RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 PHIPQ8WWQ0 1821 aa19.81■□□□□ 0.76
CKS1B-202ENST00000368436 CENPFP49454 3210 aa19.8■□□□□ 0.76
CKS1B-202ENST00000368436 DOCK1Q14185 1865 aa19.8■□□□□ 0.76
CKS1B-202ENST00000368436 GPR75-ASB3A0A0A6YYF3 556 aa19.8■□□□□ 0.76
CKS1B-202ENST00000368436 BTDP43251 543 aa19.8■□□□□ 0.76
CKS1B-202ENST00000368436 PRMT2P55345 433 aa19.8■□□□□ 0.76
CKS1B-202ENST00000368436 MECOMQ03112 1051 aa19.8■□□□□ 0.76
CKS1B-202ENST00000368436 ERICH6Q7L0X2 663 aa19.8■□□□□ 0.76
CKS1B-202ENST00000368436 SCYL3Q8IZE3 742 aa19.8■□□□□ 0.76
CKS1B-202ENST00000368436 ZNF384Q8TF68 577 aa19.8■□□□□ 0.76
CKS1B-202ENST00000368436 NEUROD6Q96NK8 337 aa19.8■□□□□ 0.76
CKS1B-202ENST00000368436 TMEM106CQ9BVX2 250 aa19.8■□□□□ 0.76
CKS1B-202ENST00000368436 DDX4Q9NQI0 724 aaKnown RBP19.8■□□□□ 0.76
CKS1B-202ENST00000368436 PTPRFP10586 1907 aa19.8■□□□□ 0.76
CKS1B-202ENST00000368436 PNMA6EA0A0J9YXQ4 647 aa19.79■□□□□ 0.76
CKS1B-202ENST00000368436 DDTLA6NHG4 134 aaPredicted RBP19.79■□□□□ 0.76
CKS1B-202ENST00000368436 RHBDL3P58872 404 aa19.79■□□□□ 0.76
CKS1B-202ENST00000368436 GPAT2Q6NUI2 795 aa19.79■□□□□ 0.76
CKS1B-202ENST00000368436 FRAT1Q92837 279 aaPredicted RBP19.79■□□□□ 0.76
CKS1B-202ENST00000368436 CPA4Q9UI42 421 aa19.79■□□□□ 0.76
CKS1B-202ENST00000368436 MGAMO43451 1857 aa19.78■□□□□ 0.76
CKS1B-202ENST00000368436 NPM3O75607 178 aaKnown RBP19.78■□□□□ 0.76
CKS1B-202ENST00000368436 PTPRAP18433 802 aa19.78■□□□□ 0.76
CKS1B-202ENST00000368436 CTGFP29279 349 aa19.78■□□□□ 0.76
CKS1B-202ENST00000368436 ARID4AP29374 1257 aaPredicted RBP19.78■□□□□ 0.76
CKS1B-202ENST00000368436 ZSCAN29Q8IWY8 852 aaPredicted RBP19.78■□□□□ 0.76
CKS1B-202ENST00000368436 SPATA5Q8NB90 893 aa19.78■□□□□ 0.76
CKS1B-202ENST00000368436 CLUAP1Q96AJ1 413 aa19.78■□□□□ 0.76
CKS1B-202ENST00000368436 MAP4K4O95819 1239 aaPredicted RBP19.77■□□□□ 0.76
CKS1B-202ENST00000368436 G3BP1Q13283 466 aaKnown RBP eCLIP19.77■□□□□ 0.76
CKS1B-202ENST00000368436 NSUN4Q96CB9 384 aaKnown RBP19.77■□□□□ 0.76
CKS1B-202ENST00000368436 PICK1Q9NRD5 415 aa19.77■□□□□ 0.76
CKS1B-202ENST00000368436 AFG3L2Q9Y4W6 797 aa19.77■□□□□ 0.76
CKS1B-202ENST00000368436 ZHX2Q9Y6X8 837 aa19.77■□□□□ 0.76
CKS1B-202ENST00000368436 A0A0G2JLL6 359 aaPredicted RBP19.76■□□□□ 0.75
CKS1B-202ENST00000368436 TBC1D12O60347 775 aa19.76■□□□□ 0.75
CKS1B-202ENST00000368436 CTNND1O60716 968 aaKnown RBP19.76■□□□□ 0.75
CKS1B-202ENST00000368436 SLURP2P0DP57 97 aa19.76■□□□□ 0.75
CKS1B-202ENST00000368436 PSMC4P43686 418 aa19.76■□□□□ 0.75
CKS1B-202ENST00000368436 GSTO1P78417 241 aa19.76■□□□□ 0.75
CKS1B-202ENST00000368436 PICALMQ13492 652 aa19.76■□□□□ 0.75
CKS1B-202ENST00000368436 GORABQ5T7V8 394 aa19.76■□□□□ 0.75
CKS1B-202ENST00000368436 PI16Q6UXB8 463 aa19.76■□□□□ 0.75
CKS1B-202ENST00000368436 PRRT2Q7Z6L0 340 aaPredicted RBP19.76■□□□□ 0.75
CKS1B-202ENST00000368436 TMEM57Q8N5G2 664 aa19.76■□□□□ 0.75
CKS1B-202ENST00000368436 SH3TC2Q8TF17 1288 aa19.76■□□□□ 0.75
CKS1B-202ENST00000368436 TRIM47Q96LD4 638 aa19.76■□□□□ 0.75
CKS1B-202ENST00000368436 PARK7Q99497 189 aaKnown RBP19.76■□□□□ 0.75
CKS1B-202ENST00000368436 SRRDQ9UH36 339 aa19.76■□□□□ 0.75
CKS1B-202ENST00000368436 LDHCP07864 332 aa19.75■□□□□ 0.75
CKS1B-202ENST00000368436 BCRP11274 1271 aa19.75■□□□□ 0.75
CKS1B-202ENST00000368436 ZKSCAN2Q63HK3 967 aa19.75■□□□□ 0.75
CKS1B-202ENST00000368436 TBC1D9Q6ZT07 1266 aa19.75■□□□□ 0.75
CKS1B-202ENST00000368436 FASTKD5Q7L8L6 764 aaKnown RBP19.75■□□□□ 0.75
CKS1B-202ENST00000368436 COL2A1P02458 1487 aaPredicted RBP19.74■□□□□ 0.75
CKS1B-202ENST00000368436 UQCRFS1P1P0C7P4 283 aa19.74■□□□□ 0.75
CKS1B-202ENST00000368436 OSBPP22059 807 aa19.74■□□□□ 0.75
CKS1B-202ENST00000368436 HOXD10P28358 340 aa19.74■□□□□ 0.75
CKS1B-202ENST00000368436 MCAMP43121 646 aa19.74■□□□□ 0.75
CKS1B-202ENST00000368436 POLA2Q14181 598 aa19.74■□□□□ 0.75
CKS1B-202ENST00000368436 SLC4A8Q2Y0W8 1093 aa19.74■□□□□ 0.75
CKS1B-202ENST00000368436 GPR108Q9NPR9 543 aa19.74■□□□□ 0.75
CKS1B-202ENST00000368436 SLC45A1Q9Y2W3 748 aa19.74■□□□□ 0.75
CKS1B-202ENST00000368436 BRCA2P51587 3418 aa19.74■□□□□ 0.75
CKS1B-202ENST00000368436 CYP2C8P10632 490 aa19.73■□□□□ 0.75
CKS1B-202ENST00000368436 SSH3Q8TE77 659 aa19.73■□□□□ 0.75
CKS1B-202ENST00000368436 ATAD5Q96QE3 1844 aa19.73■□□□□ 0.75
CKS1B-202ENST00000368436 ECM2O94769 699 aaPredicted RBP19.72■□□□□ 0.75
CKS1B-202ENST00000368436 FMNL1O95466 1100 aaPredicted RBP19.72■□□□□ 0.75
CKS1B-202ENST00000368436 ATP8B2P98198 1209 aa19.72■□□□□ 0.75
CKS1B-202ENST00000368436 GCC1Q96CN9 775 aa19.72■□□□□ 0.75
CKS1B-202ENST00000368436 RAI14Q9P0K7 980 aa19.72■□□□□ 0.75
CKS1B-202ENST00000368436 MAST2Q6P0Q8 1798 aa19.72■□□□□ 0.75
CKS1B-202ENST00000368436 CDK5RAP2Q96SN8 1893 aa19.71■□□□□ 0.75
CKS1B-202ENST00000368436 MKI67P46013 3256 aaKnown RBP19.71■□□□□ 0.75
CKS1B-202ENST00000368436 MYCP01106 439 aaPredicted RBP19.71■□□□□ 0.75
CKS1B-202ENST00000368436 GADL1Q6ZQY3 521 aa19.71■□□□□ 0.75
CKS1B-202ENST00000368436 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.71■□□□□ 0.75
CKS1B-202ENST00000368436 PCDH10Q9P2E7 1040 aa19.71■□□□□ 0.75
CKS1B-202ENST00000368436 MYPNQ86TC9 1320 aa19.71■□□□□ 0.75
CKS1B-202ENST00000368436 MYO5AQ9Y4I1 1855 aaKnown RBP19.71■□□□□ 0.75
CKS1B-202ENST00000368436 FCGRTP55899 365 aa19.7■□□□□ 0.74
CKS1B-202ENST00000368436 TNNI3KQ59H18 835 aa19.7■□□□□ 0.74
CKS1B-202ENST00000368436 OSBPL5Q9H0X9 879 aaPredicted RBP19.7■□□□□ 0.74
CKS1B-202ENST00000368436 LRP2BPQ9P2M1 347 aa19.7■□□□□ 0.74
CKS1B-202ENST00000368436 FPGT-TNNI3KV9GXZ4 949 aa19.7■□□□□ 0.74
CKS1B-202ENST00000368436 SIPA1L1O43166 1804 aa19.69■□□□□ 0.74
CKS1B-202ENST00000368436 FOCADQ5VW36 1801 aa19.69■□□□□ 0.74
CKS1B-202ENST00000368436 GRK4P32298 578 aa19.69■□□□□ 0.74
CKS1B-202ENST00000368436 MTFR1Q15390 333 aa19.69■□□□□ 0.74
CKS1B-202ENST00000368436 RAET1EQ8TD07 263 aa19.69■□□□□ 0.74
CKS1B-202ENST00000368436 ZNF512BQ96KM6 892 aaPredicted RBP19.69■□□□□ 0.74
CKS1B-202ENST00000368436 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.69■□□□□ 0.74
CKS1B-202ENST00000368436 LOC285556D6RIA3 1793 aa19.69■□□□□ 0.74
CKS1B-202ENST00000368436 TRIM75PA6NK02 468 aa19.68■□□□□ 0.74
CKS1B-202ENST00000368436 FAM196BA6NMK8 535 aa19.68■□□□□ 0.74
CKS1B-202ENST00000368436 CCDC158Q5M9N0 1113 aa19.68■□□□□ 0.74
CKS1B-202ENST00000368436 TTC39AQ5SRH9 613 aa19.68■□□□□ 0.74
CKS1B-202ENST00000368436 CCDC84Q86UT8 332 aaPredicted RBP19.68■□□□□ 0.74
CKS1B-202ENST00000368436 TEX11Q8IYF3 940 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms