RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 PBX4Q9BYU1 374 aa11.75□□□□□ -0.53
UBE2D3-205ENST00000350435 CD209Q9NNX6 404 aa11.75□□□□□ -0.53
UBE2D3-205ENST00000350435 PDLIM7Q9NR12 457 aa11.75□□□□□ -0.53
UBE2D3-205ENST00000350435 GJD2Q9UKL4 321 aa11.75□□□□□ -0.53
UBE2D3-205ENST00000350435 COG5Q9UP83 839 aa11.75□□□□□ -0.53
UBE2D3-205ENST00000350435 SLC45A1Q9Y2W3 748 aa11.75□□□□□ -0.53
UBE2D3-205ENST00000350435 RGS20O76081 388 aa11.74□□□□□ -0.53
UBE2D3-205ENST00000350435 CYP2B6P20813 491 aa11.74□□□□□ -0.53
UBE2D3-205ENST00000350435 CCND3P30281 292 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-205ENST00000350435 INPP5BP32019 993 aa11.74□□□□□ -0.53
UBE2D3-205ENST00000350435 PBX2P40425 430 aa11.74□□□□□ -0.53
UBE2D3-205ENST00000350435 EPHB4P54760 987 aa11.74□□□□□ -0.53
UBE2D3-205ENST00000350435 CACNB2Q08289 660 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-205ENST00000350435 GADL1Q6ZQY3 521 aa11.74□□□□□ -0.53
UBE2D3-205ENST00000350435 RSPH6AQ9H0K4 717 aa11.74□□□□□ -0.53
UBE2D3-205ENST00000350435 BSDC1Q9NW68 430 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-205ENST00000350435 RPAP1Q9BWH6 1393 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-205ENST00000350435 GBF1Q92538 1859 aa11.74□□□□□ -0.53
UBE2D3-205ENST00000350435 PTPRFP10586 1907 aa11.74□□□□□ -0.53
UBE2D3-205ENST00000350435 ZNF318Q5VUA4 2279 aa11.74□□□□□ -0.53
UBE2D3-205ENST00000350435 TRIM43BA6NCK2 446 aa11.73□□□□□ -0.53
UBE2D3-205ENST00000350435 PDE8AO60658 829 aa11.73□□□□□ -0.53
UBE2D3-205ENST00000350435 KLRK1P26718 216 aa11.73□□□□□ -0.53
UBE2D3-205ENST00000350435 SLC39A5Q6ZMH5 540 aa11.73□□□□□ -0.53
UBE2D3-205ENST00000350435 TRMT44Q8IYL2 757 aaKnown RBP11.73□□□□□ -0.53
UBE2D3-205ENST00000350435 TRIM43Q96BQ3 446 aaPredicted RBP11.73□□□□□ -0.53
UBE2D3-205ENST00000350435 CHD7Q9P2D1 2997 aa11.73□□□□□ -0.53
UBE2D3-205ENST00000350435 DLG5Q8TDM6 1919 aa11.72□□□□□ -0.53
UBE2D3-205ENST00000350435 DNM1LO00429 736 aa11.72□□□□□ -0.53
UBE2D3-205ENST00000350435 ZKSCAN1P17029 563 aaPredicted RBP11.72□□□□□ -0.53
UBE2D3-205ENST00000350435 FPGSQ05932 587 aa11.72□□□□□ -0.53
UBE2D3-205ENST00000350435 SH3RF1Q7Z6J0 888 aa11.72□□□□□ -0.53
UBE2D3-205ENST00000350435 DZIP1LQ8IYY4 767 aaKnown RBP11.72□□□□□ -0.53
UBE2D3-205ENST00000350435 PLBD2Q8NHP8 589 aa11.72□□□□□ -0.53
UBE2D3-205ENST00000350435 CD320Q9NPF0 282 aa11.72□□□□□ -0.53
UBE2D3-205ENST00000350435 MSRAQ9UJ68 235 aa11.72□□□□□ -0.53
UBE2D3-205ENST00000350435 SERPINA10Q9UK55 444 aa11.72□□□□□ -0.53
UBE2D3-205ENST00000350435 MYH3P11055 1940 aa11.72□□□□□ -0.53
UBE2D3-205ENST00000350435 KMT2BQ9UMN6 2715 aaPredicted RBP11.71□□□□□ -0.53
UBE2D3-205ENST00000350435 A0A0G2JLL6 359 aaPredicted RBP11.71□□□□□ -0.53
UBE2D3-205ENST00000350435 KCNJ4P48050 445 aa11.71□□□□□ -0.53
UBE2D3-205ENST00000350435 PTPN5P54829 565 aa11.71□□□□□ -0.53
UBE2D3-205ENST00000350435 TRIM60Q495X7 471 aa11.71□□□□□ -0.53
UBE2D3-205ENST00000350435 MIGA2Q7L4E1 593 aa11.71□□□□□ -0.53
UBE2D3-205ENST00000350435 PRRT2Q7Z6L0 340 aaPredicted RBP11.71□□□□□ -0.53
UBE2D3-205ENST00000350435 A0A0G2JMZ2 1700 aa11.71□□□□□ -0.54
UBE2D3-205ENST00000350435 GRXCR1A8MXD5 290 aa11.7□□□□□ -0.54
UBE2D3-205ENST00000350435 XRCC5P13010 732 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-205ENST00000350435 RAB30Q15771 203 aa11.7□□□□□ -0.54
UBE2D3-205ENST00000350435 ANKRD2Q9GZV1 360 aa11.7□□□□□ -0.54
UBE2D3-205ENST00000350435 SLC28A3Q9HAS3 691 aa11.7□□□□□ -0.54
UBE2D3-205ENST00000350435 PNMA3Q9UL41 463 aa11.7□□□□□ -0.54
UBE2D3-205ENST00000350435 TTF2Q9UNY4 1162 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-205ENST00000350435 TRANK1O15050 2925 aa11.7□□□□□ -0.54
UBE2D3-205ENST00000350435 DCHS1Q96JQ0 3298 aa11.7□□□□□ -0.54
UBE2D3-205ENST00000350435 MYBBP1AQ9BQG0 1328 aaKnown RBP11.69□□□□□ -0.54
UBE2D3-205ENST00000350435 RAG1P15918 1043 aa11.69□□□□□ -0.54
UBE2D3-205ENST00000350435 TRIM28Q13263 835 aaKnown RBP11.69□□□□□ -0.54
UBE2D3-205ENST00000350435 GJD3Q8N144 294 aa11.69□□□□□ -0.54
UBE2D3-205ENST00000350435 LPAR1Q92633 364 aa11.69□□□□□ -0.54
UBE2D3-205ENST00000350435 HLA-CQ95604 372 aa11.69□□□□□ -0.54
UBE2D3-205ENST00000350435 MFSD14AQ96MC6 490 aa11.69□□□□□ -0.54
UBE2D3-205ENST00000350435 NUDT12Q9BQG2 462 aa11.69□□□□□ -0.54
UBE2D3-205ENST00000350435 TMOD2Q9NZR1 351 aa11.69□□□□□ -0.54
UBE2D3-205ENST00000350435 JAG2Q9Y219 1238 aa11.69□□□□□ -0.54
UBE2D3-205ENST00000350435 TACC3Q9Y6A5 838 aa11.69□□□□□ -0.54
UBE2D3-205ENST00000350435 GTPBP6O43824 516 aaPredicted RBP11.68□□□□□ -0.54
UBE2D3-205ENST00000350435 MSCO60682 206 aa11.68□□□□□ -0.54
UBE2D3-205ENST00000350435 SSTR3P32745 418 aaPredicted RBP11.68□□□□□ -0.54
UBE2D3-205ENST00000350435 CACNB3P54284 484 aa11.68□□□□□ -0.54
UBE2D3-205ENST00000350435 NOL9Q5SY16 702 aaKnown RBP11.68□□□□□ -0.54
UBE2D3-205ENST00000350435 FAM83AQ86UY5 434 aa11.68□□□□□ -0.54
UBE2D3-205ENST00000350435 SOCS4Q8WXH5 440 aa11.68□□□□□ -0.54
UBE2D3-205ENST00000350435 KBTBD13C9JR72 458 aa11.67□□□□□ -0.54
UBE2D3-205ENST00000350435 IL1R1P14778 569 aa11.67□□□□□ -0.54
UBE2D3-205ENST00000350435 CRKP46108 304 aa11.67□□□□□ -0.54
UBE2D3-205ENST00000350435 ID4P47928 161 aa11.67□□□□□ -0.54
UBE2D3-205ENST00000350435 GCLCP48506 637 aaPredicted RBP11.67□□□□□ -0.54
UBE2D3-205ENST00000350435 KCTD2Q14681 263 aa11.67□□□□□ -0.54
UBE2D3-205ENST00000350435 SNX17Q15036 470 aa11.67□□□□□ -0.54
UBE2D3-205ENST00000350435 ZNF804AQ7Z570 1209 aa11.67□□□□□ -0.54
UBE2D3-205ENST00000350435 NKX2-4Q9H2Z4 354 aa11.67□□□□□ -0.54
UBE2D3-205ENST00000350435 DDX20Q9UHI6 824 aaKnown RBP11.67□□□□□ -0.54
UBE2D3-205ENST00000350435 ZNF112Q9UJU3 913 aa11.67□□□□□ -0.54
UBE2D3-205ENST00000350435 PRRC2BQ5JSZ5 2229 aaKnown RBP11.67□□□□□ -0.54
UBE2D3-205ENST00000350435 CLTBP09497 229 aa11.66□□□□□ -0.54
UBE2D3-205ENST00000350435 CNGA1P29973 690 aa11.66□□□□□ -0.54
UBE2D3-205ENST00000350435 IGHMBP2P38935 993 aaKnown RBP11.66□□□□□ -0.54
UBE2D3-205ENST00000350435 AMER1Q5JTC6 1135 aaPredicted RBP11.66□□□□□ -0.54
UBE2D3-205ENST00000350435 GJC2Q5T442 439 aaPredicted RBP11.66□□□□□ -0.54
UBE2D3-205ENST00000350435 CCDC174Q6PII3 467 aa11.66□□□□□ -0.54
UBE2D3-205ENST00000350435 ARRDC4Q8NCT1 418 aa11.66□□□□□ -0.54
UBE2D3-205ENST00000350435 PRSS33Q8NF86 280 aa11.66□□□□□ -0.54
UBE2D3-205ENST00000350435 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.66□□□□□ -0.545e-7■■■■□ 24.9
UBE2D3-205ENST00000350435 AGTPBP1Q9UPW5 1226 aa11.66□□□□□ -0.54
UBE2D3-205ENST00000350435 ZHX2Q9Y6X8 837 aa11.66□□□□□ -0.54
UBE2D3-205ENST00000350435 ZFHX4Q86UP3 3567 aa11.66□□□□□ -0.54
UBE2D3-205ENST00000350435 ZFHX2Q9C0A1 2572 aaPredicted RBP11.65□□□□□ -0.54
UBE2D3-205ENST00000350435 DCXO43602 365 aa11.65□□□□□ -0.54
UBE2D3-205ENST00000350435 PCCAP05165 728 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms