RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 TCRBV5S4A2TA0A5A2 114 aa21.71■■□□□ 1.07
PSPC1-201ENST00000338910 WTIPA6NIX2 430 aaPredicted RBP21.71■■□□□ 1.07
PSPC1-201ENST00000338910 FOSBP53539 338 aa21.71■■□□□ 1.07
PSPC1-201ENST00000338910 SLC10A5Q5PT55 438 aa21.71■■□□□ 1.07
PSPC1-201ENST00000338910 MAGEB6Q8N7X4 407 aa21.71■■□□□ 1.07
PSPC1-201ENST00000338910 NSUN7Q8NE18 718 aaKnown RBP21.71■■□□□ 1.07
PSPC1-201ENST00000338910 NYXQ9GZU5 481 aa21.71■■□□□ 1.07
PSPC1-201ENST00000338910 CALCOCO1Q9P1Z2 691 aa21.71■■□□□ 1.07
PSPC1-201ENST00000338910 RCOR1Q9UKL0 485 aa21.71■■□□□ 1.07
PSPC1-201ENST00000338910 ERICH4A6NGS2 130 aa21.7■■□□□ 1.06
PSPC1-201ENST00000338910 H3BQV1 296 aa21.7■■□□□ 1.06
PSPC1-201ENST00000338910 IFFO2Q5TF58 517 aa21.7■■□□□ 1.06
PSPC1-201ENST00000338910 NBPF11Q86T75 865 aa21.7■■□□□ 1.06
PSPC1-201ENST00000338910 SMARCC2Q8TAQ2 1214 aa21.7■■□□□ 1.06
PSPC1-201ENST00000338910 AIDAQ96BJ3 306 aa21.7■■□□□ 1.06
PSPC1-201ENST00000338910 LLPHQ9BRT6 129 aaKnown RBP21.7■■□□□ 1.06
PSPC1-201ENST00000338910 ANO10Q9NW15 660 aa21.7■■□□□ 1.06
PSPC1-201ENST00000338910 IQSEC3Q9UPP2 1182 aaPredicted RBP21.7■■□□□ 1.06
PSPC1-201ENST00000338910 MYO5AQ9Y4I1 1855 aaKnown RBP21.7■■□□□ 1.06
PSPC1-201ENST00000338910 C4BP0C0L5 1744 aa21.7■■□□□ 1.06
PSPC1-201ENST00000338910 PRC1O43663 620 aa21.7■■□□□ 1.06
PSPC1-201ENST00000338910 ERCC6LQ2NKX8 1250 aa21.7■■□□□ 1.06
PSPC1-201ENST00000338910 E4F1Q66K89 784 aaPredicted RBP21.7■■□□□ 1.06
PSPC1-201ENST00000338910 NCOA7Q8NI08 942 aa21.7■■□□□ 1.06
PSPC1-201ENST00000338910 CEBPZQ03701 1054 aaKnown RBP21.69■■□□□ 1.06
PSPC1-201ENST00000338910 MAP3K12Q12852 859 aa21.69■■□□□ 1.06
PSPC1-201ENST00000338910 CCDC93Q567U6 631 aa21.69■■□□□ 1.06
PSPC1-201ENST00000338910 TPTE2Q6XPS3 522 aa21.69■■□□□ 1.06
PSPC1-201ENST00000338910 RALYLQ86SE5 291 aaKnown RBP21.69■■□□□ 1.06
PSPC1-201ENST00000338910 CELF1Q92879 486 aaKnown RBP21.69■■□□□ 1.06
PSPC1-201ENST00000338910 ZNF274Q96GC6 653 aaPredicted RBP21.69■■□□□ 1.06
PSPC1-201ENST00000338910 FHOD1Q9Y613 1164 aa21.69■■□□□ 1.06
PSPC1-201ENST00000338910 MYH15Q9Y2K3 1946 aa21.69■■□□□ 1.06
PSPC1-201ENST00000338910 MYH7P12883 1935 aa21.69■■□□□ 1.06
PSPC1-201ENST00000338910 A0A087WWV3 80 aa21.69■■□□□ 1.06
PSPC1-201ENST00000338910 PTPDC1A2A3K4 754 aa21.69■■□□□ 1.06
PSPC1-201ENST00000338910 KRT27Q7Z3Y8 459 aa21.69■■□□□ 1.06
PSPC1-201ENST00000338910 MB21D2Q8IYB1 491 aaPredicted RBP21.69■■□□□ 1.06
PSPC1-201ENST00000338910 ENGASEQ8NFI3 743 aa21.69■■□□□ 1.06
PSPC1-201ENST00000338910 STRBPQ96SI9 672 aaKnown RBP21.69■■□□□ 1.06
PSPC1-201ENST00000338910 DENND2AQ9ULE3 1009 aa21.69■■□□□ 1.06
PSPC1-201ENST00000338910 NPHP1O15259 732 aa21.68■■□□□ 1.06
PSPC1-201ENST00000338910 CYP2C19P33261 490 aa21.68■■□□□ 1.06
PSPC1-201ENST00000338910 NLRP3Q96P20 1036 aa21.68■■□□□ 1.06
PSPC1-201ENST00000338910 NOL10Q9BSC4 688 aaKnown RBP21.68■■□□□ 1.06
PSPC1-201ENST00000338910 NBPF3Q9H094 633 aa21.68■■□□□ 1.06
PSPC1-201ENST00000338910 IMPACTQ9P2X3 320 aa21.68■■□□□ 1.06
PSPC1-201ENST00000338910 TRIM37O94972 964 aa21.68■■□□□ 1.06
PSPC1-201ENST00000338910 CEP57L1Q8IYX8 460 aa21.68■■□□□ 1.06
PSPC1-201ENST00000338910 AOPEPQ8N6M6 819 aa21.68■■□□□ 1.06
PSPC1-201ENST00000338910 BSDC1Q9NW68 430 aaPredicted RBP21.68■■□□□ 1.06
PSPC1-201ENST00000338910 ARAP2Q8WZ64 1704 aa21.68■■□□□ 1.06
PSPC1-201ENST00000338910 TULP2O00295 520 aa21.67■■□□□ 1.06
PSPC1-201ENST00000338910 ANTXR2P58335 489 aa21.67■■□□□ 1.06
PSPC1-201ENST00000338910 CCDC73Q6ZRK6 1079 aa21.67■■□□□ 1.06
PSPC1-201ENST00000338910 LRRN4CLQ8ND94 238 aa21.67■■□□□ 1.06
PSPC1-201ENST00000338910 PPP1R13BQ96KQ4 1090 aa21.67■■□□□ 1.06
PSPC1-201ENST00000338910 FTOQ9C0B1 505 aaKnown RBP eCLIP21.67■■□□□ 1.06
PSPC1-201ENST00000338910 KINO60870 393 aaKnown RBP21.67■■□□□ 1.06
PSPC1-201ENST00000338910 CLCN6P51797 869 aa21.67■■□□□ 1.06
PSPC1-201ENST00000338910 CASZ1Q86V15 1759 aa21.67■■□□□ 1.06
PSPC1-201ENST00000338910 MBD4O95243 580 aa21.66■■□□□ 1.06
PSPC1-201ENST00000338910 GYG1P46976 350 aa21.66■■□□□ 1.06
PSPC1-201ENST00000338910 FAM160A1Q05DH4 1040 aa21.66■■□□□ 1.06
PSPC1-201ENST00000338910 RAB11FIP4Q86YS3 637 aa21.66■■□□□ 1.06
PSPC1-201ENST00000338910 TBC1D10CQ8IV04 446 aa21.66■■□□□ 1.06
PSPC1-201ENST00000338910 FBXL16Q8N461 479 aa21.66■■□□□ 1.06
PSPC1-201ENST00000338910 NKX2-3Q8TAU0 364 aa21.66■■□□□ 1.06
PSPC1-201ENST00000338910 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.66■■□□□ 1.06
PSPC1-201ENST00000338910 PSDA5PKW4 1024 aaPredicted RBP21.66■■□□□ 1.06
PSPC1-201ENST00000338910 TRDNQ13061 729 aa21.66■■□□□ 1.06
PSPC1-201ENST00000338910 ARMT1Q9H993 441 aa21.66■■□□□ 1.06
PSPC1-201ENST00000338910 LRP2BPQ9P2M1 347 aa21.66■■□□□ 1.06
PSPC1-201ENST00000338910 MINPP1Q9UNW1 487 aa21.66■■□□□ 1.06
PSPC1-201ENST00000338910 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.65■■□□□ 1.06
PSPC1-201ENST00000338910 KLF18A0A0U1RQI7 1052 aa21.65■■□□□ 1.06
PSPC1-201ENST00000338910 KCNJ6P48051 423 aa21.65■■□□□ 1.06
PSPC1-201ENST00000338910 SLC20A2Q08357 652 aa21.65■■□□□ 1.06
PSPC1-201ENST00000338910 NAA16Q6N069 864 aaPredicted RBP21.65■■□□□ 1.06
PSPC1-201ENST00000338910 C4AP0C0L4 1744 aa21.65■■□□□ 1.06
PSPC1-201ENST00000338910 BRWD3Q6RI45 1802 aa21.65■■□□□ 1.06
PSPC1-201ENST00000338910 PNMA6AP0CW24 399 aaPredicted RBP21.65■■□□□ 1.06
PSPC1-201ENST00000338910 EVCP57679 992 aa21.65■■□□□ 1.06
PSPC1-201ENST00000338910 SYT10Q6XYQ8 523 aa21.65■■□□□ 1.06
PSPC1-201ENST00000338910 NAT10Q9H0A0 1025 aaKnown RBP21.65■■□□□ 1.06
PSPC1-201ENST00000338910 INCENPQ9NQS7 918 aa21.65■■□□□ 1.06
PSPC1-201ENST00000338910 COL24A1Q17RW2 1714 aa21.64■■□□□ 1.06
PSPC1-201ENST00000338910 CDK11BP21127 795 aaKnown RBP21.64■■□□□ 1.05
PSPC1-201ENST00000338910 USP28Q96RU2 1077 aa21.64■■□□□ 1.05
PSPC1-201ENST00000338910 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.64■■□□□ 1.054e-8■■■□□ 19.1
PSPC1-201ENST00000338910 PATL2C9JE40 543 aaKnown RBP21.64■■□□□ 1.05
PSPC1-201ENST00000338910 RPS8P62241 208 aaKnown RBP21.64■■□□□ 1.05
PSPC1-201ENST00000338910 NFIXQ14938 502 aa21.64■■□□□ 1.05
PSPC1-201ENST00000338910 ARMCX5Q6P1M9 558 aa21.64■■□□□ 1.05
PSPC1-201ENST00000338910 CCDC150Q8NCX0 1101 aa21.64■■□□□ 1.05
PSPC1-201ENST00000338910 PLA2G4AP47712 749 aa21.63■■□□□ 1.05
PSPC1-201ENST00000338910 GUCY1B3Q02153 619 aa21.63■■□□□ 1.05
PSPC1-201ENST00000338910 IFNL3Q8IZI9 196 aa21.63■■□□□ 1.05
PSPC1-201ENST00000338910 ABCF2Q9UG63 623 aa21.63■■□□□ 1.05
PSPC1-201ENST00000338910 PRKAB2O43741 272 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms