RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 CLMNQ96JQ2 1002 aa26.86■■□□□ 1.89
SNX3-202ENST00000349379 SALL3Q9BXA9 1300 aa26.86■■□□□ 1.89
SNX3-202ENST00000349379 KIF23Q02241 960 aaPredicted RBP26.85■■□□□ 1.89
SNX3-202ENST00000349379 DCAF15Q66K64 600 aa26.85■■□□□ 1.89
SNX3-202ENST00000349379 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.85■■□□□ 1.89
SNX3-202ENST00000349379 NOL10Q9BSC4 688 aaKnown RBP26.85■■□□□ 1.89
SNX3-202ENST00000349379 TEX11Q8IYF3 940 aa26.84■■□□□ 1.89
SNX3-202ENST00000349379 RWDD1Q9H446 243 aaPredicted RBP26.84■■□□□ 1.89
SNX3-202ENST00000349379 DDX60LQ5H9U9 1706 aaKnown RBP26.84■■□□□ 1.89
SNX3-202ENST00000349379 TTC41PQ6P2S7 1318 aa26.84■■□□□ 1.89
SNX3-202ENST00000349379 DDTLA6NHG4 134 aaPredicted RBP26.83■■□□□ 1.89
SNX3-202ENST00000349379 PDE6AP16499 860 aa26.83■■□□□ 1.89
SNX3-202ENST00000349379 MAP3K9P80192 1104 aa26.83■■□□□ 1.89
SNX3-202ENST00000349379 MAP3K10Q02779 954 aa26.83■■□□□ 1.89
SNX3-202ENST00000349379 PICALMQ13492 652 aa26.83■■□□□ 1.89
SNX3-202ENST00000349379 SPRYD7Q5W111 196 aa26.83■■□□□ 1.89
SNX3-202ENST00000349379 CERS3Q8IU89 383 aa26.83■■□□□ 1.89
SNX3-202ENST00000349379 OTUD7AQ8TE49 926 aaPredicted RBP26.83■■□□□ 1.89
SNX3-202ENST00000349379 GPATCH3Q96I76 525 aa26.83■■□□□ 1.89
SNX3-202ENST00000349379 TCRBV5S4A2TA0A5A2 114 aa26.82■■□□□ 1.88
SNX3-202ENST00000349379 FOXN1O15353 648 aa26.82■■□□□ 1.88
SNX3-202ENST00000349379 IGHDP01880 384 aa26.82■■□□□ 1.88
SNX3-202ENST00000349379 ANKRD45Q5TZF3 282 aa26.82■■□□□ 1.88
SNX3-202ENST00000349379 SLC10A4Q96EP9 437 aa26.82■■□□□ 1.88
SNX3-202ENST00000349379 ZNF341Q9BYN7 854 aa26.82■■□□□ 1.88
SNX3-202ENST00000349379 OSBPL5Q9H0X9 879 aaPredicted RBP26.82■■□□□ 1.88
SNX3-202ENST00000349379 ZNF112Q9UJU3 913 aa26.82■■□□□ 1.88
SNX3-202ENST00000349379 DOCK1Q14185 1865 aa26.82■■□□□ 1.88
SNX3-202ENST00000349379 NAV1Q8NEY1 1877 aa26.82■■□□□ 1.88
SNX3-202ENST00000349379 DYNLL1P63167 89 aaKnown RBP26.81■■□□□ 1.88
SNX3-202ENST00000349379 IRX6P78412 446 aaPredicted RBP26.81■■□□□ 1.88
SNX3-202ENST00000349379 VGLL4Q14135 290 aa26.81■■□□□ 1.88
SNX3-202ENST00000349379 SLC9C2Q5TAH2 1124 aa26.81■■□□□ 1.88
SNX3-202ENST00000349379 TSHZ3Q63HK5 1081 aa26.81■■□□□ 1.88
SNX3-202ENST00000349379 MIGA2Q7L4E1 593 aa26.81■■□□□ 1.88
SNX3-202ENST00000349379 REM2Q8IYK8 340 aaPredicted RBP26.81■■□□□ 1.88
SNX3-202ENST00000349379 WNK4Q96J92 1243 aa26.81■■□□□ 1.88
SNX3-202ENST00000349379 CSRNP1Q96S65 589 aa26.81■■□□□ 1.88
SNX3-202ENST00000349379 ATAD5Q96QE3 1844 aa26.81■■□□□ 1.88
SNX3-202ENST00000349379 ZBTB48P10074 688 aaPredicted RBP26.8■■□□□ 1.88
SNX3-202ENST00000349379 MIGA1Q8NAN2 632 aa26.8■■□□□ 1.88
SNX3-202ENST00000349379 PI4K2BQ8TCG2 481 aa26.8■■□□□ 1.88
SNX3-202ENST00000349379 AIDAQ96BJ3 306 aa26.8■■□□□ 1.88
SNX3-202ENST00000349379 WRNIP1Q96S55 665 aa26.8■■□□□ 1.88
SNX3-202ENST00000349379 RIOK1Q9BRS2 568 aaKnown RBP26.8■■□□□ 1.88
SNX3-202ENST00000349379 ADD2P35612 726 aa26.79■■□□□ 1.88
SNX3-202ENST00000349379 SNCAIPQ9Y6H5 919 aa26.79■■□□□ 1.88
SNX3-202ENST00000349379 ZNF532Q9HCE3 1301 aa26.79■■□□□ 1.88
SNX3-202ENST00000349379 PHIPQ8WWQ0 1821 aa26.79■■□□□ 1.88
SNX3-202ENST00000349379 MX1P20591 662 aa26.78■■□□□ 1.88
SNX3-202ENST00000349379 GJA5P36382 358 aa26.78■■□□□ 1.88
SNX3-202ENST00000349379 ZSCAN29Q8IWY8 852 aaPredicted RBP26.78■■□□□ 1.88
SNX3-202ENST00000349379 TGFBRAP1Q8WUH2 860 aa26.78■■□□□ 1.88
SNX3-202ENST00000349379 FLT1P17948 1338 aa26.78■■□□□ 1.88
SNX3-202ENST00000349379 CA12O43570 354 aa26.77■■□□□ 1.88
SNX3-202ENST00000349379 TBC1D12O60347 775 aa26.77■■□□□ 1.88
SNX3-202ENST00000349379 ELP3Q9H9T3 547 aa26.77■■□□□ 1.88
SNX3-202ENST00000349379 CSADQ9Y600 493 aa26.77■■□□□ 1.88
SNX3-202ENST00000349379 PHF20L1A8MW92 1017 aa26.76■■□□□ 1.87
SNX3-202ENST00000349379 ERC2O15083 957 aa26.76■■□□□ 1.87
SNX3-202ENST00000349379 INPP5BP32019 993 aa26.76■■□□□ 1.87
SNX3-202ENST00000349379 TM4SF4P48230 202 aa26.76■■□□□ 1.87
SNX3-202ENST00000349379 CTCFP49711 727 aaPredicted RBP26.76■■□□□ 1.87
SNX3-202ENST00000349379 MKRN3Q13064 507 aaKnown RBP26.76■■□□□ 1.87
SNX3-202ENST00000349379 KBTBD3Q8NAB2 608 aa26.76■■□□□ 1.87
SNX3-202ENST00000349379 BEGAINQ9BUH8 593 aa26.76■■□□□ 1.87
SNX3-202ENST00000349379 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.76■■□□□ 1.87
SNX3-202ENST00000349379 STAP2Q9UGK3 403 aa26.76■■□□□ 1.87
SNX3-202ENST00000349379 PTPRFP10586 1907 aa26.75■■□□□ 1.87
SNX3-202ENST00000349379 SPDYE5A6NIY4 337 aa26.75■■□□□ 1.87
SNX3-202ENST00000349379 GLRX3O76003 335 aaKnown RBP26.75■■□□□ 1.87
SNX3-202ENST00000349379 HSPA8P11142 646 aaKnown RBP26.75■■□□□ 1.87
SNX3-202ENST00000349379 UBE3CQ15386 1083 aa26.75■■□□□ 1.87
SNX3-202ENST00000349379 NOL9Q5SY16 702 aaKnown RBP26.75■■□□□ 1.87
SNX3-202ENST00000349379 MAPKAPK5Q8IW41 473 aa26.75■■□□□ 1.87
SNX3-202ENST00000349379 ZKSCAN4Q969J2 545 aaPredicted RBP26.75■■□□□ 1.87
SNX3-202ENST00000349379 OPTNQ96CV9 577 aa26.75■■□□□ 1.87
SNX3-202ENST00000349379 ZBTB47Q9UFB7 747 aaPredicted RBP26.75■■□□□ 1.87
SNX3-202ENST00000349379 BAZ2AQ9UIF9 1905 aaKnown RBP26.75■■□□□ 1.87
SNX3-202ENST00000349379 MAGEB6P1A0A0J9YX57 407 aa26.74■■□□□ 1.87
SNX3-202ENST00000349379 SLURP2P0DP57 97 aa26.74■■□□□ 1.87
SNX3-202ENST00000349379 CNKSR2Q8WXI2 1034 aa26.74■■□□□ 1.87
SNX3-202ENST00000349379 DHX36Q9H2U1 1008 aaKnown RBP26.74■■□□□ 1.87
SNX3-202ENST00000349379 SAGE1Q9NXZ1 904 aa26.74■■□□□ 1.87
SNX3-202ENST00000349379 MANSC4A6NHS7 340 aaPredicted RBP26.73■■□□□ 1.87
SNX3-202ENST00000349379 CHGBP05060 677 aa26.73■■□□□ 1.87
SNX3-202ENST00000349379 SLFNL1Q499Z3 407 aa26.73■■□□□ 1.87
SNX3-202ENST00000349379 ERO1BQ86YB8 467 aa26.73■■□□□ 1.87
SNX3-202ENST00000349379 PDE1AP54750 535 aa26.72■■□□□ 1.87
SNX3-202ENST00000349379 NUCB1Q02818 461 aa26.72■■□□□ 1.87
SNX3-202ENST00000349379 SREBF2Q12772 1141 aa26.72■■□□□ 1.87
SNX3-202ENST00000349379 ZSCAN25Q6NSZ9 544 aa26.72■■□□□ 1.87
SNX3-202ENST00000349379 METTL16Q86W50 562 aaKnown RBP26.72■■□□□ 1.87
SNX3-202ENST00000349379 LNPKQ9C0E8 428 aa26.72■■□□□ 1.87
SNX3-202ENST00000349379 RNF186Q9NXI6 227 aa26.72■■□□□ 1.87
SNX3-202ENST00000349379 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.72■■□□□ 1.87
SNX3-202ENST00000349379 CASP8AP2Q9UKL3 1982 aa26.71■■□□□ 1.87
SNX3-202ENST00000349379 CHD1LQ86WJ1 897 aa26.71■■□□□ 1.87
SNX3-202ENST00000349379 LCORLQ8N3X6 602 aa26.71■■□□□ 1.87
SNX3-202ENST00000349379 PI4KBQ9UBF8 816 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms