RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 ERICH6Q7L0X2 663 aa10.1□□□□□ -0.79
RNU4-59P-201ENST00000364447 ZFPM1Q8IX07 1006 aa10.1□□□□□ -0.79
RNU4-59P-201ENST00000364447 CLUAP1Q96AJ1 413 aa10.1□□□□□ -0.79
RNU4-59P-201ENST00000364447 CPA4Q9UI42 421 aa10.1□□□□□ -0.79
RNU4-59P-201ENST00000364447 MGAMO43451 1857 aa10.1□□□□□ -0.79
RNU4-59P-201ENST00000364447 RFX7Q2KHR2 1363 aa10.1□□□□□ -0.79
RNU4-59P-201ENST00000364447 ATRNL1Q5VV63 1379 aa10.1□□□□□ -0.79
RNU4-59P-201ENST00000364447 MAST2Q6P0Q8 1798 aa10.09□□□□□ -0.79
RNU4-59P-201ENST00000364447 CXCL11O14625 94 aa10.09□□□□□ -0.79
RNU4-59P-201ENST00000364447 BCAR3O75815 825 aa10.09□□□□□ -0.79
RNU4-59P-201ENST00000364447 MYCP01106 439 aaPredicted RBP10.09□□□□□ -0.79
RNU4-59P-201ENST00000364447 GSTO1P78417 241 aa10.09□□□□□ -0.79
RNU4-59P-201ENST00000364447 MECOMQ03112 1051 aa10.09□□□□□ -0.79
RNU4-59P-201ENST00000364447 G3BP1Q13283 466 aaKnown RBP eCLIP10.09□□□□□ -0.79
RNU4-59P-201ENST00000364447 SCYL3Q8IZE3 742 aa10.09□□□□□ -0.79
RNU4-59P-201ENST00000364447 SH3TC2Q8TF17 1288 aa10.09□□□□□ -0.79
RNU4-59P-201ENST00000364447 GCC1Q96CN9 775 aa10.09□□□□□ -0.79
RNU4-59P-201ENST00000364447 FAM163AQ96GL9 167 aaPredicted RBP10.09□□□□□ -0.79
RNU4-59P-201ENST00000364447 PARK7Q99497 189 aaKnown RBP10.09□□□□□ -0.79
RNU4-59P-201ENST00000364447 PHIPQ8WWQ0 1821 aa10.09□□□□□ -0.79
RNU4-59P-201ENST00000364447 ATAD5Q96QE3 1844 aa10.09□□□□□ -0.79
RNU4-59P-201ENST00000364447 PNMA6EA0A0J9YXQ4 647 aa10.08□□□□□ -0.8
RNU4-59P-201ENST00000364447 DDTLA6NHG4 134 aaPredicted RBP10.08□□□□□ -0.8
RNU4-59P-201ENST00000364447 PHF20L1A8MW92 1017 aa10.08□□□□□ -0.8
RNU4-59P-201ENST00000364447 FMNL1O95466 1100 aaPredicted RBP10.08□□□□□ -0.8
RNU4-59P-201ENST00000364447 LDHCP07864 332 aa10.08□□□□□ -0.8
RNU4-59P-201ENST00000364447 PTPRAP18433 802 aa10.08□□□□□ -0.8
RNU4-59P-201ENST00000364447 HOXD10P28358 340 aa10.08□□□□□ -0.8
RNU4-59P-201ENST00000364447 PSMC4P43686 418 aa10.08□□□□□ -0.8
RNU4-59P-201ENST00000364447 OS9Q13438 667 aaPredicted RBP10.08□□□□□ -0.8
RNU4-59P-201ENST00000364447 C17orf99Q6UX52 265 aa10.08□□□□□ -0.8
RNU4-59P-201ENST00000364447 GADL1Q6ZQY3 521 aa10.08□□□□□ -0.8
RNU4-59P-201ENST00000364447 SH3BP5LQ7L8J4 393 aa10.08□□□□□ -0.8
RNU4-59P-201ENST00000364447 FASTKD5Q7L8L6 764 aaKnown RBP10.08□□□□□ -0.8
RNU4-59P-201ENST00000364447 SPATA5Q8NB90 893 aa10.08□□□□□ -0.8
RNU4-59P-201ENST00000364447 RAET1EQ8TD07 263 aa10.08□□□□□ -0.8
RNU4-59P-201ENST00000364447 TRIM47Q96LD4 638 aa10.08□□□□□ -0.8
RNU4-59P-201ENST00000364447 DDX4Q9NQI0 724 aaKnown RBP10.08□□□□□ -0.8
RNU4-59P-201ENST00000364447 RAI14Q9P0K7 980 aa10.08□□□□□ -0.8
RNU4-59P-201ENST00000364447 HMG20BQ9P0W2 317 aa10.08□□□□□ -0.8
RNU4-59P-201ENST00000364447 TNNQ9UQP3 1299 aa10.08□□□□□ -0.8
RNU4-59P-201ENST00000364447 ZHX2Q9Y6X8 837 aa10.08□□□□□ -0.8
RNU4-59P-201ENST00000364447 ADGRA2Q96PE1 1338 aa10.07□□□□□ -0.8
RNU4-59P-201ENST00000364447 GPR75-ASB3A0A0A6YYF3 556 aa10.07□□□□□ -0.8
RNU4-59P-201ENST00000364447 CTNND1O60716 968 aaKnown RBP10.07□□□□□ -0.8
RNU4-59P-201ENST00000364447 UQCRFS1P1P0C7P4 283 aa10.07□□□□□ -0.8
RNU4-59P-201ENST00000364447 CYP2C8P10632 490 aa10.07□□□□□ -0.8
RNU4-59P-201ENST00000364447 OSBPP22059 807 aa10.07□□□□□ -0.8
RNU4-59P-201ENST00000364447 ARID4AP29374 1257 aaPredicted RBP10.07□□□□□ -0.8
RNU4-59P-201ENST00000364447 MOGSQ13724 837 aa10.07□□□□□ -0.8
RNU4-59P-201ENST00000364447 ZKSCAN2Q63HK3 967 aa10.07□□□□□ -0.8
RNU4-59P-201ENST00000364447 PI16Q6UXB8 463 aa10.07□□□□□ -0.8
RNU4-59P-201ENST00000364447 NOL10Q9BSC4 688 aaKnown RBP10.07□□□□□ -0.8
RNU4-59P-201ENST00000364447 LRP2BPQ9P2M1 347 aa10.07□□□□□ -0.8
RNU4-59P-201ENST00000364447 SRRDQ9UH36 339 aa10.07□□□□□ -0.8
RNU4-59P-201ENST00000364447 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.07□□□□□ -0.8
RNU4-59P-201ENST00000364447 CENPFP49454 3210 aa10.07□□□□□ -0.8
RNU4-59P-201ENST00000364447 MYPNQ86TC9 1320 aa10.07□□□□□ -0.8
RNU4-59P-201ENST00000364447 COL2A1P02458 1487 aaPredicted RBP10.06□□□□□ -0.8
RNU4-59P-201ENST00000364447 A0A0G2JLL6 359 aaPredicted RBP10.06□□□□□ -0.8
RNU4-59P-201ENST00000364447 TRIM75PA6NK02 468 aa10.06□□□□□ -0.8
RNU4-59P-201ENST00000364447 MAP4K4O95819 1239 aaPredicted RBP10.06□□□□□ -0.8
RNU4-59P-201ENST00000364447 GRK4P32298 578 aa10.06□□□□□ -0.8
RNU4-59P-201ENST00000364447 FCGRTP55899 365 aa10.06□□□□□ -0.8
RNU4-59P-201ENST00000364447 RHBDL3P58872 404 aa10.06□□□□□ -0.8
RNU4-59P-201ENST00000364447 MAP3K10Q02779 954 aa10.06□□□□□ -0.8
RNU4-59P-201ENST00000364447 GPAT2Q6NUI2 795 aa10.06□□□□□ -0.8
RNU4-59P-201ENST00000364447 TBC1D9Q6ZT07 1266 aa10.06□□□□□ -0.8
RNU4-59P-201ENST00000364447 PRRT2Q7Z6L0 340 aaPredicted RBP10.06□□□□□ -0.8
RNU4-59P-201ENST00000364447 FTSJ3Q8IY81 847 aaKnown RBP10.06□□□□□ -0.8
RNU4-59P-201ENST00000364447 TMEM57Q8N5G2 664 aa10.06□□□□□ -0.8
RNU4-59P-201ENST00000364447 SMCR8Q8TEV9 937 aaPredicted RBP10.06□□□□□ -0.8
RNU4-59P-201ENST00000364447 NSUN4Q96CB9 384 aaKnown RBP10.06□□□□□ -0.8
RNU4-59P-201ENST00000364447 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.06□□□□□ -0.8
RNU4-59P-201ENST00000364447 BIN2Q9UBW5 565 aaPredicted RBP10.06□□□□□ -0.8
RNU4-59P-201ENST00000364447 AFG3L2Q9Y4W6 797 aa10.06□□□□□ -0.8
RNU4-59P-201ENST00000364447 CDK5RAP2Q96SN8 1893 aa10.06□□□□□ -0.8
RNU4-59P-201ENST00000364447 FOCADQ5VW36 1801 aa10.05□□□□□ -0.8
RNU4-59P-201ENST00000364447 MYO5AQ9Y4I1 1855 aaKnown RBP10.05□□□□□ -0.8
RNU4-59P-201ENST00000364447 FAM196BA6NMK8 535 aa10.05□□□□□ -0.8
RNU4-59P-201ENST00000364447 NPM3O75607 178 aaKnown RBP10.05□□□□□ -0.8
RNU4-59P-201ENST00000364447 SLURP2P0DP57 97 aa10.05□□□□□ -0.8
RNU4-59P-201ENST00000364447 BCRP11274 1271 aa10.05□□□□□ -0.8
RNU4-59P-201ENST00000364447 CTGFP29279 349 aa10.05□□□□□ -0.8
RNU4-59P-201ENST00000364447 MCAMP43121 646 aa10.05□□□□□ -0.8
RNU4-59P-201ENST00000364447 HNRNPUQ00839 825 aaKnown RBP eCLIP10.05□□□□□ -0.8
RNU4-59P-201ENST00000364447 CCDC158Q5M9N0 1113 aa10.05□□□□□ -0.8
RNU4-59P-201ENST00000364447 TTC39AQ5SRH9 613 aa10.05□□□□□ -0.8
RNU4-59P-201ENST00000364447 TEX11Q8IYF3 940 aa10.05□□□□□ -0.8
RNU4-59P-201ENST00000364447 ZNF384Q8TF68 577 aa10.05□□□□□ -0.8
RNU4-59P-201ENST00000364447 SLC45A1Q9Y2W3 748 aa10.05□□□□□ -0.8
RNU4-59P-201ENST00000364447 LOC285556D6RIA3 1793 aa10.05□□□□□ -0.8
RNU4-59P-201ENST00000364447 TBC1D12O60347 775 aa10.04□□□□□ -0.8
RNU4-59P-201ENST00000364447 BAG3O95817 575 aa10.04□□□□□ -0.8
RNU4-59P-201ENST00000364447 UBXN2AP68543 259 aa10.04□□□□□ -0.8
RNU4-59P-201ENST00000364447 PRKCZQ05513 592 aa10.04□□□□□ -0.8
RNU4-59P-201ENST00000364447 TNNI3KQ59H18 835 aa10.04□□□□□ -0.8
RNU4-59P-201ENST00000364447 NAA16Q6N069 864 aaPredicted RBP10.04□□□□□ -0.8
RNU4-59P-201ENST00000364447 CCDC84Q86UT8 332 aaPredicted RBP10.04□□□□□ -0.8
RNU4-59P-201ENST00000364447 ITPRIPQ8IWB1 547 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms