RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 PLEKHM2Q8IWE5 1019 aa11.12□□□□□ -0.63
SCAF11-202ENST00000369367 NECAB1Q8N987 351 aa11.12□□□□□ -0.63
SCAF11-202ENST00000369367 TGFBRAP1Q8WUH2 860 aa11.12□□□□□ -0.63
SCAF11-202ENST00000369367 ADGRL3Q9HAR2 1447 aa11.12□□□□□ -0.63
SCAF11-202ENST00000369367 ARHGEF35A5YM69 484 aa11.12□□□□□ -0.63
SCAF11-202ENST00000369367 WDR44Q5JSH3 913 aa11.12□□□□□ -0.63
SCAF11-202ENST00000369367 TBC1D2Q9BYX2 928 aa11.12□□□□□ -0.63
SCAF11-202ENST00000369367 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.12□□□□□ -0.63
SCAF11-202ENST00000369367 MAPKAPK5Q8IW41 473 aa11.12□□□□□ -0.63
SCAF11-202ENST00000369367 AFMP43652 599 aa11.11□□□□□ -0.63
SCAF11-202ENST00000369367 TTLL6Q8N841 843 aa11.11□□□□□ -0.63
SCAF11-202ENST00000369367 IL17REQ8NFR9 667 aa11.11□□□□□ -0.63
SCAF11-202ENST00000369367 TRIM35Q9UPQ4 493 aa11.11□□□□□ -0.63
SCAF11-202ENST00000369367 POTEB2H3BUK9 544 aa11.11□□□□□ -0.63
SCAF11-202ENST00000369367 RFX1P22670 979 aa11.11□□□□□ -0.63
SCAF11-202ENST00000369367 CASQ1P31415 396 aa11.11□□□□□ -0.63
SCAF11-202ENST00000369367 MCM7P33993 719 aa11.11□□□□□ -0.63
SCAF11-202ENST00000369367 SNX21Q969T3 373 aa11.11□□□□□ -0.63
SCAF11-202ENST00000369367 IWS1Q96ST2 819 aa11.11□□□□□ -0.63
SCAF11-202ENST00000369367 DSCC1Q9BVC3 393 aa11.11□□□□□ -0.63
SCAF11-202ENST00000369367 OSBPP22059 807 aa11.11□□□□□ -0.63
SCAF11-202ENST00000369367 LMAN1P49257 510 aa11.11□□□□□ -0.63
SCAF11-202ENST00000369367 NONOQ15233 471 aaKnown RBP eCLIP11.11□□□□□ -0.63
SCAF11-202ENST00000369367 CENPHQ9H3R5 247 aa11.11□□□□□ -0.63
SCAF11-202ENST00000369367 ZNF532Q9HCE3 1301 aa11.11□□□□□ -0.63
SCAF11-202ENST00000369367 CIAO1O76071 339 aa11.11□□□□□ -0.63
SCAF11-202ENST00000369367 APOBRQ0VD83 1088 aa11.11□□□□□ -0.63
SCAF11-202ENST00000369367 OTUD6AQ7L8S5 288 aa11.11□□□□□ -0.63
SCAF11-202ENST00000369367 ZBTB21Q9ULJ3 1066 aa11.11□□□□□ -0.63
SCAF11-202ENST00000369367 B4E1Z4 1266 aa11.11□□□□□ -0.63
SCAF11-202ENST00000369367 SP4Q02446 784 aa11.11□□□□□ -0.63
SCAF11-202ENST00000369367 LETM2Q2VYF4 491 aa11.11□□□□□ -0.63
SCAF11-202ENST00000369367 CPXCR1Q8N123 301 aa11.11□□□□□ -0.63
SCAF11-202ENST00000369367 GOLGA1Q92805 767 aa11.11□□□□□ -0.63
SCAF11-202ENST00000369367 ATP8A2Q9NTI2 1148 aa11.11□□□□□ -0.63
SCAF11-202ENST00000369367 NR1I2O75469 434 aa11.1□□□□□ -0.63
SCAF11-202ENST00000369367 CCT6AP40227 531 aaKnown RBP11.1□□□□□ -0.63
SCAF11-202ENST00000369367 PRKG1Q13976 671 aa11.1□□□□□ -0.63
SCAF11-202ENST00000369367 SREK1Q8WXA9 508 aaKnown RBP11.1□□□□□ -0.63
SCAF11-202ENST00000369367 GPR108Q9NPR9 543 aa11.1□□□□□ -0.63
SCAF11-202ENST00000369367 RNF123Q5XPI4 1314 aa11.1□□□□□ -0.63
SCAF11-202ENST00000369367 BIN1O00499 593 aa11.1□□□□□ -0.63
SCAF11-202ENST00000369367 MYCLP12524 364 aaPredicted RBP11.1□□□□□ -0.63
SCAF11-202ENST00000369367 BBXQ8WY36 941 aaPredicted RBP11.1□□□□□ -0.63
SCAF11-202ENST00000369367 HAUS2Q9NVX0 235 aa11.1□□□□□ -0.63
SCAF11-202ENST00000369367 FAM212AQ96EL1 285 aa11.1□□□□□ -0.63
SCAF11-202ENST00000369367 MRVI1Q9Y6F6 885 aa11.1□□□□□ -0.63
SCAF11-202ENST00000369367 NCAPD2Q15021 1401 aa11.1□□□□□ -0.63
SCAF11-202ENST00000369367 H0YCG3 227 aa11.1□□□□□ -0.63
SCAF11-202ENST00000369367 ZNF354CQ86Y25 554 aa11.1□□□□□ -0.63
SCAF11-202ENST00000369367 LARP6Q9BRS8 491 aaKnown RBP11.1□□□□□ -0.63
SCAF11-202ENST00000369367 PIM2Q9P1W9 311 aa11.1□□□□□ -0.63
SCAF11-202ENST00000369367 ZYXQ15942 572 aaKnown RBP11.1□□□□□ -0.63
SCAF11-202ENST00000369367 CERKLQ49MI3 558 aaPredicted RBP11.1□□□□□ -0.63
SCAF11-202ENST00000369367 NBPF3Q9H094 633 aa11.1□□□□□ -0.63
SCAF11-202ENST00000369367 ATG3Q9NT62 314 aa11.1□□□□□ -0.63
SCAF11-202ENST00000369367 ZBTB24O43167 697 aaPredicted RBP11.1□□□□□ -0.63
SCAF11-202ENST00000369367 STAMBPO95630 424 aa11.1□□□□□ -0.63
SCAF11-202ENST00000369367 KIFAP3Q92845 792 aa11.1□□□□□ -0.63
SCAF11-202ENST00000369367 NOX5Q96PH1 765 aa11.1□□□□□ -0.63
SCAF11-202ENST00000369367 USP25Q9UHP3 1055 aa11.1□□□□□ -0.63
SCAF11-202ENST00000369367 ADCY10Q96PN6 1610 aa11.1□□□□□ -0.63
SCAF11-202ENST00000369367 EPB41P11171 864 aaKnown RBP11.09□□□□□ -0.63
SCAF11-202ENST00000369367 SELENOOQ9BVL4 669 aa11.09□□□□□ -0.63
SCAF11-202ENST00000369367 F13A1P00488 732 aa11.09□□□□□ -0.63
SCAF11-202ENST00000369367 RPS6KB1P23443 525 aa11.09□□□□□ -0.63
SCAF11-202ENST00000369367 TSPYL1Q9H0U9 437 aa11.09□□□□□ -0.63
SCAF11-202ENST00000369367 PALLDQ8WX93 1383 aa11.09□□□□□ -0.63
SCAF11-202ENST00000369367 MYO3BQ8WXR4 1341 aa11.09□□□□□ -0.63
SCAF11-202ENST00000369367 TFAP4Q01664 338 aa11.09□□□□□ -0.63
SCAF11-202ENST00000369367 AKNAD1Q5T1N1 836 aa11.09□□□□□ -0.63
SCAF11-202ENST00000369367 KIAA0825Q8IV33 1275 aa11.09□□□□□ -0.63
SCAF11-202ENST00000369367 DHX58Q96C10 678 aa11.09□□□□□ -0.63
SCAF11-202ENST00000369367 MASTLQ96GX5 879 aa11.09□□□□□ -0.63
SCAF11-202ENST00000369367 MMRN2Q9H8L6 949 aa11.09□□□□□ -0.63
SCAF11-202ENST00000369367 FSD2A1L4K1 749 aa11.09□□□□□ -0.63
SCAF11-202ENST00000369367 RPS6KA4O75676 772 aa11.09□□□□□ -0.63
SCAF11-202ENST00000369367 IREB2P48200 963 aaKnown RBP11.09□□□□□ -0.63
SCAF11-202ENST00000369367 CNNM4Q6P4Q7 775 aa11.09□□□□□ -0.63
SCAF11-202ENST00000369367 KIAA0754O94854 1291 aa11.09□□□□□ -0.63
SCAF11-202ENST00000369367 KIAA0753Q2KHM9 967 aa11.09□□□□□ -0.63
SCAF11-202ENST00000369367 KRT26Q7Z3Y9 468 aa11.09□□□□□ -0.63
SCAF11-202ENST00000369367 TCEANC2Q96MN5 208 aa11.09□□□□□ -0.63
SCAF11-202ENST00000369367 ASAP1Q9ULH1 1129 aa11.09□□□□□ -0.63
SCAF11-202ENST00000369367 STX10O60499 249 aa11.09□□□□□ -0.63
SCAF11-202ENST00000369367 CHRNDQ07001 517 aa11.09□□□□□ -0.63
SCAF11-202ENST00000369367 GALNT17Q6IS24 598 aa11.09□□□□□ -0.63
SCAF11-202ENST00000369367 CCDC24Q8N4L8 307 aa11.09□□□□□ -0.63
SCAF11-202ENST00000369367 DHX36Q9H2U1 1008 aaKnown RBP11.09□□□□□ -0.63
SCAF11-202ENST00000369367 RTEL1Q9NZ71 1219 aa11.09□□□□□ -0.63
SCAF11-202ENST00000369367 ZAP70P43403 619 aa11.08□□□□□ -0.63
SCAF11-202ENST00000369367 IFFO1Q0D2I5 559 aa11.08□□□□□ -0.63
SCAF11-202ENST00000369367 GADL1Q6ZQY3 521 aa11.08□□□□□ -0.63
SCAF11-202ENST00000369367 CPLX3Q8WVH0 158 aa11.08□□□□□ -0.63
SCAF11-202ENST00000369367 IKBKGQ9Y6K9 419 aa11.08□□□□□ -0.63
SCAF11-202ENST00000369367 PDCL2Q8N4E4 241 aa11.08□□□□□ -0.64
SCAF11-202ENST00000369367 PDE8BO95263 885 aa11.08□□□□□ -0.64
SCAF11-202ENST00000369367 TRPC3Q13507 836 aa11.08□□□□□ -0.64
SCAF11-202ENST00000369367 NEK11Q8NG66 645 aa11.08□□□□□ -0.64
SCAF11-202ENST00000369367 REXO1Q8N1G1 1221 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms