RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 SKIDA1Q1XH10 827 aa11.06□□□□□ -0.64
GABPA-201ENST00000354828 APBB1IPQ7Z5R6 666 aaPredicted RBP11.06□□□□□ -0.64
GABPA-201ENST00000354828 SMC5Q8IY18 1101 aa11.06□□□□□ -0.64
GABPA-201ENST00000354828 SLC10A4Q96EP9 437 aa11.06□□□□□ -0.64
GABPA-201ENST00000354828 IMPG2Q9BZV3 1241 aa11.06□□□□□ -0.64
GABPA-201ENST00000354828 DDX39AO00148 427 aaKnown RBP11.06□□□□□ -0.64
GABPA-201ENST00000354828 SYKP43405 635 aa11.06□□□□□ -0.64
GABPA-201ENST00000354828 JAKMIP3Q5VZ66 844 aa11.06□□□□□ -0.64
GABPA-201ENST00000354828 ANKRD35Q8N283 1001 aa11.06□□□□□ -0.64
GABPA-201ENST00000354828 SDR42E1Q8WUS8 393 aa11.06□□□□□ -0.64
GABPA-201ENST00000354828 MADDQ8WXG6 1647 aa11.05□□□□□ -0.64
GABPA-201ENST00000354828 PATL2C9JE40 543 aaKnown RBP11.05□□□□□ -0.64
GABPA-201ENST00000354828 ATP5JP18859 108 aa11.05□□□□□ -0.64
GABPA-201ENST00000354828 IREB2P48200 963 aaKnown RBP11.05□□□□□ -0.64
GABPA-201ENST00000354828 C2orf69Q8N8R5 385 aa11.05□□□□□ -0.64
GABPA-201ENST00000354828 EDC3Q96F86 508 aaKnown RBP11.05□□□□□ -0.64
GABPA-201ENST00000354828 TRIM47Q96LD4 638 aa11.05□□□□□ -0.64
GABPA-201ENST00000354828 MYCP01106 439 aaPredicted RBP11.05□□□□□ -0.64
GABPA-201ENST00000354828 PPARAQ07869 468 aa11.05□□□□□ -0.64
GABPA-201ENST00000354828 ABCB5Q2M3G0 1257 aa11.05□□□□□ -0.64
GABPA-201ENST00000354828 AKNAD1Q5T1N1 836 aa11.05□□□□□ -0.64
GABPA-201ENST00000354828 RRAGBQ5VZM2 374 aa11.05□□□□□ -0.64
GABPA-201ENST00000354828 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.05□□□□□ -0.64
GABPA-201ENST00000354828 RMND1Q9NWS8 449 aa11.05□□□□□ -0.64
GABPA-201ENST00000354828 M0QZ92 97 aa11.05□□□□□ -0.64
GABPA-201ENST00000354828 SEMA3EO15041 775 aa11.05□□□□□ -0.64
GABPA-201ENST00000354828 ERLIN2O94905 339 aa11.05□□□□□ -0.64
GABPA-201ENST00000354828 PDE6AP16499 860 aa11.05□□□□□ -0.64
GABPA-201ENST00000354828 CCNA1P78396 465 aa11.05□□□□□ -0.64
GABPA-201ENST00000354828 DTHD1Q6ZMT9 781 aa11.05□□□□□ -0.64
GABPA-201ENST00000354828 FAM114A1Q8IWE2 563 aa11.05□□□□□ -0.64
GABPA-201ENST00000354828 PLEKHF1Q96S99 279 aa11.05□□□□□ -0.64
GABPA-201ENST00000354828 ANGEL1Q9UNK9 670 aaKnown RBP11.05□□□□□ -0.64
GABPA-201ENST00000354828 NEXMIFQ5QGS0 1516 aa11.05□□□□□ -0.64
GABPA-201ENST00000354828 DPP9Q86TI2 863 aa11.05□□□□□ -0.64
GABPA-201ENST00000354828 GPR101Q96P66 508 aaPredicted RBP11.05□□□□□ -0.64
GABPA-201ENST00000354828 COL15A1P39059 1388 aa11.05□□□□□ -0.64
GABPA-201ENST00000354828 HARSP12081 509 aaKnown RBP11.04□□□□□ -0.64
GABPA-201ENST00000354828 HLFQ16534 295 aa11.04□□□□□ -0.64
GABPA-201ENST00000354828 RUFY3Q7L099 469 aa11.04□□□□□ -0.64
GABPA-201ENST00000354828 SYNCQ9H7C4 482 aa11.04□□□□□ -0.64
GABPA-201ENST00000354828 TRPM1Q7Z4N2 1603 aa11.04□□□□□ -0.64
GABPA-201ENST00000354828 SYCE3A1L190 88 aa11.04□□□□□ -0.64
GABPA-201ENST00000354828 IL27Q8NEV9 243 aa11.04□□□□□ -0.64
GABPA-201ENST00000354828 KCNG4Q8TDN1 519 aa11.04□□□□□ -0.64
GABPA-201ENST00000354828 SPATA31A1Q5TZJ5 1347 aa11.04□□□□□ -0.64
GABPA-201ENST00000354828 CDK12Q9NYV4 1490 aaPredicted RBP11.04□□□□□ -0.64
GABPA-201ENST00000354828 USP17L8P0C7I0 530 aa11.04□□□□□ -0.64
GABPA-201ENST00000354828 OSBPP22059 807 aa11.04□□□□□ -0.64
GABPA-201ENST00000354828 MCM4P33991 863 aa11.04□□□□□ -0.64
GABPA-201ENST00000354828 AK2P54819 239 aa11.04□□□□□ -0.64
GABPA-201ENST00000354828 DPH6Q7L8W6 267 aa11.04□□□□□ -0.64
GABPA-201ENST00000354828 PLIN2Q99541 437 aa11.04□□□□□ -0.64
GABPA-201ENST00000354828 DDX19AQ9NUU7 478 aaKnown RBP11.04□□□□□ -0.64
GABPA-201ENST00000354828 SETBP1Q9Y6X0 1596 aa11.04□□□□□ -0.64
GABPA-201ENST00000354828 MACROD2A1Z1Q3 448 aa11.04□□□□□ -0.64
GABPA-201ENST00000354828 GRIN3BO60391 1043 aa11.04□□□□□ -0.64
GABPA-201ENST00000354828 ADCY7P51828 1080 aa11.04□□□□□ -0.64
GABPA-201ENST00000354828 TBC1D10BQ4KMP7 808 aaPredicted RBP11.04□□□□□ -0.64
GABPA-201ENST00000354828 TBC1D9BQ66K14 1250 aa11.04□□□□□ -0.64
GABPA-201ENST00000354828 TBC1D2Q9BYX2 928 aa11.04□□□□□ -0.64
GABPA-201ENST00000354828 SPATA31D1Q6ZQQ2 1576 aa11.03□□□□□ -0.64
GABPA-201ENST00000354828 ANKRD62A6NC57 917 aa11.03□□□□□ -0.64
GABPA-201ENST00000354828 HS2ST1Q7LGA3 356 aa11.03□□□□□ -0.64
GABPA-201ENST00000354828 DEFB132Q7Z7B7 95 aa11.03□□□□□ -0.64
GABPA-201ENST00000354828 CPLX3Q8WVH0 158 aa11.03□□□□□ -0.64
GABPA-201ENST00000354828 EAF2Q96CJ1 260 aaPredicted RBP11.03□□□□□ -0.64
GABPA-201ENST00000354828 ZNF277Q9NRM2 450 aaPredicted RBP11.03□□□□□ -0.64
GABPA-201ENST00000354828 ARGLU1Q9NWB6 273 aaPredicted RBP11.03□□□□□ -0.64
GABPA-201ENST00000354828 DKC1O60832 514 aaKnown RBP eCLIP11.03□□□□□ -0.64
GABPA-201ENST00000354828 NEFHP12036 1026 aa11.03□□□□□ -0.64
GABPA-201ENST00000354828 ARHGAP29Q52LW3 1261 aa11.03□□□□□ -0.64
GABPA-201ENST00000354828 LRRC47Q8N1G4 583 aaKnown RBP11.03□□□□□ -0.64
GABPA-201ENST00000354828 GLG1Q92896 1179 aa11.03□□□□□ -0.64
GABPA-201ENST00000354828 DHX58Q96C10 678 aa11.03□□□□□ -0.64
GABPA-201ENST00000354828 NUP88Q99567 741 aaPredicted RBP11.03□□□□□ -0.64
GABPA-201ENST00000354828 MYL10Q9BUA6 226 aa11.03□□□□□ -0.64
GABPA-201ENST00000354828 ADORA1P30542 326 aa11.03□□□□□ -0.64
GABPA-201ENST00000354828 KCTD2Q14681 263 aa11.03□□□□□ -0.64
GABPA-201ENST00000354828 SPOUT1Q5T280 376 aaKnown RBP11.03□□□□□ -0.64
GABPA-201ENST00000354828 CCDC183Q5T5S1 534 aa11.03□□□□□ -0.64
GABPA-201ENST00000354828 SYNE4Q8N205 404 aa11.03□□□□□ -0.64
GABPA-201ENST00000354828 COA1Q9GZY4 146 aa11.03□□□□□ -0.64
GABPA-201ENST00000354828 DEXIO95424 95 aa11.03□□□□□ -0.64
GABPA-201ENST00000354828 CPA1P15085 419 aa11.03□□□□□ -0.64
GABPA-201ENST00000354828 HSP90AA2PQ14568 343 aaPredicted RBP11.03□□□□□ -0.64
GABPA-201ENST00000354828 LZTS2Q9BRK4 669 aa11.03□□□□□ -0.64
GABPA-201ENST00000354828 TRIM6Q9C030 488 aaPredicted RBP11.03□□□□□ -0.64
GABPA-201ENST00000354828 MLXIPQ9HAP2 919 aa11.03□□□□□ -0.64
GABPA-201ENST00000354828 CARMIL3Q8ND23 1372 aa11.02□□□□□ -0.64
GABPA-201ENST00000354828 SLC27A2O14975 620 aa11.02□□□□□ -0.64
GABPA-201ENST00000354828 ZSCAN22P10073 491 aaPredicted RBP11.02□□□□□ -0.64
GABPA-201ENST00000354828 ZNF174Q15697 407 aa11.02□□□□□ -0.64
GABPA-201ENST00000354828 SSH3Q8TE77 659 aa11.02□□□□□ -0.64
GABPA-201ENST00000354828 CPSF1Q10570 1443 aaKnown RBP11.02□□□□□ -0.64
GABPA-201ENST00000354828 CCDC169A6NNP5 214 aa11.02□□□□□ -0.65
GABPA-201ENST00000354828 ACBD3Q9H3P7 528 aa11.02□□□□□ -0.65
GABPA-201ENST00000354828 USP31Q70CQ4 1352 aa11.02□□□□□ -0.65
GABPA-201ENST00000354828 LAMC1P11047 1609 aa11.02□□□□□ -0.65
GABPA-201ENST00000354828 A0A0G2JLW4 131 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms