RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 FPGT-TNNI3KV9GXZ4 949 aa20.1■□□□□ 0.81
SNX27-203ENST00000368843 VAMP4O75379 141 aa20.1■□□□□ 0.81
SNX27-203ENST00000368843 ATRIPQ8WXE1 791 aa20.1■□□□□ 0.81
SNX27-203ENST00000368843 DDX17Q92841 729 aaKnown RBP20.1■□□□□ 0.81
SNX27-203ENST00000368843 SMC6Q96SB8 1091 aa20.1■□□□□ 0.81
SNX27-203ENST00000368843 ZMYM3Q14202 1370 aa20.1■□□□□ 0.81
SNX27-203ENST00000368843 CTDSPL2Q05D32 466 aa20.1■□□□□ 0.81
SNX27-203ENST00000368843 DDX21Q9NR30 783 aaKnown RBP eCLIP20.1■□□□□ 0.81
SNX27-203ENST00000368843 A0A1W2PP64 1363 aa20.09■□□□□ 0.81
SNX27-203ENST00000368843 HSPA4P34932 840 aa20.09■□□□□ 0.81
SNX27-203ENST00000368843 ARFGAP3Q9NP61 516 aa20.09■□□□□ 0.81
SNX27-203ENST00000368843 M0QZ92 97 aa20.09■□□□□ 0.81
SNX27-203ENST00000368843 GEN1Q17RS7 908 aa20.09■□□□□ 0.81
SNX27-203ENST00000368843 WDR66Q8TBY9 1149 aa20.09■□□□□ 0.81
SNX27-203ENST00000368843 TIGD1Q96MW7 591 aa20.09■□□□□ 0.81
SNX27-203ENST00000368843 AZI2Q9H6S1 392 aa20.09■□□□□ 0.81
SNX27-203ENST00000368843 CALCOCO1Q9P1Z2 691 aa20.09■□□□□ 0.81
SNX27-203ENST00000368843 MTUS1Q9ULD2 1270 aa20.09■□□□□ 0.81
SNX27-203ENST00000368843 HAUS3Q68CZ6 603 aa20.09■□□□□ 0.81
SNX27-203ENST00000368843 HOOK2Q96ED9 719 aa20.09■□□□□ 0.81
SNX27-203ENST00000368843 ATP10BO94823 1461 aa20.09■□□□□ 0.81
SNX27-203ENST00000368843 IGSF3O75054 1194 aa20.09■□□□□ 0.81
SNX27-203ENST00000368843 RHOXF2BP0C7M4 288 aa20.09■□□□□ 0.81
SNX27-203ENST00000368843 PLCD1P51178 756 aa20.09■□□□□ 0.81
SNX27-203ENST00000368843 RHOXF2Q9BQY4 288 aa20.09■□□□□ 0.81
SNX27-203ENST00000368843 A0A1B0GVL5 298 aa20.09■□□□□ 0.81
SNX27-203ENST00000368843 KLHDC4Q8TBB5 520 aa20.09■□□□□ 0.81
SNX27-203ENST00000368843 CCT6BQ92526 530 aa20.09■□□□□ 0.81
SNX27-203ENST00000368843 EYA2O00167 538 aa20.08■□□□□ 0.81
SNX27-203ENST00000368843 TNFAIP3P21580 790 aa20.08■□□□□ 0.81
SNX27-203ENST00000368843 ANAPC4Q9UJX5 808 aa20.08■□□□□ 0.81
SNX27-203ENST00000368843 SF3A3Q12874 501 aaKnown RBP eCLIP20.08■□□□□ 0.81
SNX27-203ENST00000368843 EXOC7Q9UPT5 735 aa20.08■□□□□ 0.81
SNX27-203ENST00000368843 LUC7L2Q9Y383 392 aaKnown RBP20.08■□□□□ 0.81
SNX27-203ENST00000368843 MAP3K19Q56UN5 1328 aa20.08■□□□□ 0.81
SNX27-203ENST00000368843 PRDM1O75626 825 aa20.08■□□□□ 0.8
SNX27-203ENST00000368843 DEXIO95424 95 aa20.08■□□□□ 0.8
SNX27-203ENST00000368843 CPA1P15085 419 aa20.08■□□□□ 0.8
SNX27-203ENST00000368843 CHMLP26374 656 aa20.08■□□□□ 0.8
SNX27-203ENST00000368843 ELP1O95163 1332 aa20.08■□□□□ 0.8
SNX27-203ENST00000368843 LPXNO60711 386 aa20.08■□□□□ 0.8
SNX27-203ENST00000368843 A1BGP04217 495 aa20.08■□□□□ 0.8
SNX27-203ENST00000368843 MNAT1P51948 309 aa20.08■□□□□ 0.8
SNX27-203ENST00000368843 IRX5P78411 483 aaPredicted RBP20.08■□□□□ 0.8
SNX27-203ENST00000368843 ZWINTO95229 277 aa20.07■□□□□ 0.8
SNX27-203ENST00000368843 ANKS4BQ8N8V4 417 aa20.07■□□□□ 0.8
SNX27-203ENST00000368843 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.07■□□□□ 0.8
SNX27-203ENST00000368843 SLC1A4P43007 532 aa20.07■□□□□ 0.8
SNX27-203ENST00000368843 FAM204AQ9H8W3 233 aa20.07■□□□□ 0.8
SNX27-203ENST00000368843 SPOPO43791 374 aa20.07■□□□□ 0.8
SNX27-203ENST00000368843 ERCC5P28715 1186 aaPredicted RBP20.07■□□□□ 0.8
SNX27-203ENST00000368843 TPD52P55327 224 aaPredicted RBP20.07■□□□□ 0.8
SNX27-203ENST00000368843 RNASE9P60153 205 aaKnown RBP20.07■□□□□ 0.8
SNX27-203ENST00000368843 CNNM4Q6P4Q7 775 aa20.07■□□□□ 0.8
SNX27-203ENST00000368843 MTRF1LQ9UGC7 380 aaKnown RBP20.07■□□□□ 0.8
SNX27-203ENST00000368843 V9GY48 417 aaPredicted RBP20.07■□□□□ 0.8
SNX27-203ENST00000368843 PRAG1Q86YV5 1406 aa20.07■□□□□ 0.8
SNX27-203ENST00000368843 CFAP65Q6ZU64 1925 aaKnown RBP20.07■□□□□ 0.8
SNX27-203ENST00000368843 TLDC2A0PJX2 215 aa20.07■□□□□ 0.8
SNX27-203ENST00000368843 IRX3P78415 501 aaPredicted RBP20.07■□□□□ 0.8
SNX27-203ENST00000368843 TGFBRAP1Q8WUH2 860 aa20.07■□□□□ 0.8
SNX27-203ENST00000368843 UBLCP1Q8WVY7 318 aaPredicted RBP20.07■□□□□ 0.8
SNX27-203ENST00000368843 UHRF1BP1Q6BDS2 1440 aa20.07■□□□□ 0.8
SNX27-203ENST00000368843 RAD50Q92878 1312 aa20.07■□□□□ 0.8
SNX27-203ENST00000368843 RPS6KB1P23443 525 aa20.07■□□□□ 0.8
SNX27-203ENST00000368843 TTC14Q96N46 770 aa20.07■□□□□ 0.8
SNX27-203ENST00000368843 DCTPP1Q9H773 170 aa20.07■□□□□ 0.8
SNX27-203ENST00000368843 MAPK8IP1Q9UQF2 711 aa20.07■□□□□ 0.8
SNX27-203ENST00000368843 TBC1D7Q9P0N9 293 aa20.06■□□□□ 0.8
SNX27-203ENST00000368843 KRT19P08727 400 aa20.06■□□□□ 0.8
SNX27-203ENST00000368843 ERCC3P19447 782 aa20.06■□□□□ 0.8
SNX27-203ENST00000368843 SMCR8Q8TEV9 937 aaPredicted RBP20.06■□□□□ 0.8
SNX27-203ENST00000368843 PPIP5K2O43314 1243 aa20.06■□□□□ 0.8
SNX27-203ENST00000368843 INF2Q27J81 1249 aa20.06■□□□□ 0.8
SNX27-203ENST00000368843 KMT5BQ4FZB7 885 aa20.06■□□□□ 0.8
SNX27-203ENST00000368843 MAPKAPK5Q8IW41 473 aa20.06■□□□□ 0.8
SNX27-203ENST00000368843 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.06■□□□□ 0.8
SNX27-203ENST00000368843 GPR162Q16538 588 aa20.06■□□□□ 0.8
SNX27-203ENST00000368843 G2E3Q7L622 706 aa20.06■□□□□ 0.8
SNX27-203ENST00000368843 PPANQ9NQ55 473 aaKnown RBP20.06■□□□□ 0.8
SNX27-203ENST00000368843 JAKMIP2Q96AA8 810 aa20.06■□□□□ 0.8
SNX27-203ENST00000368843 TRIM7Q9C029 511 aa20.05■□□□□ 0.8
SNX27-203ENST00000368843 GPAA1O43292 621 aa20.05■□□□□ 0.8
SNX27-203ENST00000368843 ADCY7P51828 1080 aa20.05■□□□□ 0.8
SNX27-203ENST00000368843 NSMFQ6X4W1 530 aa20.05■□□□□ 0.8
SNX27-203ENST00000368843 PLEKHM2Q8IWE5 1019 aa20.05■□□□□ 0.8
SNX27-203ENST00000368843 DKC1O60832 514 aaKnown RBP eCLIP20.05■□□□□ 0.8
SNX27-203ENST00000368843 ASIC2Q16515 512 aa20.05■□□□□ 0.8
SNX27-203ENST00000368843 FMNL3Q8IVF7 1028 aa20.05■□□□□ 0.8
SNX27-203ENST00000368843 ZEB2O60315 1214 aa20.05■□□□□ 0.8
SNX27-203ENST00000368843 BIRC2Q13490 618 aa20.05■□□□□ 0.8
SNX27-203ENST00000368843 NOLC1Q14978 699 aaKnown RBP eCLIP20.05■□□□□ 0.8
SNX27-203ENST00000368843 TMEM87BQ96K49 555 aa20.05■□□□□ 0.8
SNX27-203ENST00000368843 ORAI2Q96SN7 254 aa20.05■□□□□ 0.8
SNX27-203ENST00000368843 SLC52A2Q9HAB3 445 aa20.05■□□□□ 0.8
SNX27-203ENST00000368843 HGSO14964 777 aaPredicted RBP20.04■□□□□ 0.8
SNX27-203ENST00000368843 CFBP00751 764 aa20.04■□□□□ 0.8
SNX27-203ENST00000368843 CALCOCO2Q13137 446 aa20.04■□□□□ 0.8
SNX27-203ENST00000368843 TRAPPC8Q9Y2L5 1435 aa20.04■□□□□ 0.8
SNX27-203ENST00000368843 LIN9Q5TKA1 542 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms