RNA–Protein interactions for RNA: ENST00000361427.5

HMGN2-201, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN2, Length 1,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-201ENST00000361427 CAPN12Q6ZSI9 719 aa9.17□□□□□ -0.94
HMGN2-201ENST00000361427 CCDC146Q8IYE0 955 aa9.17□□□□□ -0.94
HMGN2-201ENST00000361427 TTC5Q8N0Z6 440 aa9.17□□□□□ -0.94
HMGN2-201ENST00000361427 VWA5B2Q8N398 1253 aa9.17□□□□□ -0.94
HMGN2-201ENST00000361427 FMNL2Q96PY5 1086 aa9.17□□□□□ -0.94
HMGN2-201ENST00000361427 DNAJC2Q99543 621 aaKnown RBP9.17□□□□□ -0.94
HMGN2-201ENST00000361427 SYT17Q9BSW7 474 aa9.17□□□□□ -0.94
HMGN2-201ENST00000361427 THUMPD2Q9BTF0 503 aaKnown RBP9.17□□□□□ -0.94
HMGN2-201ENST00000361427 FHDC1Q9C0D6 1143 aaPredicted RBP9.17□□□□□ -0.94
HMGN2-201ENST00000361427 CCSER2Q9H7U1 834 aa9.17□□□□□ -0.94
HMGN2-201ENST00000361427 CCDC87Q9NVE4 849 aa9.17□□□□□ -0.94
HMGN2-201ENST00000361427 CUEDC1Q9NWM3 386 aaPredicted RBP9.17□□□□□ -0.94
HMGN2-201ENST00000361427 BRPF3Q9ULD4 1205 aa9.17□□□□□ -0.94
HMGN2-201ENST00000361427 M0R2N6 131 aa9.16□□□□□ -0.94
HMGN2-201ENST00000361427 TREHO43280 583 aa9.16□□□□□ -0.94
HMGN2-201ENST00000361427 GYS1P13807 737 aa9.16□□□□□ -0.94
HMGN2-201ENST00000361427 ATP2B1P20020 1258 aa9.16□□□□□ -0.94
HMGN2-201ENST00000361427 POLD1P28340 1107 aa9.16□□□□□ -0.94
HMGN2-201ENST00000361427 FMR1Q06787 632 aaKnown RBP eCLIP9.16□□□□□ -0.94
HMGN2-201ENST00000361427 USP4Q13107 963 aa9.16□□□□□ -0.94
HMGN2-201ENST00000361427 LDLRAD1Q5T700 205 aa9.16□□□□□ -0.94
HMGN2-201ENST00000361427 MSL1Q68DK7 614 aa9.16□□□□□ -0.94
HMGN2-201ENST00000361427 SH3RF1Q7Z6J0 888 aa9.16□□□□□ -0.94
HMGN2-201ENST00000361427 SLC43A3Q8NBI5 491 aa9.16□□□□□ -0.94
HMGN2-201ENST00000361427 PNISRQ8TF01 805 aaKnown RBP9.16□□□□□ -0.94
HMGN2-201ENST00000361427 RNF34Q969K3 372 aa9.16□□□□□ -0.94
HMGN2-201ENST00000361427 TINF2Q9BSI4 451 aa9.16□□□□□ -0.94
HMGN2-201ENST00000361427 TEX13AQ9BXU3 409 aaPredicted RBP9.16□□□□□ -0.94
HMGN2-201ENST00000361427 TGIF2Q9GZN2 237 aa9.16□□□□□ -0.94
HMGN2-201ENST00000361427 METTL5Q9NRN9 209 aaKnown RBP9.16□□□□□ -0.94
HMGN2-201ENST00000361427 MIS18AQ9NYP9 233 aa9.16□□□□□ -0.94
HMGN2-201ENST00000361427 PRKAG2Q9UGJ0 569 aa9.16□□□□□ -0.94
HMGN2-201ENST00000361427 ZBTB1Q9Y2K1 713 aa9.16□□□□□ -0.94
HMGN2-201ENST00000361427 TMA7Q9Y2S6 64 aaKnown RBP9.16□□□□□ -0.94
HMGN2-201ENST00000361427 MAP4K5Q9Y4K4 846 aa9.16□□□□□ -0.94
HMGN2-201ENST00000361427 C4AP0C0L4 1744 aa9.16□□□□□ -0.94
HMGN2-201ENST00000361427 KDM3BQ7LBC6 1761 aa9.15□□□□□ -0.94
HMGN2-201ENST00000361427 USP42Q9H9J4 1324 aaKnown RBP9.15□□□□□ -0.94
HMGN2-201ENST00000361427 PRAMEF22A3QJZ6 481 aa9.15□□□□□ -0.94
HMGN2-201ENST00000361427 ANP32CO43423 234 aa9.15□□□□□ -0.94
HMGN2-201ENST00000361427 PRPF40AO75400 957 aaKnown RBP9.15□□□□□ -0.94
HMGN2-201ENST00000361427 STARD3NLO95772 234 aa9.15□□□□□ -0.94
HMGN2-201ENST00000361427 NPR3P17342 541 aa9.15□□□□□ -0.94
HMGN2-201ENST00000361427 FSHRP23945 695 aa9.15□□□□□ -0.94
HMGN2-201ENST00000361427 EIF5P55010 431 aaKnown RBP9.15□□□□□ -0.94
HMGN2-201ENST00000361427 NAA30Q147X3 362 aaPredicted RBP9.15□□□□□ -0.94
HMGN2-201ENST00000361427 METTL16Q86W50 562 aaKnown RBP9.15□□□□□ -0.94
HMGN2-201ENST00000361427 TSEN2Q8NCE0 465 aaKnown RBP9.15□□□□□ -0.94
HMGN2-201ENST00000361427 SCARF2Q96GP6 870 aaPredicted RBP9.15□□□□□ -0.94
HMGN2-201ENST00000361427 LNPKQ9C0E8 428 aa9.15□□□□□ -0.94
HMGN2-201ENST00000361427 PARP2Q9UGN5 583 aa9.15□□□□□ -0.94
HMGN2-201ENST00000361427 USP16Q9Y5T5 823 aa9.15□□□□□ -0.94
HMGN2-201ENST00000361427 SPINT1O43278 529 aa9.14□□□□□ -0.95
HMGN2-201ENST00000361427 SORBS3O60504 671 aa9.14□□□□□ -0.95
HMGN2-201ENST00000361427 GIGYF1O75420 1035 aaPredicted RBP9.14□□□□□ -0.95
HMGN2-201ENST00000361427 LDHBP07195 334 aaKnown RBP9.14□□□□□ -0.95
HMGN2-201ENST00000361427 SNRPA1P09661 255 aaKnown RBP9.14□□□□□ -0.95
HMGN2-201ENST00000361427 ITGA6P23229 1130 aa9.14□□□□□ -0.95
HMGN2-201ENST00000361427 RFC4P35249 363 aa9.14□□□□□ -0.95
HMGN2-201ENST00000361427 EIF4A1P60842 406 aaKnown RBP9.14□□□□□ -0.95
HMGN2-201ENST00000361427 GNL2Q13823 731 aaKnown RBP9.14□□□□□ -0.95
HMGN2-201ENST00000361427 NLGN1Q8N2Q7 840 aa9.14□□□□□ -0.95
HMGN2-201ENST00000361427 CITED4Q96RK1 184 aa9.14□□□□□ -0.95
HMGN2-201ENST00000361427 CAPN10Q9HC96 672 aa9.14□□□□□ -0.95
HMGN2-201ENST00000361427 BABAM1Q9NWV8 329 aa9.14□□□□□ -0.95
HMGN2-201ENST00000361427 SRP68Q9UHB9 627 aaKnown RBP9.14□□□□□ -0.95
HMGN2-201ENST00000361427 RRP7AQ9Y3A4 280 aaKnown RBP9.14□□□□□ -0.95
HMGN2-201ENST00000361427 CHL1O00533 1208 aa9.13□□□□□ -0.95
HMGN2-201ENST00000361427 A1BGP04217 495 aa9.13□□□□□ -0.95
HMGN2-201ENST00000361427 MAPK8P45983 427 aa9.13□□□□□ -0.95
HMGN2-201ENST00000361427 PLCB3Q01970 1234 aa9.13□□□□□ -0.95
HMGN2-201ENST00000361427 LMOD3Q0VAK6 560 aa9.13□□□□□ -0.95
HMGN2-201ENST00000361427 Q6ZVU0 165 aa9.13□□□□□ -0.95
HMGN2-201ENST00000361427 VASH1Q7L8A9 365 aaPredicted RBP9.13□□□□□ -0.95
HMGN2-201ENST00000361427 TMC4Q7Z404 712 aa9.13□□□□□ -0.95
HMGN2-201ENST00000361427 TRMT44Q8IYL2 757 aaKnown RBP9.13□□□□□ -0.95
HMGN2-201ENST00000361427 CCDC116Q8IYX3 515 aa9.13□□□□□ -0.95
HMGN2-201ENST00000361427 FAM161BQ96MY7 647 aa9.13□□□□□ -0.95
HMGN2-201ENST00000361427 VTI1BQ9UEU0 232 aa9.13□□□□□ -0.95
HMGN2-201ENST00000361427 NARFQ9UHQ1 456 aa9.13□□□□□ -0.95
HMGN2-201ENST00000361427 CD2APQ9Y5K6 639 aa9.13□□□□□ -0.95
HMGN2-201ENST00000361427 COL15A1P39059 1388 aa9.12□□□□□ -0.95
HMGN2-201ENST00000361427 APAF1O14727 1248 aa9.12□□□□□ -0.95
HMGN2-201ENST00000361427 ADAM23O75077 832 aa9.12□□□□□ -0.95
HMGN2-201ENST00000361427 MMP10P09238 476 aa9.12□□□□□ -0.95
HMGN2-201ENST00000361427 TM4SF1P30408 202 aa9.12□□□□□ -0.95
HMGN2-201ENST00000361427 GTF2F1P35269 517 aaKnown RBP eCLIP9.12□□□□□ -0.95
HMGN2-201ENST00000361427 IL6STP40189 918 aaPredicted RBP9.12□□□□□ -0.95
HMGN2-201ENST00000361427 FANCCQ00597 558 aa9.12□□□□□ -0.95
HMGN2-201ENST00000361427 PSMD2Q13200 908 aa9.12□□□□□ -0.95
HMGN2-201ENST00000361427 NBPF10Q6P3W6 841 aaKnown RBP9.12□□□□□ -0.95
HMGN2-201ENST00000361427 LYPD4Q6UWN0 246 aa9.12□□□□□ -0.95
HMGN2-201ENST00000361427 SV2AQ7L0J3 742 aa9.12□□□□□ -0.95
HMGN2-201ENST00000361427 SH3BP5LQ7L8J4 393 aa9.12□□□□□ -0.95
HMGN2-201ENST00000361427 NBPF15Q8N660 670 aa9.12□□□□□ -0.95
HMGN2-201ENST00000361427 NLGN2Q8NFZ4 835 aa9.12□□□□□ -0.95
HMGN2-201ENST00000361427 DHX38Q92620 1227 aaKnown RBP9.12□□□□□ -0.95
HMGN2-201ENST00000361427 ARMC5Q96C12 935 aa9.12□□□□□ -0.95
HMGN2-201ENST00000361427 DUSP9Q99956 384 aaKnown RBP9.12□□□□□ -0.95
HMGN2-201ENST00000361427 ZNF853P0CG23 659 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms