RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 ATL3Q6DD88 541 aa15.79■□□□□ 0.12
CTR9-201ENST00000361367 ECM2O94769 699 aaPredicted RBP15.79■□□□□ 0.12
CTR9-201ENST00000361367 OTUD7BQ6GQQ9 843 aa15.79■□□□□ 0.12
CTR9-201ENST00000361367 SSH2Q76I76 1423 aa15.79■□□□□ 0.12
CTR9-201ENST00000361367 ZNF174Q15697 407 aa15.78■□□□□ 0.12
CTR9-201ENST00000361367 KRI1Q8N9T8 703 aaKnown RBP15.78■□□□□ 0.12
CTR9-201ENST00000361367 TDRD12Q587J7 1177 aaKnown RBP15.78■□□□□ 0.12
CTR9-201ENST00000361367 LRSAM1Q6UWE0 723 aa15.78■□□□□ 0.12
CTR9-201ENST00000361367 N4BP3O15049 544 aa15.78■□□□□ 0.12
CTR9-201ENST00000361367 SPATA31A6Q5VVP1 1343 aa15.78■□□□□ 0.12
CTR9-201ENST00000361367 BICD1Q96G01 975 aa15.78■□□□□ 0.12
CTR9-201ENST00000361367 LRRC7Q96NW7 1537 aa15.78■□□□□ 0.12
CTR9-201ENST00000361367 RIMS1Q86UR5 1692 aaKnown RBP15.77■□□□□ 0.12
CTR9-201ENST00000361367 PSMA7O14818 248 aa15.77■□□□□ 0.12
CTR9-201ENST00000361367 DTNBO60941 627 aa15.77■□□□□ 0.12
CTR9-201ENST00000361367 SASH1O94885 1247 aa15.77■□□□□ 0.12
CTR9-201ENST00000361367 POLA2Q14181 598 aa15.77■□□□□ 0.12
CTR9-201ENST00000361367 PREX1Q8TCU6 1659 aa15.77■□□□□ 0.12
CTR9-201ENST00000361367 YEATS4O95619 227 aa15.77■□□□□ 0.12
CTR9-201ENST00000361367 DESP17661 470 aa15.77■□□□□ 0.12
CTR9-201ENST00000361367 HSP90AA2PQ14568 343 aaPredicted RBP15.77■□□□□ 0.12
CTR9-201ENST00000361367 CCDC150Q8NCX0 1101 aa15.77■□□□□ 0.12
CTR9-201ENST00000361367 DIP2AQ14689 1571 aa15.77■□□□□ 0.12
CTR9-201ENST00000361367 VWA3AA6NCI4 1184 aa15.77■□□□□ 0.11
CTR9-201ENST00000361367 GRAPQ13588 217 aa15.77■□□□□ 0.11
CTR9-201ENST00000361367 VPS72Q15906 364 aa15.77■□□□□ 0.11
CTR9-201ENST00000361367 EPHA10Q5JZY3 1008 aa15.77■□□□□ 0.11
CTR9-201ENST00000361367 PI16Q6UXB8 463 aa15.77■□□□□ 0.11
CTR9-201ENST00000361367 PIK3AP1Q6ZUJ8 805 aa15.77■□□□□ 0.11
CTR9-201ENST00000361367 TMC6Q7Z403 805 aa15.77■□□□□ 0.11
CTR9-201ENST00000361367 ZSCAN30Q86W11 494 aa15.77■□□□□ 0.11
CTR9-201ENST00000361367 ZNF654Q8IZM8 581 aa15.77■□□□□ 0.11
CTR9-201ENST00000361367 GRAPLQ8TC17 118 aaPredicted RBP15.77■□□□□ 0.11
CTR9-201ENST00000361367 ANTXR1Q9H6X2 564 aa15.77■□□□□ 0.11
CTR9-201ENST00000361367 PALD1Q9ULE6 856 aa15.77■□□□□ 0.11
CTR9-201ENST00000361367 ATF5Q9Y2D1 282 aaPredicted RBP15.77■□□□□ 0.11
CTR9-201ENST00000361367 TECPR2O15040 1411 aa15.77■□□□□ 0.11
CTR9-201ENST00000361367 COL15A1P39059 1388 aa15.77■□□□□ 0.11
CTR9-201ENST00000361367 ANO6Q4KMQ2 910 aa15.77■□□□□ 0.11
CTR9-201ENST00000361367 ZMYM1Q5SVZ6 1142 aa15.77■□□□□ 0.11
CTR9-201ENST00000361367 FAM173BQ6P4H8 233 aa15.77■□□□□ 0.11
CTR9-201ENST00000361367 IQUBQ8NA54 791 aa15.77■□□□□ 0.11
CTR9-201ENST00000361367 NAP1L4Q99733 375 aaKnown RBP15.77■□□□□ 0.11
CTR9-201ENST00000361367 LZTS2Q9BRK4 669 aa15.77■□□□□ 0.11
CTR9-201ENST00000361367 GLT8D2Q9H1C3 349 aa15.77■□□□□ 0.11
CTR9-201ENST00000361367 ATP10DQ9P241 1426 aa15.76■□□□□ 0.11
CTR9-201ENST00000361367 SPATA31D1Q6ZQQ2 1576 aa15.76■□□□□ 0.11
CTR9-201ENST00000361367 ADCY5O95622 1261 aa15.76■□□□□ 0.11
CTR9-201ENST00000361367 CDR1P51861 262 aa15.76■□□□□ 0.11
CTR9-201ENST00000361367 DPY19L2Q6NUT2 758 aa15.76■□□□□ 0.11
CTR9-201ENST00000361367 CPS1P31327 1500 aa15.76■□□□□ 0.11
CTR9-201ENST00000361367 ADRA2BP18089 450 aa15.76■□□□□ 0.11
CTR9-201ENST00000361367 CPXCR1Q8N123 301 aa15.76■□□□□ 0.11
CTR9-201ENST00000361367 DNAI2Q9GZS0 605 aa15.76■□□□□ 0.11
CTR9-201ENST00000361367 ZSCAN12O43309 604 aa15.76■□□□□ 0.11
CTR9-201ENST00000361367 JAK2O60674 1132 aa15.76■□□□□ 0.11
CTR9-201ENST00000361367 SSR1P43307 286 aaKnown RBP15.76■□□□□ 0.11
CTR9-201ENST00000361367 ERCC4Q92889 916 aaPredicted RBP15.76■□□□□ 0.11
CTR9-201ENST00000361367 DBNDD1Q9H9R9 158 aa15.76■□□□□ 0.11
CTR9-201ENST00000361367 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.76■□□□□ 0.11
CTR9-201ENST00000361367 SP4Q02446 784 aa15.75■□□□□ 0.11
CTR9-201ENST00000361367 JAKMIP3Q5VZ66 844 aa15.75■□□□□ 0.11
CTR9-201ENST00000361367 FAM200AQ8TCP9 573 aa15.75■□□□□ 0.11
CTR9-201ENST00000361367 TAF4BQ92750 862 aa15.75■□□□□ 0.11
CTR9-201ENST00000361367 BSDC1Q9NW68 430 aaPredicted RBP15.75■□□□□ 0.11
CTR9-201ENST00000361367 FRMPD1Q5SYB0 1578 aa15.75■□□□□ 0.11
CTR9-201ENST00000361367 hCG_1642624A0A1W2PR95 340 aa15.75■□□□□ 0.11
CTR9-201ENST00000361367 TCP10L2B9ZVM9 353 aa15.75■□□□□ 0.11
CTR9-201ENST00000361367 KRT40Q6A162 431 aa15.75■□□□□ 0.11
CTR9-201ENST00000361367 NPR1P16066 1061 aa15.75■□□□□ 0.11
CTR9-201ENST00000361367 UVSSAQ2YD98 709 aa15.75■□□□□ 0.11
CTR9-201ENST00000361367 HSP90AA4PQ58FG1 418 aa15.75■□□□□ 0.11
CTR9-201ENST00000361367 PLIN2Q99541 437 aa15.75■□□□□ 0.11
CTR9-201ENST00000361367 ATP8A2Q9NTI2 1148 aa15.75■□□□□ 0.11
CTR9-201ENST00000361367 ANO1Q5XXA6 986 aa15.75■□□□□ 0.11
CTR9-201ENST00000361367 CCDC174Q6PII3 467 aa15.75■□□□□ 0.11
CTR9-201ENST00000361367 ARHGEF1Q92888 912 aaKnown RBP15.75■□□□□ 0.11
CTR9-201ENST00000361367 DNAJC25Q9H1X3 360 aa15.75■□□□□ 0.11
CTR9-201ENST00000361367 SOS2Q07890 1332 aaPredicted RBP15.74■□□□□ 0.11
CTR9-201ENST00000361367 USP8P40818 1118 aa15.74■□□□□ 0.11
CTR9-201ENST00000361367 GSDMDP57764 484 aa15.74■□□□□ 0.11
CTR9-201ENST00000361367 SPAG1Q07617 926 aa15.74■□□□□ 0.11
CTR9-201ENST00000361367 ME3Q16798 604 aa15.74■□□□□ 0.11
CTR9-201ENST00000361367 EAPPQ56P03 285 aaPredicted RBP15.74■□□□□ 0.11
CTR9-201ENST00000361367 SYNE4Q8N205 404 aa15.74■□□□□ 0.11
CTR9-201ENST00000361367 MAP4K1Q92918 833 aa15.74■□□□□ 0.11
CTR9-201ENST00000361367 TNKSO95271 1327 aa15.74■□□□□ 0.11
CTR9-201ENST00000361367 NBPF26B4DH59 902 aa15.74■□□□□ 0.11
CTR9-201ENST00000361367 BACH1O14867 736 aa15.74■□□□□ 0.11
CTR9-201ENST00000361367 TXNRD1Q16881 649 aa15.74■□□□□ 0.11
CTR9-201ENST00000361367 NBPF10Q6P3W6 841 aaKnown RBP15.74■□□□□ 0.11
CTR9-201ENST00000361367 NBPF15Q8N660 670 aa15.74■□□□□ 0.11
CTR9-201ENST00000361367 ZSCAN10Q96SZ4 725 aaPredicted RBP15.74■□□□□ 0.11
CTR9-201ENST00000361367 ZBTB21Q9ULJ3 1066 aa15.74■□□□□ 0.11
CTR9-201ENST00000361367 NRXN1Q9ULB1 1477 aa15.74■□□□□ 0.11
CTR9-201ENST00000361367 A0A1B0GVL5 298 aa15.74■□□□□ 0.11
CTR9-201ENST00000361367 MYO3AQ8NEV4 1616 aa15.74■□□□□ 0.11
CTR9-201ENST00000361367 ARID4AP29374 1257 aaPredicted RBP15.73■□□□□ 0.11
CTR9-201ENST00000361367 SLC27A3Q5K4L6 730 aa15.73■□□□□ 0.11
CTR9-201ENST00000361367 PKD2L1Q9P0L9 805 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms