RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 DNAJC18Q9H819 358 aa11.02□□□□□ -0.65
CNIH4-202ENST00000366857 ATP8A2Q9NTI2 1148 aa11.02□□□□□ -0.65
CNIH4-202ENST00000366857 CTNNA3Q9UI47 895 aa11.02□□□□□ -0.65
CNIH4-202ENST00000366857 TAOK2Q9UL54 1235 aa11.02□□□□□ -0.65
CNIH4-202ENST00000366857 ZNF330Q9Y3S2 320 aaPredicted RBP11.02□□□□□ -0.65
CNIH4-202ENST00000366857 PPEF1O14829 653 aaPredicted RBP11.01□□□□□ -0.65
CNIH4-202ENST00000366857 APOBEC3HQ6NTF7 200 aaKnown RBP11.01□□□□□ -0.65
CNIH4-202ENST00000366857 CNTNAP1P78357 1384 aa11.01□□□□□ -0.65
CNIH4-202ENST00000366857 ZKSCAN1P17029 563 aaPredicted RBP11.01□□□□□ -0.65
CNIH4-202ENST00000366857 DACT2Q5SW24 774 aa11.01□□□□□ -0.65
CNIH4-202ENST00000366857 ENAHQ8N8S7 591 aaPredicted RBP11.01□□□□□ -0.65
CNIH4-202ENST00000366857 SPRYD3Q8NCJ5 442 aa11.01□□□□□ -0.65
CNIH4-202ENST00000366857 MASTLQ96GX5 879 aa11.01□□□□□ -0.65
CNIH4-202ENST00000366857 WDHD1O75717 1129 aaPredicted RBP11.01□□□□□ -0.65
CNIH4-202ENST00000366857 APBA3O96018 575 aa11.01□□□□□ -0.65
CNIH4-202ENST00000366857 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.01□□□□□ -0.65
CNIH4-202ENST00000366857 SSC5DA1L4H1 1573 aa11.01□□□□□ -0.65
CNIH4-202ENST00000366857 WDR33Q9C0J8 1336 aaKnown RBP11.01□□□□□ -0.65
CNIH4-202ENST00000366857 NASPP49321 788 aaPredicted RBP11.01□□□□□ -0.65
CNIH4-202ENST00000366857 CTDSPL2Q05D32 466 aa11.01□□□□□ -0.65
CNIH4-202ENST00000366857 MAP3K12Q12852 859 aa11.01□□□□□ -0.65
CNIH4-202ENST00000366857 C16orf86Q6ZW13 317 aa11.01□□□□□ -0.65
CNIH4-202ENST00000366857 SH3BP5LQ7L8J4 393 aa11.01□□□□□ -0.65
CNIH4-202ENST00000366857 TTC6Q86TZ1 520 aa11.01□□□□□ -0.65
CNIH4-202ENST00000366857 BRF1Q92994 677 aa11.01□□□□□ -0.65
CNIH4-202ENST00000366857 PDLIM2Q96JY6 352 aa11.01□□□□□ -0.65
CNIH4-202ENST00000366857 GPR101Q96P66 508 aaPredicted RBP11.01□□□□□ -0.65
CNIH4-202ENST00000366857 RCOR1Q9UKL0 485 aa11.01□□□□□ -0.65
CNIH4-202ENST00000366857 NCOA7Q8NI08 942 aa11□□□□□ -0.65
CNIH4-202ENST00000366857 VPS33BQ9H267 617 aa11□□□□□ -0.65
CNIH4-202ENST00000366857 TFCP2L1Q9NZI6 479 aa11□□□□□ -0.65
CNIH4-202ENST00000366857 ANGEL1Q9UNK9 670 aaKnown RBP11□□□□□ -0.65
CNIH4-202ENST00000366857 DOCK5Q9H7D0 1870 aa11□□□□□ -0.65
CNIH4-202ENST00000366857 PRC1O43663 620 aa11□□□□□ -0.65
CNIH4-202ENST00000366857 MCM5P33992 734 aa11□□□□□ -0.65
CNIH4-202ENST00000366857 KIAA1211Q6ZU35 1233 aa11□□□□□ -0.65
CNIH4-202ENST00000366857 USP48Q86UV5 1035 aa11□□□□□ -0.65
CNIH4-202ENST00000366857 SIAH1Q8IUQ4 282 aa11□□□□□ -0.65
CNIH4-202ENST00000366857 SH3RF3Q8TEJ3 882 aaPredicted RBP11□□□□□ -0.65
CNIH4-202ENST00000366857 MTMR8Q96EF0 704 aa11□□□□□ -0.65
CNIH4-202ENST00000366857 PSMD1Q99460 953 aa11□□□□□ -0.65
CNIH4-202ENST00000366857 KCNQ5Q9NR82 932 aa11□□□□□ -0.65
CNIH4-202ENST00000366857 SCN4AP35499 1836 aa11□□□□□ -0.65
CNIH4-202ENST00000366857 FMNL1O95466 1100 aaPredicted RBP11□□□□□ -0.65
CNIH4-202ENST00000366857 TOB1P50616 345 aaPredicted RBP11□□□□□ -0.65
CNIH4-202ENST00000366857 SDR42E1Q8WUS8 393 aa11□□□□□ -0.65
CNIH4-202ENST00000366857 COA1Q9GZY4 146 aa11□□□□□ -0.65
CNIH4-202ENST00000366857 DTNBO60941 627 aa10.99□□□□□ -0.65
CNIH4-202ENST00000366857 IMMTQ16891 758 aaKnown RBP10.99□□□□□ -0.65
CNIH4-202ENST00000366857 DDX4Q9NQI0 724 aaKnown RBP10.99□□□□□ -0.65
CNIH4-202ENST00000366857 CNTNAP5Q8WYK1 1306 aa10.99□□□□□ -0.65
CNIH4-202ENST00000366857 LRRFIP1Q32MZ4 808 aaKnown RBP10.99□□□□□ -0.65
CNIH4-202ENST00000366857 BICDL1Q6ZP65 573 aa10.99□□□□□ -0.65
CNIH4-202ENST00000366857 HPSEQ9Y251 543 aa10.99□□□□□ -0.65
CNIH4-202ENST00000366857 FLT1P17948 1338 aa10.99□□□□□ -0.65
CNIH4-202ENST00000366857 IFNAR1P17181 557 aa10.99□□□□□ -0.65
CNIH4-202ENST00000366857 ST5P78524 1137 aa10.99□□□□□ -0.65
CNIH4-202ENST00000366857 AXDND1Q5T1B0 1012 aaPredicted RBP10.99□□□□□ -0.65
CNIH4-202ENST00000366857 MTMR14Q8NCE2 650 aa10.99□□□□□ -0.65
CNIH4-202ENST00000366857 UPF1Q92900 1129 aaKnown RBP eCLIP10.99□□□□□ -0.65
CNIH4-202ENST00000366857 MMP10P09238 476 aa10.98□□□□□ -0.65
CNIH4-202ENST00000366857 PLCD1P51178 756 aa10.98□□□□□ -0.65
CNIH4-202ENST00000366857 HHIPL2Q6UWX4 724 aa10.98□□□□□ -0.65
CNIH4-202ENST00000366857 LRRC2Q9BYS8 371 aa10.98□□□□□ -0.65
CNIH4-202ENST00000366857 FAM177BA6PVY3 158 aa10.98□□□□□ -0.65
CNIH4-202ENST00000366857 ZNF213O14771 459 aa10.98□□□□□ -0.65
CNIH4-202ENST00000366857 GUCY1A2P33402 732 aa10.98□□□□□ -0.65
CNIH4-202ENST00000366857 CHST3Q7LGC8 479 aa10.98□□□□□ -0.65
CNIH4-202ENST00000366857 IDI2Q9BXS1 227 aa10.98□□□□□ -0.65
CNIH4-202ENST00000366857 LTBP3Q9NS15 1303 aa10.98□□□□□ -0.65
CNIH4-202ENST00000366857 MAGEB6P1A0A0J9YX57 407 aa10.98□□□□□ -0.65
CNIH4-202ENST00000366857 PTPDC1A2A3K4 754 aa10.98□□□□□ -0.65
CNIH4-202ENST00000366857 TATDN1Q6P1N9 297 aa10.98□□□□□ -0.65
CNIH4-202ENST00000366857 FBXO18Q8NFZ0 1043 aa10.98□□□□□ -0.65
CNIH4-202ENST00000366857 WDR66Q8TBY9 1149 aa10.98□□□□□ -0.65
CNIH4-202ENST00000366857 ZDHHC15Q96MV8 337 aa10.98□□□□□ -0.65
CNIH4-202ENST00000366857 NCOA5Q9HCD5 579 aaKnown RBP10.98□□□□□ -0.65
CNIH4-202ENST00000366857 FOXD4L1Q9NU39 408 aa10.98□□□□□ -0.65
CNIH4-202ENST00000366857 CNPY2Q9Y2B0 182 aa10.98□□□□□ -0.65
CNIH4-202ENST00000366857 POLR2AP24928 1970 aaKnown RBP10.97□□□□□ -0.65
CNIH4-202ENST00000366857 XRCC6P12956 609 aaKnown RBP eCLIP10.97□□□□□ -0.65
CNIH4-202ENST00000366857 RASA1P20936 1047 aa10.97□□□□□ -0.65
CNIH4-202ENST00000366857 HDLBPQ00341 1268 aaKnown RBP10.97□□□□□ -0.65
CNIH4-202ENST00000366857 ZSCAN23Q3MJ62 389 aa10.97□□□□□ -0.65
CNIH4-202ENST00000366857 MAD2L2Q9UI95 211 aa10.97□□□□□ -0.65
CNIH4-202ENST00000366857 ISY1Q9ULR0 285 aaKnown RBP10.97□□□□□ -0.65
CNIH4-202ENST00000366857 DAGLAQ9Y4D2 1042 aa10.97□□□□□ -0.65
CNIH4-202ENST00000366857 CYP2D7A0A087X1C5 515 aa10.97□□□□□ -0.65
CNIH4-202ENST00000366857 C4orf32Q8N8J7 132 aa10.97□□□□□ -0.65
CNIH4-202ENST00000366857 PHF20Q9BVI0 1012 aa10.97□□□□□ -0.65
CNIH4-202ENST00000366857 EHD4Q9H223 541 aa10.97□□□□□ -0.65
CNIH4-202ENST00000366857 B4E1Z4 1266 aa10.97□□□□□ -0.65
CNIH4-202ENST00000366857 CYP2D6P10635 497 aa10.97□□□□□ -0.65
CNIH4-202ENST00000366857 PDE6BP35913 854 aa10.97□□□□□ -0.65
CNIH4-202ENST00000366857 EN1Q05925 392 aaPredicted RBP10.97□□□□□ -0.65
CNIH4-202ENST00000366857 ELOA2Q8IYF1 753 aaPredicted RBP10.97□□□□□ -0.65
CNIH4-202ENST00000366857 CNNM2Q9H8M5 875 aa10.97□□□□□ -0.65
CNIH4-202ENST00000366857 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.97□□□□□ -0.65
CNIH4-202ENST00000366857 ARPP21Q9UBL0 812 aaPredicted RBP10.97□□□□□ -0.65
CNIH4-202ENST00000366857 KIF23Q02241 960 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms