RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 TRIM32Q13049 653 aa10.07□□□□□ -0.8
CD44-205ENST00000352818 DLGAP5Q15398 846 aa10.07□□□□□ -0.8
CD44-205ENST00000352818 RTL5Q5HYW3 569 aaPredicted RBP10.07□□□□□ -0.8
CD44-205ENST00000352818 COPS6Q7L5N1 327 aa10.07□□□□□ -0.8
CD44-205ENST00000352818 DNAAF4Q8WXU2 420 aa10.07□□□□□ -0.8
CD44-205ENST00000352818 HYPKQ9NX55 129 aa10.07□□□□□ -0.8
CD44-205ENST00000352818 REV3LO60673 3130 aa10.06□□□□□ -0.8
CD44-205ENST00000352818 ALDH1L1O75891 902 aa10.06□□□□□ -0.8
CD44-205ENST00000352818 ATP2B4P23634 1241 aa10.06□□□□□ -0.8
CD44-205ENST00000352818 FCGRTP55899 365 aa10.06□□□□□ -0.8
CD44-205ENST00000352818 ATP8B2P98198 1209 aa10.06□□□□□ -0.8
CD44-205ENST00000352818 IRF5Q13568 498 aa10.06□□□□□ -0.8
CD44-205ENST00000352818 HSP90AB3PQ58FF7 597 aa10.06□□□□□ -0.8
CD44-205ENST00000352818 TTLL5Q6EMB2 1281 aa10.06□□□□□ -0.8
CD44-205ENST00000352818 PLEKHM2Q8IWE5 1019 aa10.06□□□□□ -0.8
CD44-205ENST00000352818 XAGE3Q8WTP9 111 aa10.06□□□□□ -0.8
CD44-205ENST00000352818 ISCA1Q9BUE6 129 aa10.06□□□□□ -0.8
CD44-205ENST00000352818 SRCIN1Q9C0H9 1055 aa10.06□□□□□ -0.8
CD44-205ENST00000352818 PHAXQ9H814 394 aaKnown RBP10.06□□□□□ -0.8
CD44-205ENST00000352818 VEZTQ9HBM0 779 aa10.06□□□□□ -0.8
CD44-205ENST00000352818 OGDHLQ9ULD0 1010 aa10.06□□□□□ -0.8
CD44-205ENST00000352818 USP34Q70CQ2 3546 aa10.06□□□□□ -0.8
CD44-205ENST00000352818 CHD9Q3L8U1 2897 aa10.06□□□□□ -0.8
CD44-205ENST00000352818 CFAP54Q96N23 3096 aa10.05□□□□□ -0.8
CD44-205ENST00000352818 DDX60LQ5H9U9 1706 aaKnown RBP10.05□□□□□ -0.8
CD44-205ENST00000352818 PDHXO00330 501 aa10.05□□□□□ -0.8
CD44-205ENST00000352818 WDHD1O75717 1129 aaPredicted RBP10.05□□□□□ -0.8
CD44-205ENST00000352818 UBTFL1P0CB47 393 aaPredicted RBP10.05□□□□□ -0.8
CD44-205ENST00000352818 SMAD3P84022 425 aaKnown RBP10.05□□□□□ -0.8
CD44-205ENST00000352818 SNAPC2Q13487 334 aa10.05□□□□□ -0.8
CD44-205ENST00000352818 CFAP100Q494V2 611 aa10.05□□□□□ -0.8
CD44-205ENST00000352818 BEND3Q5T5X7 828 aa10.05□□□□□ -0.8
CD44-205ENST00000352818 TTC22Q5TAA0 569 aa10.05□□□□□ -0.8
CD44-205ENST00000352818 ANKRD23Q86SG2 305 aa10.05□□□□□ -0.8
CD44-205ENST00000352818 USP44Q9H0E7 712 aa10.05□□□□□ -0.8
CD44-205ENST00000352818 OSBPL3Q9H4L5 887 aa10.05□□□□□ -0.8
CD44-205ENST00000352818 HDAC5Q9UQL6 1122 aa10.05□□□□□ -0.8
CD44-205ENST00000352818 IRS4O14654 1257 aaPredicted RBP10.04□□□□□ -0.8
CD44-205ENST00000352818 CYP2C8P10632 490 aa10.04□□□□□ -0.8
CD44-205ENST00000352818 EIF2S2P20042 333 aaKnown RBP10.04□□□□□ -0.8
CD44-205ENST00000352818 GTF2IP78347 998 aa10.04□□□□□ -0.8
CD44-205ENST00000352818 AIMP1Q12904 312 aaKnown RBP10.04□□□□□ -0.8
CD44-205ENST00000352818 PPIL2Q13356 520 aa10.04□□□□□ -0.8
CD44-205ENST00000352818 MTX1Q13505 466 aa10.04□□□□□ -0.8
CD44-205ENST00000352818 POLA2Q14181 598 aa10.04□□□□□ -0.8
CD44-205ENST00000352818 POTEEQ6S8J3 1075 aa10.04□□□□□ -0.8
CD44-205ENST00000352818 KSR2Q6VAB6 950 aa10.04□□□□□ -0.8
CD44-205ENST00000352818 ERO1BQ86YB8 467 aa10.04□□□□□ -0.8
CD44-205ENST00000352818 SSH3Q8TE77 659 aa10.04□□□□□ -0.8
CD44-205ENST00000352818 COA1Q9GZY4 146 aa10.04□□□□□ -0.8
CD44-205ENST00000352818 UTYO14607 1347 aa10.04□□□□□ -0.8
CD44-205ENST00000352818 SALL3Q9BXA9 1300 aa10.04□□□□□ -0.8
CD44-205ENST00000352818 PI4KAP2A4QPH2 592 aa10.03□□□□□ -0.8
CD44-205ENST00000352818 ATP5J2-PTCD1G3V325 749 aa10.03□□□□□ -0.8
CD44-205ENST00000352818 DDX58O95786 925 aaKnown RBP10.03□□□□□ -0.8
CD44-205ENST00000352818 BMP1P13497 986 aa10.03□□□□□ -0.8
CD44-205ENST00000352818 RBM25P49756 843 aaKnown RBP10.03□□□□□ -0.8
CD44-205ENST00000352818 MRPS5P82675 430 aaKnown RBP10.03□□□□□ -0.8
CD44-205ENST00000352818 BECN1Q14457 450 aa10.03□□□□□ -0.8
CD44-205ENST00000352818 GPAT2Q6NUI2 795 aa10.03□□□□□ -0.8
CD44-205ENST00000352818 PI4KAP1Q8N8J0 262 aa10.03□□□□□ -0.8
CD44-205ENST00000352818 KHSRPQ92945 711 aaKnown RBP eCLIP10.03□□□□□ -0.8
CD44-205ENST00000352818 ZKSCAN4Q969J2 545 aaPredicted RBP10.03□□□□□ -0.8
CD44-205ENST00000352818 TMEM39BQ9GZU3 492 aa10.03□□□□□ -0.8
CD44-205ENST00000352818 THEGQ9P2T0 379 aa10.03□□□□□ -0.8
CD44-205ENST00000352818 LRRFIP2Q9Y608 721 aaKnown RBP10.03□□□□□ -0.8
CD44-205ENST00000352818 CDC45O75419 566 aa10.02□□□□□ -0.81
CD44-205ENST00000352818 GSPT1P15170 499 aaKnown RBP10.02□□□□□ -0.81
CD44-205ENST00000352818 TMEM31Q5JXX7 168 aa10.02□□□□□ -0.81
CD44-205ENST00000352818 LINS1Q8NG48 757 aa10.02□□□□□ -0.81
CD44-205ENST00000352818 PPM1EQ8WY54 764 aa10.02□□□□□ -0.81
CD44-205ENST00000352818 CCDC85AQ96PX6 553 aaPredicted RBP10.02□□□□□ -0.81
CD44-205ENST00000352818 C22orf23Q9BZE7 217 aa10.02□□□□□ -0.81
CD44-205ENST00000352818 DAXXQ9UER7 740 aaPredicted RBP10.02□□□□□ -0.81
CD44-205ENST00000352818 MINPP1Q9UNW1 487 aa10.02□□□□□ -0.81
CD44-205ENST00000352818 CSADQ9Y600 493 aa10.02□□□□□ -0.81
CD44-205ENST00000352818 ZFHX4Q86UP3 3567 aa10.02□□□□□ -0.81
CD44-205ENST00000352818 PNMA6EA0A0J9YXQ4 647 aa10.01□□□□□ -0.81
CD44-205ENST00000352818 FAM86C2PA6NEL3 165 aa10.01□□□□□ -0.81
CD44-205ENST00000352818 F8W031 263 aaPredicted RBP10.01□□□□□ -0.81
CD44-205ENST00000352818 RAB11FIP3O75154 756 aa10.01□□□□□ -0.81
CD44-205ENST00000352818 SPDYE2Q495Y8 402 aa10.01□□□□□ -0.81
CD44-205ENST00000352818 LRRCC1Q9C099 1032 aa10.01□□□□□ -0.81
CD44-205ENST00000352818 ZNF70Q9UC06 446 aaPredicted RBP10.01□□□□□ -0.81
CD44-205ENST00000352818 CHD7Q9P2D1 2997 aa10.01□□□□□ -0.81
CD44-205ENST00000352818 GPR37L1O60883 481 aa10□□□□□ -0.81
CD44-205ENST00000352818 MFAP1P55081 439 aaKnown RBP10□□□□□ -0.81
CD44-205ENST00000352818 HSP90AB4PQ58FF6 505 aa10□□□□□ -0.81
CD44-205ENST00000352818 TBC1D9Q6ZT07 1266 aa10□□□□□ -0.81
CD44-205ENST00000352818 ZBTB38Q8NAP3 1195 aaPredicted RBP10□□□□□ -0.81
CD44-205ENST00000352818 LBHD1Q9BQE6 289 aaPredicted RBP10□□□□□ -0.81
CD44-205ENST00000352818 KCNH4Q9UQ05 1017 aa10□□□□□ -0.81
CD44-205ENST00000352818 MAP3K2Q9Y2U5 619 aa10□□□□□ -0.81
CD44-205ENST00000352818 CACNA1GO43497 2377 aa10□□□□□ -0.81
CD44-205ENST00000352818 ZDBF2Q9HCK1 2354 aa9.99□□□□□ -0.81
CD44-205ENST00000352818 PDE1AP54750 535 aa9.99□□□□□ -0.81
CD44-205ENST00000352818 ADGRE1Q14246 886 aa9.99□□□□□ -0.81
CD44-205ENST00000352818 MAP3K21Q5TCX8 1036 aa9.99□□□□□ -0.81
CD44-205ENST00000352818 WRNIP1Q96S55 665 aa9.99□□□□□ -0.81
CD44-205ENST00000352818 TAOK2Q9UL54 1235 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms