RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 AATFQ9NY61 560 aaKnown RBP eCLIP20.73■□□□□ 0.91
FAM3D-201ENST00000358781 ZBTB48P10074 688 aaPredicted RBP20.72■□□□□ 0.91
FAM3D-201ENST00000358781 PLCG2P16885 1265 aa20.72■□□□□ 0.91
FAM3D-201ENST00000358781 LBX1P52954 281 aa20.72■□□□□ 0.91
FAM3D-201ENST00000358781 SH3BP5LQ7L8J4 393 aa20.72■□□□□ 0.91
FAM3D-201ENST00000358781 TEX11Q8IYF3 940 aa20.72■□□□□ 0.91
FAM3D-201ENST00000358781 MAGEB6Q8N7X4 407 aa20.72■□□□□ 0.91
FAM3D-201ENST00000358781 WRNIP1Q96S55 665 aa20.72■□□□□ 0.91
FAM3D-201ENST00000358781 ELP3Q9H9T3 547 aa20.72■□□□□ 0.91
FAM3D-201ENST00000358781 PRDM10Q9NQV6 1147 aa20.72■□□□□ 0.91
FAM3D-201ENST00000358781 CSADQ9Y600 493 aa20.72■□□□□ 0.91
FAM3D-201ENST00000358781 ATRNL1Q5VV63 1379 aa20.71■□□□□ 0.91
FAM3D-201ENST00000358781 LAMB1P07942 1786 aa20.71■□□□□ 0.91
FAM3D-201ENST00000358781 GOLIM4O00461 696 aa20.71■□□□□ 0.91
FAM3D-201ENST00000358781 HDAC1Q13547 482 aaPredicted RBP20.71■□□□□ 0.91
FAM3D-201ENST00000358781 ZSCAN29Q8IWY8 852 aaPredicted RBP20.71■□□□□ 0.91
FAM3D-201ENST00000358781 BOLA2Q9H3K6 86 aa20.71■□□□□ 0.91
FAM3D-201ENST00000358781 TSKSQ9UJT2 592 aa20.71■□□□□ 0.91
FAM3D-201ENST00000358781 CDK5RAP2Q96SN8 1893 aa20.7■□□□□ 0.9
FAM3D-201ENST00000358781 DDTLA6NHG4 134 aaPredicted RBP20.7■□□□□ 0.9
FAM3D-201ENST00000358781 GJA5P36382 358 aa20.7■□□□□ 0.9
FAM3D-201ENST00000358781 TM4SF4P48230 202 aa20.7■□□□□ 0.9
FAM3D-201ENST00000358781 SREBF2Q12772 1141 aa20.7■□□□□ 0.9
FAM3D-201ENST00000358781 COL13A1Q5TAT6 717 aaPredicted RBP20.7■□□□□ 0.9
FAM3D-201ENST00000358781 EXOC6Q8TAG9 804 aa20.7■□□□□ 0.9
FAM3D-201ENST00000358781 HAUS7Q99871 368 aa20.7■□□□□ 0.9
FAM3D-201ENST00000358781 PAG1Q9NWQ8 432 aa20.7■□□□□ 0.9
FAM3D-201ENST00000358781 RNF186Q9NXI6 227 aa20.7■□□□□ 0.9
FAM3D-201ENST00000358781 SAGE1Q9NXZ1 904 aa20.7■□□□□ 0.9
FAM3D-201ENST00000358781 ZNF112Q9UJU3 913 aa20.7■□□□□ 0.9
FAM3D-201ENST00000358781 COL2A1P02458 1487 aaPredicted RBP20.69■□□□□ 0.9
FAM3D-201ENST00000358781 ZKSCAN4Q969J2 545 aaPredicted RBP20.69■□□□□ 0.9
FAM3D-201ENST00000358781 OPTNQ96CV9 577 aa20.69■□□□□ 0.9
FAM3D-201ENST00000358781 EDC3Q96F86 508 aaKnown RBP20.69■□□□□ 0.9
FAM3D-201ENST00000358781 OSBPL5Q9H0X9 879 aaPredicted RBP20.69■□□□□ 0.9
FAM3D-201ENST00000358781 ECHDC1Q9NTX5 307 aa20.69■□□□□ 0.9
FAM3D-201ENST00000358781 SNCAIPQ9Y6H5 919 aa20.69■□□□□ 0.9
FAM3D-201ENST00000358781 FOCADQ5VW36 1801 aa20.69■□□□□ 0.9
FAM3D-201ENST00000358781 MANSC4A6NHS7 340 aaPredicted RBP20.68■□□□□ 0.9
FAM3D-201ENST00000358781 TRPA1O75762 1119 aa20.68■□□□□ 0.9
FAM3D-201ENST00000358781 DYNLL1P63167 89 aaKnown RBP20.68■□□□□ 0.9
FAM3D-201ENST00000358781 MAP3K10Q02779 954 aa20.68■□□□□ 0.9
FAM3D-201ENST00000358781 MIGA1Q8NAN2 632 aa20.68■□□□□ 0.9
FAM3D-201ENST00000358781 CNKSR2Q8WXI2 1034 aa20.68■□□□□ 0.9
FAM3D-201ENST00000358781 GPATCH3Q96I76 525 aa20.68■□□□□ 0.9
FAM3D-201ENST00000358781 PDE6AP16499 860 aa20.67■□□□□ 0.9
FAM3D-201ENST00000358781 INPP5BP32019 993 aa20.67■□□□□ 0.9
FAM3D-201ENST00000358781 SLC9C2Q5TAH2 1124 aa20.67■□□□□ 0.9
FAM3D-201ENST00000358781 CERS3Q8IU89 383 aa20.67■□□□□ 0.9
FAM3D-201ENST00000358781 SPDYE5A6NIY4 337 aa20.66■□□□□ 0.9
FAM3D-201ENST00000358781 INHBEP58166 350 aa20.66■□□□□ 0.9
FAM3D-201ENST00000358781 ERO1BQ86YB8 467 aa20.66■□□□□ 0.9
FAM3D-201ENST00000358781 TGFBRAP1Q8WUH2 860 aa20.66■□□□□ 0.9
FAM3D-201ENST00000358781 GCC1Q96CN9 775 aa20.66■□□□□ 0.9
FAM3D-201ENST00000358781 PHF20L1A8MW92 1017 aa20.65■□□□□ 0.9
FAM3D-201ENST00000358781 MAPKAPK5Q8IW41 473 aa20.65■□□□□ 0.9
FAM3D-201ENST00000358781 OTUD5Q96G74 571 aa20.65■□□□□ 0.9
FAM3D-201ENST00000358781 FLT1P17948 1338 aa20.65■□□□□ 0.9
FAM3D-201ENST00000358781 MYH7P12883 1935 aa20.64■□□□□ 0.9
FAM3D-201ENST00000358781 TCRBV5S4A2TA0A5A2 114 aa20.64■□□□□ 0.89
FAM3D-201ENST00000358781 TBC1D12O60347 775 aa20.64■□□□□ 0.89
FAM3D-201ENST00000358781 NOL9Q5SY16 702 aaKnown RBP20.64■□□□□ 0.89
FAM3D-201ENST00000358781 TSHZ3Q63HK5 1081 aa20.64■□□□□ 0.89
FAM3D-201ENST00000358781 ZNF532Q9HCE3 1301 aa20.64■□□□□ 0.89
FAM3D-201ENST00000358781 CASP8AP2Q9UKL3 1982 aa20.64■□□□□ 0.89
FAM3D-201ENST00000358781 TESPA1A2RU30 521 aaPredicted RBP20.63■□□□□ 0.89
FAM3D-201ENST00000358781 SLURP2P0DP57 97 aa20.63■□□□□ 0.89
FAM3D-201ENST00000358781 ANKRD45Q5TZF3 282 aa20.63■□□□□ 0.89
FAM3D-201ENST00000358781 IFNL1Q8IU54 200 aa20.63■□□□□ 0.89
FAM3D-201ENST00000358781 MS4A4AQ96JQ5 239 aa20.63■□□□□ 0.89
FAM3D-201ENST00000358781 RIOK1Q9BRS2 568 aaKnown RBP20.63■□□□□ 0.89
FAM3D-201ENST00000358781 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.63■□□□□ 0.89
FAM3D-201ENST00000358781 DHX36Q9H2U1 1008 aaKnown RBP20.63■□□□□ 0.89
FAM3D-201ENST00000358781 RWDD1Q9H446 243 aaPredicted RBP20.63■□□□□ 0.89
FAM3D-201ENST00000358781 ZBTB47Q9UFB7 747 aaPredicted RBP20.63■□□□□ 0.89
FAM3D-201ENST00000358781 MAGEB6P1A0A0J9YX57 407 aa20.62■□□□□ 0.89
FAM3D-201ENST00000358781 ADD2P35612 726 aa20.62■□□□□ 0.89
FAM3D-201ENST00000358781 GTF2A2P52657 109 aa20.62■□□□□ 0.89
FAM3D-201ENST00000358781 PPIL2Q13356 520 aa20.62■□□□□ 0.89
FAM3D-201ENST00000358781 OTUD7AQ8TE49 926 aaPredicted RBP20.62■□□□□ 0.89
FAM3D-201ENST00000358781 TTC41PQ6P2S7 1318 aa20.62■□□□□ 0.89
FAM3D-201ENST00000358781 IGF2BP3O00425 579 aaKnown RBP eCLIP20.61■□□□□ 0.89
FAM3D-201ENST00000358781 SIPA1L1O43166 1804 aa20.61■□□□□ 0.89
FAM3D-201ENST00000358781 ALDH1A1P00352 501 aa20.61■□□□□ 0.89
FAM3D-201ENST00000358781 MYH1P12882 1939 aa20.61■□□□□ 0.89
FAM3D-201ENST00000358781 PPATQ06203 517 aa20.61■□□□□ 0.89
FAM3D-201ENST00000358781 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.61■□□□□ 0.89
FAM3D-201ENST00000358781 PI4KBQ9UBF8 816 aa20.61■□□□□ 0.89
FAM3D-201ENST00000358781 FAM196BA6NMK8 535 aa20.6■□□□□ 0.89
FAM3D-201ENST00000358781 IRF6O14896 467 aa20.6■□□□□ 0.89
FAM3D-201ENST00000358781 CTNND1O60716 968 aaKnown RBP20.6■□□□□ 0.89
FAM3D-201ENST00000358781 USP5P45974 858 aa20.6■□□□□ 0.89
FAM3D-201ENST00000358781 SCYL3Q8IZE3 742 aa20.6■□□□□ 0.89
FAM3D-201ENST00000358781 BRI3BPQ8WY22 251 aa20.6■□□□□ 0.89
FAM3D-201ENST00000358781 PTPN18Q99952 460 aa20.6■□□□□ 0.89
FAM3D-201ENST00000358781 CFHR5Q9BXR6 569 aa20.6■□□□□ 0.89
FAM3D-201ENST00000358781 SAP30BPQ9UHR5 308 aaKnown RBP20.6■□□□□ 0.89
FAM3D-201ENST00000358781 HERC5Q9UII4 1024 aaKnown RBP20.6■□□□□ 0.89
FAM3D-201ENST00000358781 PALD1Q9ULE6 856 aa20.6■□□□□ 0.89
FAM3D-201ENST00000358781 DOCK1Q14185 1865 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms