RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 CTDSPL2Q05D32 466 aa22.53■■□□□ 1.2
CHMP6-201ENST00000325167 CERS3Q8IU89 383 aa22.53■■□□□ 1.2
CHMP6-201ENST00000325167 ESR2Q92731 530 aa22.53■■□□□ 1.2
CHMP6-201ENST00000325167 C8orf76Q96K31 380 aa22.53■■□□□ 1.2
CHMP6-201ENST00000325167 CRAMP1Q96RY5 1269 aa22.53■■□□□ 1.2
CHMP6-201ENST00000325167 ZSWIM5Q9P217 1185 aa22.53■■□□□ 1.2
CHMP6-201ENST00000325167 CHD4Q14839 1912 aa22.53■■□□□ 1.2
CHMP6-201ENST00000325167 DTNBO60941 627 aa22.52■■□□□ 1.2
CHMP6-201ENST00000325167 GSTO1P78417 241 aa22.52■■□□□ 1.2
CHMP6-201ENST00000325167 CCDC173Q0VFZ6 552 aa22.52■■□□□ 1.2
CHMP6-201ENST00000325167 ADGRA1Q86SQ6 560 aa22.52■■□□□ 1.2
CHMP6-201ENST00000325167 PANK2Q9BZ23 570 aa22.52■■□□□ 1.2
CHMP6-201ENST00000325167 ATP8A2Q9NTI2 1148 aa22.52■■□□□ 1.2
CHMP6-201ENST00000325167 SLC12A7Q9Y666 1083 aa22.52■■□□□ 1.2
CHMP6-201ENST00000325167 FDPSP14324 419 aaKnown RBP22.52■■□□□ 1.2
CHMP6-201ENST00000325167 KLRK1P26718 216 aa22.52■■□□□ 1.2
CHMP6-201ENST00000325167 MECOMQ03112 1051 aa22.52■■□□□ 1.2
CHMP6-201ENST00000325167 PPP2R5BQ15173 497 aa22.52■■□□□ 1.2
CHMP6-201ENST00000325167 CCDC196A0A1B0GTZ2 297 aa22.51■■□□□ 1.19
CHMP6-201ENST00000325167 KLRG2A4D1S0 409 aaPredicted RBP22.51■■□□□ 1.19
CHMP6-201ENST00000325167 WTIPA6NIX2 430 aaPredicted RBP22.51■■□□□ 1.19
CHMP6-201ENST00000325167 SLC3A2P08195 630 aaKnown RBP22.51■■□□□ 1.19
CHMP6-201ENST00000325167 BRAPQ7Z569 592 aa22.51■■□□□ 1.19
CHMP6-201ENST00000325167 TDRD7Q8NHU6 1098 aaKnown RBP22.51■■□□□ 1.19
CHMP6-201ENST00000325167 UTRNP46939 3433 aa22.51■■□□□ 1.19
CHMP6-201ENST00000325167 STK36Q9NRP7 1315 aa22.5■■□□□ 1.19
CHMP6-201ENST00000325167 GOLGA8AA7E2F4 631 aa22.5■■□□□ 1.19
CHMP6-201ENST00000325167 CHAF1AQ13111 956 aaPredicted RBP22.5■■□□□ 1.19
CHMP6-201ENST00000325167 WTAPQ15007 396 aa22.5■■□□□ 1.19
CHMP6-201ENST00000325167 COL23A1Q86Y22 540 aaPredicted RBP22.5■■□□□ 1.19
CHMP6-201ENST00000325167 DZIP1Q86YF9 867 aaKnown RBP22.5■■□□□ 1.19
CHMP6-201ENST00000325167 NLGN1Q8N2Q7 840 aa22.5■■□□□ 1.19
CHMP6-201ENST00000325167 FBXO18Q8NFZ0 1043 aa22.5■■□□□ 1.19
CHMP6-201ENST00000325167 WASF1Q92558 559 aa22.5■■□□□ 1.19
CHMP6-201ENST00000325167 SYT17Q9BSW7 474 aa22.5■■□□□ 1.19
CHMP6-201ENST00000325167 TOMM22Q9NS69 142 aa22.5■■□□□ 1.19
CHMP6-201ENST00000325167 POLRMTO00411 1230 aaKnown RBP22.49■■□□□ 1.19
CHMP6-201ENST00000325167 SLC16A10Q8TF71 515 aa22.49■■□□□ 1.19
CHMP6-201ENST00000325167 UBAC1Q9BSL1 405 aa22.49■■□□□ 1.19
CHMP6-201ENST00000325167 DDX19AQ9NUU7 478 aaKnown RBP22.49■■□□□ 1.19
CHMP6-201ENST00000325167 PODXL2Q9NZ53 605 aa22.49■■□□□ 1.19
CHMP6-201ENST00000325167 GGA1Q9UJY5 639 aa22.49■■□□□ 1.19
CHMP6-201ENST00000325167 LDHCP07864 332 aa22.49■■□□□ 1.19
CHMP6-201ENST00000325167 FGRP09769 529 aa22.49■■□□□ 1.19
CHMP6-201ENST00000325167 FAM173BQ6P4H8 233 aa22.49■■□□□ 1.19
CHMP6-201ENST00000325167 SDR42E1Q8WUS8 393 aa22.49■■□□□ 1.19
CHMP6-201ENST00000325167 RBSNQ9H1K0 784 aa22.49■■□□□ 1.19
CHMP6-201ENST00000325167 RCOR1Q9UKL0 485 aa22.49■■□□□ 1.19
CHMP6-201ENST00000325167 KIAA1551Q9HCM1 1747 aa22.48■■□□□ 1.19
CHMP6-201ENST00000325167 MINDY4BA8MYZ0 360 aa22.48■■□□□ 1.19
CHMP6-201ENST00000325167 LDHBP07195 334 aaKnown RBP22.48■■□□□ 1.19
CHMP6-201ENST00000325167 RRP12Q5JTH9 1297 aaKnown RBP22.48■■□□□ 1.19
CHMP6-201ENST00000325167 TFIP11Q9UBB9 837 aaKnown RBP22.48■■□□□ 1.19
CHMP6-201ENST00000325167 ARPP21Q9UBL0 812 aaPredicted RBP22.48■■□□□ 1.19
CHMP6-201ENST00000325167 CCDC88AQ3V6T2 1871 aa22.47■■□□□ 1.19
CHMP6-201ENST00000325167 DYNLL1P63167 89 aaKnown RBP22.47■■□□□ 1.19
CHMP6-201ENST00000325167 SBK1Q52WX2 424 aa22.47■■□□□ 1.19
CHMP6-201ENST00000325167 MICU3Q86XE3 530 aa22.47■■□□□ 1.19
CHMP6-201ENST00000325167 ZNF384Q8TF68 577 aa22.47■■□□□ 1.19
CHMP6-201ENST00000325167 PPP1R9BQ96SB3 815 aa22.47■■□□□ 1.19
CHMP6-201ENST00000325167 IARSP41252 1262 aaKnown RBP22.46■■□□□ 1.19
CHMP6-201ENST00000325167 DDR1Q08345 913 aa22.46■■□□□ 1.19
CHMP6-201ENST00000325167 UVSSAQ2YD98 709 aa22.46■■□□□ 1.19
CHMP6-201ENST00000325167 NOL10Q9BSC4 688 aaKnown RBP22.46■■□□□ 1.19
CHMP6-201ENST00000325167 DCAF8L1A6NGE4 600 aa22.46■■□□□ 1.19
CHMP6-201ENST00000325167 BAG3O95817 575 aa22.46■■□□□ 1.19
CHMP6-201ENST00000325167 POLD1P28340 1107 aa22.46■■□□□ 1.19
CHMP6-201ENST00000325167 PRDX5P30044 214 aa22.46■■□□□ 1.19
CHMP6-201ENST00000325167 ADD1P35611 737 aaKnown RBP22.46■■□□□ 1.19
CHMP6-201ENST00000325167 GPSM2P81274 684 aa22.46■■□□□ 1.19
CHMP6-201ENST00000325167 TRIM29Q14134 588 aa22.46■■□□□ 1.19
CHMP6-201ENST00000325167 MSL1Q68DK7 614 aa22.46■■□□□ 1.19
CHMP6-201ENST00000325167 TXNRD3Q86VQ6 643 aa22.46■■□□□ 1.19
CHMP6-201ENST00000325167 IQCA1Q86XH1 822 aa22.46■■□□□ 1.19
CHMP6-201ENST00000325167 UFL1O94874 794 aa22.45■■□□□ 1.18
CHMP6-201ENST00000325167 IFNAR1P17181 557 aa22.45■■□□□ 1.18
CHMP6-201ENST00000325167 SSRP1Q08945 709 aaKnown RBP22.45■■□□□ 1.18
CHMP6-201ENST00000325167 TRIM22Q8IYM9 498 aa22.45■■□□□ 1.18
CHMP6-201ENST00000325167 ALG1Q9BT22 464 aa22.45■■□□□ 1.18
CHMP6-201ENST00000325167 NUP62CLQ9H1M0 184 aa22.45■■□□□ 1.18
CHMP6-201ENST00000325167 MYH15Q9Y2K3 1946 aa22.45■■□□□ 1.18
CHMP6-201ENST00000325167 ORC4O43929 436 aa22.44■■□□□ 1.18
CHMP6-201ENST00000325167 IL1R1P14778 569 aa22.44■■□□□ 1.18
CHMP6-201ENST00000325167 RTN1Q16799 776 aa22.44■■□□□ 1.18
CHMP6-201ENST00000325167 CTR9Q6PD62 1173 aa22.44■■□□□ 1.18
CHMP6-201ENST00000325167 BICD2Q8TD16 824 aa22.44■■□□□ 1.18
CHMP6-201ENST00000325167 TRIM44Q96DX7 344 aaPredicted RBP22.44■■□□□ 1.18
CHMP6-201ENST00000325167 AATFQ9NY61 560 aaKnown RBP eCLIP22.44■■□□□ 1.18
CHMP6-201ENST00000325167 TACC3Q9Y6A5 838 aa22.44■■□□□ 1.18
CHMP6-201ENST00000325167 NTRK3Q16288 839 aa22.43■■□□□ 1.18
CHMP6-201ENST00000325167 SLF2Q8IX21 1173 aa22.43■■□□□ 1.18
CHMP6-201ENST00000325167 SP8Q8IXZ3 490 aa22.43■■□□□ 1.18
CHMP6-201ENST00000325167 AMOTL1Q8IY63 956 aa22.43■■□□□ 1.18
CHMP6-201ENST00000325167 TBC1D22AQ8WUA7 517 aa22.43■■□□□ 1.18
CHMP6-201ENST00000325167 DCP1AQ9NPI6 582 aaPredicted RBP22.43■■□□□ 1.18
CHMP6-201ENST00000325167 RTEL1Q9NZ71 1219 aa22.43■■□□□ 1.18
CHMP6-201ENST00000325167 FMNL1O95466 1100 aaPredicted RBP22.42■■□□□ 1.18
CHMP6-201ENST00000325167 YEATS4O95619 227 aa22.42■■□□□ 1.18
CHMP6-201ENST00000325167 CALM1P0DP23 149 aa22.42■■□□□ 1.18
CHMP6-201ENST00000325167 CALM2P0DP24 149 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms