9P260 1216 aa13.33□□□□□ -0.28
DEPDC1-201ENST00000370966 ADCY10Q96PN6 1610 aa13.33□□□□□ -0.28
DEPDC1-201ENST00000370966 IQGAP3Q86VI3 1631 aa13.33□□□□□ -0.28
DEPDC1-201ENST00000370966 PLIN2Q99541 437 aa13.33□□□□□ -0.28
DEPDC1-201ENST00000370966 TRAF5O00463 557 aa13.33□□□□□ -0.28
DEPDC1-201ENST00000370966 IVLP07476 585 aa13.33□□□□□ -0.28
DEPDC1-201ENST00000370966 ACTN2P35609 894 aa13.33□□□□□ -0.28
DEPDC1-201ENST00000370966 CCT6AP40227 531 aaKnown RBP13.33□□□□□ -0.28
DEPDC1-201ENST00000370966 RPS8P62241 208 aaKnown RBP13.33□□□□□ -0.28
DEPDC1-201ENST00000370966 CTDSPL2Q05D32 466 aa13.33□□□□□ -0.28
DEPDC1-201ENST00000370966 PAK1Q13153 545 aa13.33□□□□□ -0.28
DEPDC1-201ENST00000370966 NONOQ15233 471 aaKnown RBP eCLIP13.33□□□□□ -0.28
DEPDC1-201ENST00000370966 NOC4LQ9BVI4 516 aaKnown RBP13.33□□□□□ -0.28
DEPDC1-201ENST00000370966 SH2D4AQ9H788 454 aa13.33□□□□□ -0.28
DEPDC1-201ENST00000370966 RASAL2Q9UJF2 1139 aa13.33□□□□□ -0.28
DEPDC1-201ENST00000370966 SYNRGQ9UMZ2 1314 aa13.33□□□□□ -0.28
DEPDC1-201ENST00000370966 ARAP3Q8WWN8 1544 aa13.33□□□□□ -0.28
DEPDC1-201ENST00000370966 CIAO1O76071 339 aa13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 PDE6AP16499 860 aa13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 VAV2P52735 878 aa13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 PKP1Q13835 747 aa13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 RNF187Q5TA31 235 aaPredicted RBP13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 SPECC1LQ69YQ0 1117 aa13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 SIRT2Q8IXJ6 389 aa13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 RASEFQ8IZ41 740 aa13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 USP28Q96RU2 1077 aa13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 NUP58Q9BVL2 599 aa13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 AATFQ9NY61 560 aaKnown RBP eCLIP13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 PTCH1Q13635 1447 aa13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 RIMBP2O15034 1052 aa13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 ARID5AQ03989 594 aa13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 UBE3CQ15386 1083 aa13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 TMTC1Q8IUR5 882 aa13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 ZNF654Q8IZM8 581 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms