RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 BCL9LQ86UU0 1499 aa24.82■■□□□ 1.56
CCDC38-201ENST00000344280 MAP3K14Q99558 947 aa24.82■■□□□ 1.56
CCDC38-201ENST00000344280 CCDC69A6NI79 296 aa24.81■■□□□ 1.56
CCDC38-201ENST00000344280 KCNQ4P56696 695 aa24.81■■□□□ 1.56
CCDC38-201ENST00000344280 GNL2Q13823 731 aaKnown RBP24.81■■□□□ 1.56
CCDC38-201ENST00000344280 PDCL3Q9H2J4 239 aa24.81■■□□□ 1.56
CCDC38-201ENST00000344280 SHC4Q6S5L8 630 aa24.81■■□□□ 1.56
CCDC38-201ENST00000344280 SMIM5Q71RC9 77 aa24.81■■□□□ 1.56
CCDC38-201ENST00000344280 CMTR1Q8N1G2 835 aaKnown RBP24.81■■□□□ 1.56
CCDC38-201ENST00000344280 STAG1Q8WVM7 1258 aa24.81■■□□□ 1.56
CCDC38-201ENST00000344280 THRAP3Q9Y2W1 955 aaKnown RBP24.81■■□□□ 1.56
CCDC38-201ENST00000344280 PNPLA7Q6ZV29 1317 aa24.8■■□□□ 1.56
CCDC38-201ENST00000344280 SLC3A2P08195 630 aaKnown RBP24.8■■□□□ 1.56
CCDC38-201ENST00000344280 U2AF2P26368 475 aaKnown RBP eCLIP24.8■■□□□ 1.56
CCDC38-201ENST00000344280 GYG1P46976 350 aa24.8■■□□□ 1.56
CCDC38-201ENST00000344280 SDR42E1Q8WUS8 393 aa24.8■■□□□ 1.56
CCDC38-201ENST00000344280 CLIC6Q96NY7 704 aa24.8■■□□□ 1.56
CCDC38-201ENST00000344280 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.8■■□□□ 1.56
CCDC38-201ENST00000344280 CNNM2Q9H8M5 875 aa24.8■■□□□ 1.56
CCDC38-201ENST00000344280 RTL9Q8NET4 1388 aa24.8■■□□□ 1.56
CCDC38-201ENST00000344280 RREB1Q92766 1687 aa24.79■■□□□ 1.56
CCDC38-201ENST00000344280 CCDC82Q8N4S0 544 aa24.79■■□□□ 1.56
CCDC38-201ENST00000344280 KRT23Q9C075 422 aa24.79■■□□□ 1.56
CCDC38-201ENST00000344280 ABCF2Q9UG63 623 aa24.79■■□□□ 1.56
CCDC38-201ENST00000344280 NUTM2BA6NNL0 878 aaPredicted RBP24.79■■□□□ 1.56
CCDC38-201ENST00000344280 NUTM2EB1AL46 878 aaPredicted RBP24.79■■□□□ 1.56
CCDC38-201ENST00000344280 ERFEQ4G0M1 354 aa24.79■■□□□ 1.56
CCDC38-201ENST00000344280 ISM2Q6H9L7 571 aa24.79■■□□□ 1.56
CCDC38-201ENST00000344280 NUTM2AQ8IVF1 878 aaPredicted RBP24.79■■□□□ 1.56
CCDC38-201ENST00000344280 LRRC8AQ8IWT6 810 aa24.79■■□□□ 1.56
CCDC38-201ENST00000344280 RGS22Q8NE09 1264 aa24.79■■□□□ 1.56
CCDC38-201ENST00000344280 NAT10Q9H0A0 1025 aaKnown RBP24.79■■□□□ 1.56
CCDC38-201ENST00000344280 NRAPQ86VF7 1730 aa24.79■■□□□ 1.56
CCDC38-201ENST00000344280 TIAM2Q8IVF5 1701 aa24.79■■□□□ 1.56
CCDC38-201ENST00000344280 TAF1P21675 1872 aa24.79■■□□□ 1.56
CCDC38-201ENST00000344280 GTF2F1P35269 517 aaKnown RBP eCLIP24.78■■□□□ 1.56
CCDC38-201ENST00000344280 SSRP1Q08945 709 aaKnown RBP24.78■■□□□ 1.56
CCDC38-201ENST00000344280 NACAP1Q9BZK3 213 aa24.78■■□□□ 1.56
CCDC38-201ENST00000344280 BCORQ6W2J9 1755 aa24.78■■□□□ 1.56
CCDC38-201ENST00000344280 FMNL1O95466 1100 aaPredicted RBP24.78■■□□□ 1.56
CCDC38-201ENST00000344280 CYP7A1P22680 504 aa24.78■■□□□ 1.56
CCDC38-201ENST00000344280 FILIP1Q7Z7B0 1213 aa24.78■■□□□ 1.56
CCDC38-201ENST00000344280 C16orf45Q96MC5 204 aaPredicted RBP24.78■■□□□ 1.56
CCDC38-201ENST00000344280 GNAT2P19087 354 aa24.77■■□□□ 1.56
CCDC38-201ENST00000344280 HPSEQ9Y251 543 aa24.77■■□□□ 1.56
CCDC38-201ENST00000344280 COL1A1P02452 1464 aaPredicted RBP24.77■■□□□ 1.56
CCDC38-201ENST00000344280 SPATA31A5Q5VU36 1347 aa24.77■■□□□ 1.56
CCDC38-201ENST00000344280 SPATA31A7Q8IWB4 1347 aa24.77■■□□□ 1.56
CCDC38-201ENST00000344280 IFNAR1P17181 557 aa24.77■■□□□ 1.56
CCDC38-201ENST00000344280 TRIM29Q14134 588 aa24.77■■□□□ 1.56
CCDC38-201ENST00000344280 KCNJ14Q9UNX9 436 aa24.77■■□□□ 1.56
CCDC38-201ENST00000344280 BTBD18B2RXH4 712 aa24.76■■□□□ 1.55
CCDC38-201ENST00000344280 PPP6R2O75170 966 aa24.76■■□□□ 1.55
CCDC38-201ENST00000344280 SYKP43405 635 aa24.76■■□□□ 1.55
CCDC38-201ENST00000344280 WTAPQ15007 396 aa24.76■■□□□ 1.55
CCDC38-201ENST00000344280 NBPF11Q86T75 865 aa24.76■■□□□ 1.55
CCDC38-201ENST00000344280 RIOK3O14730 519 aaKnown RBP24.75■■□□□ 1.55
CCDC38-201ENST00000344280 PPARAQ07869 468 aa24.75■■□□□ 1.55
CCDC38-201ENST00000344280 ZRSR1Q15695 479 aaKnown RBP24.75■■□□□ 1.55
CCDC38-201ENST00000344280 STK36Q9NRP7 1315 aa24.75■■□□□ 1.55
CCDC38-201ENST00000344280 MINDY4BA8MYZ0 360 aa24.75■■□□□ 1.55
CCDC38-201ENST00000344280 LINC00116Q8NCU8 138 aa24.75■■□□□ 1.55
CCDC38-201ENST00000344280 ZNF804BA4D1E1 1349 aa24.75■■□□□ 1.55
CCDC38-201ENST00000344280 NLRP12P59046 1061 aa24.74■■□□□ 1.55
CCDC38-201ENST00000344280 RTN1Q16799 776 aa24.74■■□□□ 1.55
CCDC38-201ENST00000344280 BICDL1Q6ZP65 573 aa24.74■■□□□ 1.55
CCDC38-201ENST00000344280 ZNF710Q8N1W2 664 aa24.74■■□□□ 1.55
CCDC38-201ENST00000344280 CDC5LQ99459 802 aaKnown RBP24.74■■□□□ 1.55
CCDC38-201ENST00000344280 RAI14Q9P0K7 980 aa24.74■■□□□ 1.55
CCDC38-201ENST00000344280 LAMB2P55268 1798 aa24.74■■□□□ 1.55
CCDC38-201ENST00000344280 NCAPHQ15003 741 aa24.74■■□□□ 1.55
CCDC38-201ENST00000344280 TOB1P50616 345 aaPredicted RBP24.73■■□□□ 1.55
CCDC38-201ENST00000344280 RBM6P78332 1123 aaKnown RBP24.73■■□□□ 1.55
CCDC38-201ENST00000344280 SPECC1Q5M775 1068 aa24.73■■□□□ 1.55
CCDC38-201ENST00000344280 BPIFA3Q9BQP9 254 aa24.73■■□□□ 1.55
CCDC38-201ENST00000344280 NID2Q14112 1375 aa24.73■■□□□ 1.55
CCDC38-201ENST00000344280 USP27XA6NNY8 438 aa24.73■■□□□ 1.55
CCDC38-201ENST00000344280 MMP1P03956 469 aa24.73■■□□□ 1.55
CCDC38-201ENST00000344280 PNOCQ13519 176 aa24.73■■□□□ 1.55
CCDC38-201ENST00000344280 RESP18Q5W5W9 173 aa24.73■■□□□ 1.55
CCDC38-201ENST00000344280 ANKRD18AQ8IVF6 992 aa24.73■■□□□ 1.55
CCDC38-201ENST00000344280 NOSTRINQ8IVI9 506 aa24.73■■□□□ 1.55
CCDC38-201ENST00000344280 NUP133Q8WUM0 1156 aa24.73■■□□□ 1.55
CCDC38-201ENST00000344280 ZNF652Q9Y2D9 606 aa24.73■■□□□ 1.55
CCDC38-201ENST00000344280 CICQ96RK0 1608 aaPredicted RBP24.72■■□□□ 1.55
CCDC38-201ENST00000344280 CYP2D7A0A087X1C5 515 aa24.72■■□□□ 1.55
CCDC38-201ENST00000344280 SART3Q15020 963 aaKnown RBP24.72■■□□□ 1.55
CCDC38-201ENST00000344280 DIS3L2Q8IYB7 885 aaKnown RBP24.72■■□□□ 1.55
CCDC38-201ENST00000344280 JMYQ8N9B5 988 aa24.72■■□□□ 1.55
CCDC38-201ENST00000344280 ZNF384Q8TF68 577 aa24.72■■□□□ 1.55
CCDC38-201ENST00000344280 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.72■■□□□ 1.55
CCDC38-201ENST00000344280 DYNLL1P63167 89 aaKnown RBP24.72■■□□□ 1.55
CCDC38-201ENST00000344280 GRIN1Q05586 938 aa24.72■■□□□ 1.55
CCDC38-201ENST00000344280 CELF1Q92879 486 aaKnown RBP24.72■■□□□ 1.55
CCDC38-201ENST00000344280 TIGD1Q96MW7 591 aa24.72■■□□□ 1.55
CCDC38-201ENST00000344280 RIOK1Q9BRS2 568 aaKnown RBP24.72■■□□□ 1.55
CCDC38-201ENST00000344280 MAGEB6P1A0A0J9YX57 407 aa24.71■■□□□ 1.55
CCDC38-201ENST00000344280 CCZ1BP86790 482 aa24.71■■□□□ 1.55
CCDC38-201ENST00000344280 CCZ1P86791 482 aaPredicted RBP24.71■■□□□ 1.55
CCDC38-201ENST00000344280 CHAF1AQ13111 956 aaPredicted RBP24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms