RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 CCSER2Q9H7U1 834 aa6.97□□□□□ -1.29
RNU6-560P-201ENST00000364007 SUGCTQ9HAC7 445 aa6.97□□□□□ -1.29
RNU6-560P-201ENST00000364007 SUPT16HQ9Y5B9 1047 aaKnown RBP6.97□□□□□ -1.29
RNU6-560P-201ENST00000364007 CILPO75339 1184 aa6.96□□□□□ -1.3
RNU6-560P-201ENST00000364007 TIAF1O95411 115 aa6.96□□□□□ -1.3
RNU6-560P-201ENST00000364007 ADH5P11766 374 aa6.96□□□□□ -1.3
RNU6-560P-201ENST00000364007 CRKP46108 304 aa6.96□□□□□ -1.3
RNU6-560P-201ENST00000364007 PREPP48147 710 aa6.96□□□□□ -1.3
RNU6-560P-201ENST00000364007 FDX2Q6P4F2 183 aa6.96□□□□□ -1.3
RNU6-560P-201ENST00000364007 Q6ZS46 218 aa6.96□□□□□ -1.3
RNU6-560P-201ENST00000364007 FAM196AQ6ZSG2 479 aa6.96□□□□□ -1.3
RNU6-560P-201ENST00000364007 DYMQ7RTS9 669 aa6.96□□□□□ -1.3
RNU6-560P-201ENST00000364007 CCDC84Q86UT8 332 aaPredicted RBP6.96□□□□□ -1.3
RNU6-560P-201ENST00000364007 PLPPR2Q96GM1 343 aa6.96□□□□□ -1.3
RNU6-560P-201ENST00000364007 CAPN10Q9HC96 672 aa6.96□□□□□ -1.3
RNU6-560P-201ENST00000364007 AP4E1Q9UPM8 1137 aa6.96□□□□□ -1.3
RNU6-560P-201ENST00000364007 GFRA2O00451 464 aa6.95□□□□□ -1.3
RNU6-560P-201ENST00000364007 GDF11O95390 407 aa6.95□□□□□ -1.3
RNU6-560P-201ENST00000364007 ID3Q02535 119 aa6.95□□□□□ -1.3
RNU6-560P-201ENST00000364007 PPM1JQ5JR12 505 aa6.95□□□□□ -1.3
RNU6-560P-201ENST00000364007 WIPI1Q5MNZ9 446 aaPredicted RBP6.95□□□□□ -1.3
RNU6-560P-201ENST00000364007 ANKRD34AQ69YU3 496 aa6.95□□□□□ -1.3
RNU6-560P-201ENST00000364007 TXNRD3Q86VQ6 643 aa6.95□□□□□ -1.3
RNU6-560P-201ENST00000364007 FANCD2OSQ96PS1 177 aa6.95□□□□□ -1.3
RNU6-560P-201ENST00000364007 NT5C1AQ9BXI3 368 aa6.95□□□□□ -1.3
RNU6-560P-201ENST00000364007 DISC1Q9NRI5 854 aa6.95□□□□□ -1.3
RNU6-560P-201ENST00000364007 CRIM1Q9NZV1 1036 aa6.95□□□□□ -1.3
RNU6-560P-201ENST00000364007 RPL6Q02878 288 aaKnown RBP6.94□□□□□ -1.3
RNU6-560P-201ENST00000364007 PLA2G4EQ3MJ16 856 aa6.94□□□□□ -1.3
RNU6-560P-201ENST00000364007 SEZ6Q53EL9 994 aa6.94□□□□□ -1.3
RNU6-560P-201ENST00000364007 C2CD4AQ8NCU7 369 aaPredicted RBP6.94□□□□□ -1.3
RNU6-560P-201ENST00000364007 ELMO3Q96BJ8 720 aa6.94□□□□□ -1.3
RNU6-560P-201ENST00000364007 INPP5FQ9Y2H2 1132 aa6.94□□□□□ -1.3
RNU6-560P-201ENST00000364007 HIF3AQ9Y2N7 669 aa6.94□□□□□ -1.3
RNU6-560P-201ENST00000364007 ACTL7BQ9Y614 415 aa6.94□□□□□ -1.3
RNU6-560P-201ENST00000364007 SYNGAP1Q96PV0 1343 aa6.94□□□□□ -1.3
RNU6-560P-201ENST00000364007 SART1O43290 800 aaKnown RBP6.93□□□□□ -1.3
RNU6-560P-201ENST00000364007 BPNT1O95861 308 aa6.93□□□□□ -1.3
RNU6-560P-201ENST00000364007 ASPAP45381 313 aa6.93□□□□□ -1.3
RNU6-560P-201ENST00000364007 RANGAP1P46060 587 aaPredicted RBP6.93□□□□□ -1.3
RNU6-560P-201ENST00000364007 RING1Q06587 406 aa6.93□□□□□ -1.3
RNU6-560P-201ENST00000364007 APOBRQ0VD83 1088 aa6.93□□□□□ -1.3
RNU6-560P-201ENST00000364007 MPP2Q14168 576 aa6.93□□□□□ -1.3
RNU6-560P-201ENST00000364007 NAALADL2Q58DX5 795 aa6.93□□□□□ -1.3
RNU6-560P-201ENST00000364007 CYFIP1Q7L576 1253 aa6.93□□□□□ -1.3
RNU6-560P-201ENST00000364007 HDXQ7Z353 690 aa6.93□□□□□ -1.3
RNU6-560P-201ENST00000364007 DZIP1LQ8IYY4 767 aaKnown RBP6.93□□□□□ -1.3
RNU6-560P-201ENST00000364007 TMEM151AQ8N4L1 468 aa6.93□□□□□ -1.3
RNU6-560P-201ENST00000364007 NKD1Q969G9 470 aa6.93□□□□□ -1.3
RNU6-560P-201ENST00000364007 FAM46AQ96IP4 442 aaKnown RBP6.93□□□□□ -1.3
RNU6-560P-201ENST00000364007 TINF2Q9BSI4 451 aa6.93□□□□□ -1.3
RNU6-560P-201ENST00000364007 SSBP4Q9BWG4 385 aaPredicted RBP6.93□□□□□ -1.3
RNU6-560P-201ENST00000364007 CEP41Q9BYV8 373 aa6.93□□□□□ -1.3
RNU6-560P-201ENST00000364007 BRMS1Q9HCU9 246 aa6.93□□□□□ -1.3
RNU6-560P-201ENST00000364007 FAM105AQ9NUU6 356 aa6.93□□□□□ -1.3
RNU6-560P-201ENST00000364007 POLR3KQ9Y2Y1 108 aaPredicted RBP6.93□□□□□ -1.3
RNU6-560P-201ENST00000364007 SNCAIPQ9Y6H5 919 aa6.93□□□□□ -1.3
RNU6-560P-201ENST00000364007 ROBO2Q9HCK4 1378 aa6.93□□□□□ -1.3
RNU6-560P-201ENST00000364007 PRAMEF27A3QJZ7 478 aa6.92□□□□□ -1.3
RNU6-560P-201ENST00000364007 GRIN3BO60391 1043 aa6.92□□□□□ -1.3
RNU6-560P-201ENST00000364007 GATA4P43694 442 aa6.92□□□□□ -1.3
RNU6-560P-201ENST00000364007 GJA8P48165 433 aa6.92□□□□□ -1.3
RNU6-560P-201ENST00000364007 ZC3H6P61129 1189 aaKnown RBP6.92□□□□□ -1.3
RNU6-560P-201ENST00000364007 ERVK-24P63145 666 aa6.92□□□□□ -1.3
RNU6-560P-201ENST00000364007 TTLL4Q14679 1199 aa6.92□□□□□ -1.3
RNU6-560P-201ENST00000364007 CDPF1Q6NVV7 123 aa6.92□□□□□ -1.3
RNU6-560P-201ENST00000364007 REC114Q7Z4M0 266 aa6.92□□□□□ -1.3
RNU6-560P-201ENST00000364007 ARMC10Q8N2F6 343 aa6.92□□□□□ -1.3
RNU6-560P-201ENST00000364007 GSX1Q9H4S2 264 aaPredicted RBP6.92□□□□□ -1.3
RNU6-560P-201ENST00000364007 RNGTTO60942 597 aaKnown RBP6.91□□□□□ -1.3
RNU6-560P-201ENST00000364007 NEFMP07197 916 aa6.91□□□□□ -1.3
RNU6-560P-201ENST00000364007 HCLS1P14317 486 aaPredicted RBP6.91□□□□□ -1.3
RNU6-560P-201ENST00000364007 NTF4P34130 210 aa6.91□□□□□ -1.3
RNU6-560P-201ENST00000364007 HNRNPUQ00839 825 aaKnown RBP eCLIP6.91□□□□□ -1.3
RNU6-560P-201ENST00000364007 SGO2Q562F6 1265 aa6.91□□□□□ -1.3
RNU6-560P-201ENST00000364007 SLITRK4Q8IW52 837 aa6.91□□□□□ -1.3
RNU6-560P-201ENST00000364007 GPRASP2Q96D09 838 aa6.91□□□□□ -1.3
RNU6-560P-201ENST00000364007 LRRC3Q9BY71 257 aa6.91□□□□□ -1.3
RNU6-560P-201ENST00000364007 CORINQ9Y5Q5 1042 aa6.91□□□□□ -1.3
RNU6-560P-201ENST00000364007 GAS2O43903 313 aaKnown RBP6.9□□□□□ -1.3
RNU6-560P-201ENST00000364007 BMP3P12645 472 aa6.9□□□□□ -1.3
RNU6-560P-201ENST00000364007 MCM4P33991 863 aa6.9□□□□□ -1.3
RNU6-560P-201ENST00000364007 USP11P51784 963 aa6.9□□□□□ -1.3
RNU6-560P-201ENST00000364007 UBE3DQ7Z6J8 389 aa6.9□□□□□ -1.3
RNU6-560P-201ENST00000364007 RNF214Q8ND24 703 aa6.9□□□□□ -1.3
RNU6-560P-201ENST00000364007 RASGRP4Q8TDF6 673 aa6.9□□□□□ -1.3
RNU6-560P-201ENST00000364007 FBLIM1Q8WUP2 373 aa6.9□□□□□ -1.3
RNU6-560P-201ENST00000364007 ATXN3LQ9H3M9 355 aa6.9□□□□□ -1.3
RNU6-560P-201ENST00000364007 PICK1Q9NRD5 415 aa6.9□□□□□ -1.3
RNU6-560P-201ENST00000364007 GINM1Q9NU53 330 aa6.9□□□□□ -1.3
RNU6-560P-201ENST00000364007 EFR3BQ9Y2G0 817 aa6.9□□□□□ -1.3
RNU6-560P-201ENST00000364007 RAB6AP20340 208 aa6.89□□□□□ -1.31
RNU6-560P-201ENST00000364007 GRK4P32298 578 aa6.89□□□□□ -1.31
RNU6-560P-201ENST00000364007 CLCQ05315 142 aa6.89□□□□□ -1.31
RNU6-560P-201ENST00000364007 CWF19L2Q2TBE0 894 aaKnown RBP6.89□□□□□ -1.31
RNU6-560P-201ENST00000364007 ZBTB37Q5TC79 503 aa6.89□□□□□ -1.31
RNU6-560P-201ENST00000364007 GK5Q6ZS86 529 aa6.89□□□□□ -1.31
RNU6-560P-201ENST00000364007 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.89□□□□□ -1.31
RNU6-560P-201ENST00000364007 UTP4Q969X6 686 aaKnown RBP6.89□□□□□ -1.31
RNU6-560P-201ENST00000364007 TP53INP1Q96A56 240 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms