RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 JDP2Q8WYK2 163 aa17.4■□□□□ 0.38
CXCL12-201ENST00000343575 LARP6Q9BRS8 491 aaKnown RBP17.4■□□□□ 0.38
CXCL12-201ENST00000343575 PDRG1Q9NUG6 133 aa17.4■□□□□ 0.38
CXCL12-201ENST00000343575 ANAPC4Q9UJX5 808 aa17.4■□□□□ 0.38
CXCL12-201ENST00000343575 NEDD4P46934 1319 aa17.4■□□□□ 0.38
CXCL12-201ENST00000343575 FZD9O00144 591 aa17.39■□□□□ 0.38
CXCL12-201ENST00000343575 TOB2Q14106 344 aaPredicted RBP17.39■□□□□ 0.38
CXCL12-201ENST00000343575 MB21D2Q8IYB1 491 aaPredicted RBP17.39■□□□□ 0.38
CXCL12-201ENST00000343575 CHMP5Q9NZZ3 219 aa17.39■□□□□ 0.38
CXCL12-201ENST00000343575 SERPINA10Q9UK55 444 aa17.39■□□□□ 0.38
CXCL12-201ENST00000343575 WDHD1O75717 1129 aaPredicted RBP17.39■□□□□ 0.37
CXCL12-201ENST00000343575 USP17L8P0C7I0 530 aa17.39■□□□□ 0.37
CXCL12-201ENST00000343575 CYP2D6P10635 497 aa17.39■□□□□ 0.37
CXCL12-201ENST00000343575 SBK1Q52WX2 424 aa17.39■□□□□ 0.37
CXCL12-201ENST00000343575 CDC42EP5Q6NZY7 148 aa17.39■□□□□ 0.37
CXCL12-201ENST00000343575 ARHGAP27Q6ZUM4 889 aa17.39■□□□□ 0.37
CXCL12-201ENST00000343575 CERS3Q8IU89 383 aa17.39■□□□□ 0.37
CXCL12-201ENST00000343575 NOL10Q9BSC4 688 aaKnown RBP17.39■□□□□ 0.37
CXCL12-201ENST00000343575 ALDH8A1Q9H2A2 487 aaPredicted RBP17.39■□□□□ 0.37
CXCL12-201ENST00000343575 SLKQ9H2G2 1235 aaPredicted RBP17.39■□□□□ 0.37
CXCL12-201ENST00000343575 FOCADQ5VW36 1801 aa17.39■□□□□ 0.37
CXCL12-201ENST00000343575 DDX60LQ5H9U9 1706 aaKnown RBP17.39■□□□□ 0.37
CXCL12-201ENST00000343575 SBF1O95248 1867 aa17.38■□□□□ 0.37
CXCL12-201ENST00000343575 PLCG2P16885 1265 aa17.38■□□□□ 0.37
CXCL12-201ENST00000343575 MCM4P33991 863 aa17.38■□□□□ 0.37
CXCL12-201ENST00000343575 ANTXR2P58335 489 aa17.38■□□□□ 0.37
CXCL12-201ENST00000343575 CIAPIN1Q6FI81 312 aa17.38■□□□□ 0.37
CXCL12-201ENST00000343575 NOL8Q76FK4 1167 aaKnown RBP17.38■□□□□ 0.37
CXCL12-201ENST00000343575 DHX32Q7L7V1 743 aaKnown RBP17.38■□□□□ 0.37
CXCL12-201ENST00000343575 MAPKAPK5Q8IW41 473 aa17.38■□□□□ 0.37
CXCL12-201ENST00000343575 TEX11Q8IYF3 940 aa17.38■□□□□ 0.37
CXCL12-201ENST00000343575 STAG1Q8WVM7 1258 aa17.38■□□□□ 0.37
CXCL12-201ENST00000343575 DDX4Q9NQI0 724 aaKnown RBP17.38■□□□□ 0.37
CXCL12-201ENST00000343575 MYO3BQ8WXR4 1341 aa17.38■□□□□ 0.37
CXCL12-201ENST00000343575 MINDY4BA8MYZ0 360 aa17.37■□□□□ 0.37
CXCL12-201ENST00000343575 FGRP09769 529 aa17.37■□□□□ 0.37
CXCL12-201ENST00000343575 AKNAD1Q5T1N1 836 aa17.37■□□□□ 0.37
CXCL12-201ENST00000343575 CHST3Q7LGC8 479 aa17.37■□□□□ 0.37
CXCL12-201ENST00000343575 TMX3Q96JJ7 454 aa17.37■□□□□ 0.37
CXCL12-201ENST00000343575 LRRC2Q9BYS8 371 aa17.37■□□□□ 0.37
CXCL12-201ENST00000343575 FLT1P17948 1338 aa17.37■□□□□ 0.37
CXCL12-201ENST00000343575 HMGB1P09429 215 aaKnown RBP17.37■□□□□ 0.37
CXCL12-201ENST00000343575 CLCN1P35523 988 aa17.37■□□□□ 0.37
CXCL12-201ENST00000343575 USP5P45974 858 aa17.37■□□□□ 0.37
CXCL12-201ENST00000343575 CYB5R4Q7L1T6 521 aa17.37■□□□□ 0.37
CXCL12-201ENST00000343575 AGBL3Q8NEM8 1001 aa17.37■□□□□ 0.37
CXCL12-201ENST00000343575 NCOA7Q8NI08 942 aa17.37■□□□□ 0.37
CXCL12-201ENST00000343575 PRMT6Q96LA8 375 aaPredicted RBP17.37■□□□□ 0.37
CXCL12-201ENST00000343575 AGXT2Q9BYV1 514 aa17.37■□□□□ 0.37
CXCL12-201ENST00000343575 USP40Q9NVE5 1235 aa17.37■□□□□ 0.37
CXCL12-201ENST00000343575 MCM9Q9NXL9 1143 aa17.37■□□□□ 0.37
CXCL12-201ENST00000343575 SHTN1A0MZ66 631 aa17.36■□□□□ 0.37
CXCL12-201ENST00000343575 SOCS7O14512 581 aa17.36■□□□□ 0.37
CXCL12-201ENST00000343575 LARGE1O95461 756 aa17.36■□□□□ 0.37
CXCL12-201ENST00000343575 PTMSP20962 102 aa17.36■□□□□ 0.37
CXCL12-201ENST00000343575 MRE11P49959 708 aa17.36■□□□□ 0.37
CXCL12-201ENST00000343575 NFIAQ12857 509 aa17.36■□□□□ 0.37
CXCL12-201ENST00000343575 C12orf60Q5U649 245 aa17.36■□□□□ 0.37
CXCL12-201ENST00000343575 STK11IPQ8N1F8 1099 aa17.36■□□□□ 0.37
CXCL12-201ENST00000343575 SPRYD3Q8NCJ5 442 aa17.36■□□□□ 0.37
CXCL12-201ENST00000343575 GPHNQ9NQX3 736 aaPredicted RBP17.36■□□□□ 0.37
CXCL12-201ENST00000343575 ARPP21Q9UBL0 812 aaPredicted RBP17.36■□□□□ 0.37
CXCL12-201ENST00000343575 TPCN1Q9ULQ1 816 aa17.36■□□□□ 0.37
CXCL12-201ENST00000343575 NAV1Q8NEY1 1877 aa17.36■□□□□ 0.37
CXCL12-201ENST00000343575 LAMB1P07942 1786 aa17.35■□□□□ 0.37
CXCL12-201ENST00000343575 ECM29Q5VYK3 1845 aa17.35■□□□□ 0.37
CXCL12-201ENST00000343575 DDX11L8A8MPP1 907 aa17.35■□□□□ 0.37
CXCL12-201ENST00000343575 B4E1Z4 1266 aa17.35■□□□□ 0.37
CXCL12-201ENST00000343575 MCM2P49736 904 aa17.35■□□□□ 0.37
CXCL12-201ENST00000343575 PLCD1P51178 756 aa17.35■□□□□ 0.37
CXCL12-201ENST00000343575 SLC4A8Q2Y0W8 1093 aa17.35■□□□□ 0.37
CXCL12-201ENST00000343575 CFAP100Q494V2 611 aa17.35■□□□□ 0.37
CXCL12-201ENST00000343575 DICER1Q9UPY3 1922 aaKnown RBP17.35■□□□□ 0.37
CXCL12-201ENST00000343575 LMNB1P20700 586 aa17.35■□□□□ 0.37
CXCL12-201ENST00000343575 Q6ZUG5 572 aa17.35■□□□□ 0.37
CXCL12-201ENST00000343575 SAP30BPQ9UHR5 308 aaKnown RBP17.35■□□□□ 0.37
CXCL12-201ENST00000343575 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.35■□□□□ 0.37
CXCL12-201ENST00000343575 ZNF541Q9H0D2 1346 aa17.35■□□□□ 0.37
CXCL12-201ENST00000343575 RBM5P52756 815 aaKnown RBP eCLIP17.34■□□□□ 0.37
CXCL12-201ENST00000343575 CACNB3P54284 484 aa17.34■□□□□ 0.37
CXCL12-201ENST00000343575 ST3GAL1Q11201 340 aa17.34■□□□□ 0.37
CXCL12-201ENST00000343575 MFSD6Q6ZSS7 791 aa17.34■□□□□ 0.37
CXCL12-201ENST00000343575 FBXL16Q8N461 479 aa17.34■□□□□ 0.37
CXCL12-201ENST00000343575 ZBED3Q96IU2 234 aaPredicted RBP17.34■□□□□ 0.37
CXCL12-201ENST00000343575 RRAGDQ9NQL2 400 aaPredicted RBP17.34■□□□□ 0.37
CXCL12-201ENST00000343575 ZSWIM5Q9P217 1185 aa17.34■□□□□ 0.37
CXCL12-201ENST00000343575 LIMCH1Q9UPQ0 1083 aa17.34■□□□□ 0.37
CXCL12-201ENST00000343575 MYH1P12882 1939 aa17.34■□□□□ 0.37
CXCL12-201ENST00000343575 CUL4AQ13619 759 aa17.33■□□□□ 0.37
CXCL12-201ENST00000343575 TNIP1Q15025 636 aa17.33■□□□□ 0.37
CXCL12-201ENST00000343575 ME3Q16798 604 aa17.33■□□□□ 0.37
CXCL12-201ENST00000343575 ZFPM1Q8IX07 1006 aa17.33■□□□□ 0.37
CXCL12-201ENST00000343575 DYNLL2Q96FJ2 89 aa17.33■□□□□ 0.37
CXCL12-201ENST00000343575 ROBO3Q96MS0 1386 aa17.33■□□□□ 0.36
CXCL12-201ENST00000343575 SPDYE2BA6NHP3 402 aa17.33■□□□□ 0.36
CXCL12-201ENST00000343575 PRC1O43663 620 aa17.33■□□□□ 0.36
CXCL12-201ENST00000343575 KDM4AO75164 1064 aa17.33■□□□□ 0.36
CXCL12-201ENST00000343575 SPDYE6P0CI01 402 aa17.33■□□□□ 0.36
CXCL12-201ENST00000343575 XRCC6P12956 609 aaKnown RBP eCLIP17.33■□□□□ 0.36
CXCL12-201ENST00000343575 MCM5P33992 734 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms