RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.31■■□□□ 1
PDLIM7-203ENST00000359895 WTAPQ15007 396 aa21.31■■□□□ 1
PDLIM7-203ENST00000359895 MICU3Q86XE3 530 aa21.31■■□□□ 1
PDLIM7-203ENST00000359895 NSUN4Q96CB9 384 aaKnown RBP21.31■■□□□ 1
PDLIM7-203ENST00000359895 RRAGDQ9NQL2 400 aaPredicted RBP21.31■■□□□ 1
PDLIM7-203ENST00000359895 INCENPQ9NQS7 918 aa21.31■■□□□ 1
PDLIM7-203ENST00000359895 TOMM22Q9NS69 142 aa21.31■■□□□ 1
PDLIM7-203ENST00000359895 IRS2Q9Y4H2 1338 aa21.31■■□□□ 1
PDLIM7-203ENST00000359895 DUOX1Q9NRD9 1551 aa21.31■■□□□ 1
PDLIM7-203ENST00000359895 TRIM37O94972 964 aa21.31■■□□□ 1
PDLIM7-203ENST00000359895 KLRK1P26718 216 aa21.31■■□□□ 1
PDLIM7-203ENST00000359895 RRP12Q5JTH9 1297 aaKnown RBP21.31■■□□□ 1
PDLIM7-203ENST00000359895 RBM43Q6ZSC3 357 aaKnown RBP21.31■■□□□ 1
PDLIM7-203ENST00000359895 SDR42E1Q8WUS8 393 aa21.31■■□□□ 1
PDLIM7-203ENST00000359895 ESR2Q92731 530 aa21.31■■□□□ 1
PDLIM7-203ENST00000359895 ALG1Q9BT22 464 aa21.31■■□□□ 1
PDLIM7-203ENST00000359895 TFCP2L1Q9NZI6 479 aa21.31■■□□□ 1
PDLIM7-203ENST00000359895 MYH6P13533 1939 aa21.3■■□□□ 1
PDLIM7-203ENST00000359895 PPFIA3O75145 1194 aa21.3■■□□□ 1
PDLIM7-203ENST00000359895 CDC27P30260 824 aa21.3■■□□□ 1
PDLIM7-203ENST00000359895 IARSP41252 1262 aaKnown RBP21.3■■□□□ 1
PDLIM7-203ENST00000359895 WASF1Q92558 559 aa21.3■■□□□ 1
PDLIM7-203ENST00000359895 SENP2Q9HC62 589 aa21.3■■□□□ 1
PDLIM7-203ENST00000359895 MINDY4BA8MYZ0 360 aa21.29■■□□□ 1
PDLIM7-203ENST00000359895 YEATS4O95619 227 aa21.29■■□□□ 1
PDLIM7-203ENST00000359895 ST5P78524 1137 aa21.29■■□□□ 1
PDLIM7-203ENST00000359895 MECOMQ03112 1051 aa21.29■■□□□ 1
PDLIM7-203ENST00000359895 CEBPZQ03701 1054 aaKnown RBP21.29■■□□□ 1
PDLIM7-203ENST00000359895 NTRK3Q16288 839 aa21.29■■□□□ 1
PDLIM7-203ENST00000359895 PRR5LQ6MZQ0 368 aa21.29■■□□□ 1
PDLIM7-203ENST00000359895 C15orf52Q6ZUT6 534 aaKnown RBP21.29■■□□□ 1
PDLIM7-203ENST00000359895 RPGRQ92834 1020 aaKnown RBP21.29■■□□□ 1
PDLIM7-203ENST00000359895 CRNKL1Q9BZJ0 848 aaKnown RBP21.29■■□□□ 1
PDLIM7-203ENST00000359895 XDHP47989 1333 aa21.29■■□□□ 1
PDLIM7-203ENST00000359895 CCDC196A0A1B0GTZ2 297 aa21.28■■□□□ 1
PDLIM7-203ENST00000359895 CTAGE5O15320 804 aa21.28■■□□□ 1
PDLIM7-203ENST00000359895 DYNLL1P63167 89 aaKnown RBP21.28■■□□□ 1
PDLIM7-203ENST00000359895 KIF23Q02241 960 aaPredicted RBP21.28■■□□□ 1
PDLIM7-203ENST00000359895 SSRP1Q08945 709 aaKnown RBP21.28■■□□□ 1
PDLIM7-203ENST00000359895 CCDC73Q6ZRK6 1079 aa21.28■■□□□ 1
PDLIM7-203ENST00000359895 ZNF384Q8TF68 577 aa21.28■■□□□ 1
PDLIM7-203ENST00000359895 UBAC1Q9BSL1 405 aa21.28■■□□□ 1
PDLIM7-203ENST00000359895 POLR3EQ9NVU0 708 aa21.28■■□□□ 1
PDLIM7-203ENST00000359895 ANKIB1Q9P2G1 1089 aa21.28■■□□□ 1
PDLIM7-203ENST00000359895 NR1I2O75469 434 aa21.27■■□□□ 1
PDLIM7-203ENST00000359895 GYS1P13807 737 aa21.27■■□□□ 1
PDLIM7-203ENST00000359895 IFNAR1P17181 557 aa21.27■■□□□ 1
PDLIM7-203ENST00000359895 CLCN1P35523 988 aa21.27■■□□□ 1
PDLIM7-203ENST00000359895 CHAF1AQ13111 956 aaPredicted RBP21.27■■□□□ 1
PDLIM7-203ENST00000359895 TRIM29Q14134 588 aa21.27■■□□□ 1
PDLIM7-203ENST00000359895 PPP2R5BQ15173 497 aa21.27■■□□□ 1
PDLIM7-203ENST00000359895 MYSM1Q5VVJ2 828 aa21.27■■□□□ 1
PDLIM7-203ENST00000359895 OTUD7BQ6GQQ9 843 aa21.27■■□□□ 1
PDLIM7-203ENST00000359895 CCDC125Q86Z20 511 aa21.27■■□□□ 1
PDLIM7-203ENST00000359895 CCAR1Q8IX12 1150 aaKnown RBP21.27■■□□□ 1
PDLIM7-203ENST00000359895 WDR66Q8TBY9 1149 aa21.27■■□□□ 1
PDLIM7-203ENST00000359895 KCNG4Q8TDN1 519 aa21.27■■□□□ 1
PDLIM7-203ENST00000359895 FAM217BQ9NTX9 383 aaPredicted RBP21.27■■□□□ 1
PDLIM7-203ENST00000359895 FMNL1O95466 1100 aaPredicted RBP21.27■□□□□ 0.99
PDLIM7-203ENST00000359895 FGRP09769 529 aa21.27■□□□□ 0.99
PDLIM7-203ENST00000359895 RXRAP19793 462 aa21.27■□□□□ 0.99
PDLIM7-203ENST00000359895 RTN1Q16799 776 aa21.27■□□□□ 0.99
PDLIM7-203ENST00000359895 ZSCAN30Q86W11 494 aa21.27■□□□□ 0.99
PDLIM7-203ENST00000359895 ATP8A2Q9NTI2 1148 aa21.27■□□□□ 0.99
PDLIM7-203ENST00000359895 CCDC39Q9UFE4 941 aa21.27■□□□□ 0.99
PDLIM7-203ENST00000359895 SERPINB2P05120 415 aa21.26■□□□□ 0.99
PDLIM7-203ENST00000359895 ME1P48163 572 aa21.26■□□□□ 0.99
PDLIM7-203ENST00000359895 TYRO3Q06418 890 aa21.26■□□□□ 0.99
PDLIM7-203ENST00000359895 CAMK4Q16566 473 aa21.26■□□□□ 0.99
PDLIM7-203ENST00000359895 CRY2Q49AN0 593 aa21.26■□□□□ 0.99
PDLIM7-203ENST00000359895 KRT40Q6A162 431 aa21.26■□□□□ 0.99
PDLIM7-203ENST00000359895 ZNF804AQ7Z570 1209 aa21.26■□□□□ 0.99
PDLIM7-203ENST00000359895 TRIM22Q8IYM9 498 aa21.26■□□□□ 0.99
PDLIM7-203ENST00000359895 A0A1W2PQ27 194 aa21.25■□□□□ 0.99
PDLIM7-203ENST00000359895 A0A1W2PQ64 194 aa21.25■□□□□ 0.99
PDLIM7-203ENST00000359895 A0A1W2PQD8 194 aa21.25■□□□□ 0.99
PDLIM7-203ENST00000359895 STK38Q15208 465 aa21.25■□□□□ 0.99
PDLIM7-203ENST00000359895 ADALQ6DHV7 355 aa21.25■□□□□ 0.99
PDLIM7-203ENST00000359895 CCDC144CPQ8IYA2 1237 aa21.25■□□□□ 0.99
PDLIM7-203ENST00000359895 LINC00301Q8NCQ3 95 aa21.25■□□□□ 0.99
PDLIM7-203ENST00000359895 RBM17Q96I25 401 aaKnown RBP21.25■□□□□ 0.99
PDLIM7-203ENST00000359895 FTOQ9C0B1 505 aaKnown RBP eCLIP21.25■□□□□ 0.99
PDLIM7-203ENST00000359895 RANBP6O60518 1105 aaKnown RBP21.24■□□□□ 0.99
PDLIM7-203ENST00000359895 POLR3DP05423 398 aaPredicted RBP21.24■□□□□ 0.99
PDLIM7-203ENST00000359895 SLC3A2P08195 630 aaKnown RBP21.24■□□□□ 0.99
PDLIM7-203ENST00000359895 NT5C2P49902 561 aa21.24■□□□□ 0.99
PDLIM7-203ENST00000359895 FAM160A1Q05DH4 1040 aa21.24■□□□□ 0.99
PDLIM7-203ENST00000359895 SEC23AQ15436 765 aa21.24■□□□□ 0.99
PDLIM7-203ENST00000359895 CTR9Q6PD62 1173 aa21.24■□□□□ 0.99
PDLIM7-203ENST00000359895 SASS6Q6UVJ0 657 aa21.24■□□□□ 0.99
PDLIM7-203ENST00000359895 TXNRD3Q86VQ6 643 aa21.24■□□□□ 0.99
PDLIM7-203ENST00000359895 DZIP1Q86YF9 867 aaKnown RBP21.24■□□□□ 0.99
PDLIM7-203ENST00000359895 ZNF654Q8IZM8 581 aa21.24■□□□□ 0.99
PDLIM7-203ENST00000359895 TDRD7Q8NHU6 1098 aaKnown RBP21.24■□□□□ 0.99
PDLIM7-203ENST00000359895 PHKBQ93100 1093 aa21.24■□□□□ 0.99
PDLIM7-203ENST00000359895 ZKSCAN3Q9BRR0 538 aa21.24■□□□□ 0.99
PDLIM7-203ENST00000359895 MYL10Q9BUA6 226 aa21.24■□□□□ 0.99
PDLIM7-203ENST00000359895 CAVIN2O95810 425 aa21.23■□□□□ 0.99
PDLIM7-203ENST00000359895 ATP2B4P23634 1241 aa21.23■□□□□ 0.99
PDLIM7-203ENST00000359895 PRDX5P30044 214 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms